BAC Information

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BAC

Clone NameB6Ng01-124A09
Chromosome15 (Build37)
Map Location 41,105,582 - 41,256,415
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC670013, LOC664872, Zfpm2, Ppia-ps25
Downstream geneOxr1, Abra, EG432946, LOC432947, LOC100039268, LOC100039197, Angpt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124A09.bB6Ng01-124A09.g
ACCDH927037DH927038
length1,0691,073
definitionDH927037|Mus musculus domesticus DNA, BAC clone: B6Ng01-124A09, 5' end.DH927038|Mus musculus domesticus DNA, BAC clone: B6Ng01-124A09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,105,582 - 41,106,664)(41,255,326 - 41,256,415)
sequence
gaattctcaactgaggaaactcaaatgactttgaagcacctaaagaaatg
ttcaacatccttagtcatcagggaaatgcaaatcaaaactaccttgaaat
tctacctcacaccaattggaatgactaagaccaaaaactcaagtgaaagc
agatgccggtgaggatgtcgagaaagaggaacactcctccattgctggtg
ggattggaagctggtacaaccactctggtgtgagatagaatctctcgact
tgtatttagaccagtaaaagaaataccaattttctaaataccttacaagt
caagagtaaatgttgatatcttcatctttgtgtaagtttagcacaagtgc
ctgtatttgtgtattgtataaggagatgcaacctaaaatagtaaagaaaa
cctaccaagcatcagatacttctaggcaggtgtaatttagtatctgaata
gatcagctccatacagaaatatttttctttgaacaaaattactctcagaa
aaattgaaacaaatgaacaaaaatatctttcactattggattaacttaca
gtgaaatttaatgttctccctcaaattggcagaacttgcggtgtacatgg
gaaataacgatcttgctctcaggaactctgacaatgatgaatgttgcatc
tttaagcatgtgagcccttacatgtgtgtggctgcacacagcttcctgac
tctccagatgtccaataaagcaatgactttgtatgcttttgttcctttca
tttgatgattctgaaaagactttttggatagggacattgtaccaaactga
taccaggtagtggatttcaaagtgatgtcatcactgcagggaaaggctga
gcactctcaaaatatggctttcagatagatgctcaaggcttctacagtct
tagaacacacacaaagggagcctaattagcatgcctgagttatagtcttg
tatcaccatgattcacaggttaaattaaattagacagcacccaattgctc
agctgttggaagaacccgatgtacaacagtgagaggaataaaacagcact
gaagaacaactggatggct
gaattctcttagtttgtgttttatttattgcttttatttccattttcaga
tcttggacagttttatttatttcctccaactgtttatatgttcttggaat
atacaagggaattcattcatttcctttaattgcttagttgtgtttcttgg
attattttggagtatttattcattaattctgtgtaagacttctaccttct
tcatatagtgggttttgagaaatttttcttttccttcagctatgttggaa
tattcagggcctgctgcattaggctagccatgccctacaagggacataat
ttgctgttctttcttttttttttttttttttaacgttgctatccagaatt
tggatttgagatgattataggtctaggtgctgatttctaggtgtatttgc
tgaatgtgtgttttatagacacattttttgagagctgtactgtatatttt
atttgttcacatgcaatttttgggtcttttatgtattcaaagatagttat
tatggtttacctttcaaattttttcttctatctttctggagtacagggta
gggactttgaatcatgtgatcttaatccttgtgatgattaaggtaaagta
aactataaaatgattaaatttctaaaagatcattaatgaaaatgtacata
accttatatctggtaataactttcttgatgtagtagaacaggcaaaaaga
aataatttaaaaataggaattcattaaaactcctgaagtaaaacaagaaa
gcaaatcatgggatagaagaaaacaaatatgaagacatatctggataata
actcatccaatgtttataaagtacatataaatgccaatagtaaagaaaat
atgggttaataaatgagaaaaaagactaaaaatgcagctgtcaaaaggaa
tattaaaacaccaaattttaaaagagtaaagatttttgatgttgcaagta
attattgaacagaaaaaaccaccaacaaacattaatagccctatattctg
ctcatatcttaaatacataactgaaatgtcatggcagccgggaatggggc
aatggaatttctccctttgctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_41105582_41106664
seq2: B6Ng01-124A09.b_39_1107

seq1  GAATTCTCAACTGAGGAAACTCAAATGACTGAGAAGCACCTAAAGAAATG  50
      ||||||||||||||||||||||||||||||  ||||||||||||||||||
seq2  GAATTCTCAACTGAGGAAACTCAAATGACTTTGAAGCACCTAAAGAAATG  50

seq1  TTCAACATCCTTAGTCATCAGGGAAATGCAAATCAAAACTACCTTGAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAGTCATCAGGGAAATGCAAATCAAAACTACCTTGAAAT  100

seq1  TCTACCTCACACCAATTGGAATGACTAAGACCAAAAACTCAAGTGAAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTCACACCAATTGGAATGACTAAGACCAAAAACTCAAGTGAAAGC  150

seq1  AGATGCCGGTGAGGATGTCGAGAAAGAGGAACACTCCTCCATTGCTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCGGTGAGGATGTCGAGAAAGAGGAACACTCCTCCATTGCTGGTG  200

seq1  GGATTGGAAGCTGGTACAACCACTCTGGTGTGAGATAGAATCTCTCGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGAAGCTGGTACAACCACTCTGGTGTGAGATAGAATCTCTCGACT  250

seq1  TGTATTTAGACCAGTAAAAGAAATACCAATTTTCTAAATACCTTACAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTAGACCAGTAAAAGAAATACCAATTTTCTAAATACCTTACAAGT  300

seq1  CAAGAGTAAATGTTGATATCTTCATCTTTGTGTAAGTTTAGCACAAGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTAAATGTTGATATCTTCATCTTTGTGTAAGTTTAGCACAAGTGC  350

seq1  CTGTATTTGTGTATTGTATAAGGAGATGCAACCTAAAATAGTAAAGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTTGTGTATTGTATAAGGAGATGCAACCTAAAATAGTAAAGAAAA  400

seq1  CCTACCAAGCATCAGATACTTCTAGGCAGGTGTAATTTAGTATCTGAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCAAGCATCAGATACTTCTAGGCAGGTGTAATTTAGTATCTGAATA  450

seq1  GATCAGCTCCATACAGAAATATTTTTCTTTGAACAAAATTACTCTCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGCTCCATACAGAAATATTTTTCTTTGAACAAAATTACTCTCAGAA  500

seq1  AAATTGAAACAAATGAACAAAAATATCTTTCACTATTGGATTAACTTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAAACAAATGAACAAAAATATCTTTCACTATTGGATTAACTTACA  550

seq1  GTGAAATTTAATGTTCTCCCTCAAATTGGCAGAACTTGCGGTGTACATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATTTAATGTTCTCCCTCAAATTGGCAGAACTTGCGGTGTACATGG  600

seq1  GAAATAACGATCTTGCTCTCAGGAACTCTGACAATGATGAATGTTGCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAACGATCTTGCTCTCAGGAACTCTGACAATGATGAATGTTGCATC  650

seq1  TTTAAGCATGTGAGCCCTTACATGTGTGTGGCTGCACACAGCTTCCTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCATGTGAGCCCTTACATGTGTGTGGCTGCACACAGCTTCCTGAC  700

seq1  TCTCCAGATGTCCAATAAAGCAATGACTTTGTATGCTTTTGTTCCTTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGATGTCCAATAAAGCAATGACTTTGTATGCTTTTGTTCCTTTCA  750

seq1  TTTGATGATTCTGAAAAGACTTTTTGGATAGGGACATTGTACCAAACTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGATTCTGAAAAGACTTTTTGGATAGGGACATTGTACCAAACTGA  800

seq1  TACCAGGTAGTGGATTTCAAAGTGATGTCATCACTGCAGGGAAAGGCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGGTAGTGGATTTCAAAGTGATGTCATCACTGCAGGGAAAGGCTGA  850

seq1  GCACTCTCAAAATATGGCTTTCAGATAGATGCTCAAGGCTTCTACAGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCTCAAAATATGGCTTTCAGATAGATGCTCAAGGCTTCTACAGTCT  900

seq1  TAGAACACACACAAAGGGAGCCTAATTAGCATGCCTGAGTTATAGATCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TAGAACACACACAAAGGGAGCCTAATTAGCATGCCTGAGTTATAG-TCTT  949

seq1  GTAATCACCATGATTCACAGGTTAAATTAAAATTAAGAACAGCACACAAT  1000
      || ||||||||||||||||||||||||| ||||||   ||||||| ||||
seq2  GT-ATCACCATGATTCACAGGTTAAATT-AAATTA--GACAGCACCCAAT  995

seq1  TGCTCAGCTGTTGAAAGAACACAGATGTAACAAACAGTGAGGAAGGAATA  1050
      ||||||||||||| |||||| | ||||||   |||||||||  |||||| 
seq2  TGCTCAGCTGTTGGAAGAAC-CCGATGTA--CAACAGTGAG--AGGAAT-  1039

seq1  AAAACAGCAACTGAAAGAACAAACTGGATGGCT  1083
      |||||||| |||| |||||| ||||||||||||
seq2  AAAACAGC-ACTG-AAGAAC-AACTGGATGGCT  1069

seq1: chr15_41255326_41256415
seq2: B6Ng01-124A09.g_69_1141 (reverse)

seq1  TTAGCTAAAGGATGAGAATTTCCATTGCGCCATCTCCTGGCCTGCATTTG  50
      ||||| |||||  ||||| ||||||||| |||| ||| |||   ||  ||
seq2  TTAGC-AAAGG--GAGAAATTCCATTGCCCCAT-TCCCGGCTGCCA--TG  44

seq1  ACATTTTCAGTATTTGATTTTAGATATGTGAGCAAGATTATAGGGCTATT  100
      ||| |||||||  |  |||| |||||  ||||| ||| ||||||||||||
seq2  ACA-TTTCAGTTATGTATTTAAGATA--TGAGC-AGAATATAGGGCTATT  90

seq1  ATGGTTTGTTTGGTTGGTTTTTTTCTGTTCCATAATAACATGCAACATCA  150
      |  ||||| |||||  | |||||||||||| ||||| || ||||||||||
seq2  AATGTTTG-TTGGT--GGTTTTTTCTGTTCAATAATTACTTGCAACATCA  137

seq1  AATATCTTTACTCTTTTTAAAATTTGGTGTTTTATATTTCCTTTTGACAG  200
      || |||||||||| ||||||||||||||||||||   |||||||||||| 
seq2  AAAATCTTTACTC-TTTTAAAATTTGGTGTTTTAATATTCCTTTTGACA-  185

seq1  GCTGCATGTTTTAGTCTTTTTTCTCATTTATTAACCCATATATTTCTTTA  250
      ||||||| ||||||||||||||||||||||||||||||||| ||||||||
seq2  GCTGCAT-TTTTAGTCTTTTTTCTCATTTATTAACCCATAT-TTTCTTTA  233

seq1  CTATTGGCATTTATATGTACTTTATAAACATTGGATGAGTTATTATCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGCATTTATATGTACTTTATAAACATTGGATGAGTTATTATCCAG  283

seq1  ATATGTCTTCATATTTGTTTTCTTCTATCCCATGATTTGCTTTCTTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTCTTCATATTTGTTTTCTTCTATCCCATGATTTGCTTTCTTGTTT  333

seq1  TACTTCAGGAGTTTTAATGAATTCCTATTTTTAAATTATTTCTTTTTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCAGGAGTTTTAATGAATTCCTATTTTTAAATTATTTCTTTTTGCC  383

seq1  TGTTCTACTACATCAAGAAAGTTATTACCAGATATAAGGTTATGTACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTACTACATCAAGAAAGTTATTACCAGATATAAGGTTATGTACATT  433

seq1  TTCATTAATGATCTTTTAGAAATTTAATCATTTTATAGTTTACTTTACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAATGATCTTTTAGAAATTTAATCATTTTATAGTTTACTTTACCT  483

seq1  TAATCATCACAAGGATTAAGATCACATGATTCAAAGTCCCTACCCTGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATCACAAGGATTAAGATCACATGATTCAAAGTCCCTACCCTGTAC  533

seq1  TCCAGAAAGATAGAAGAAAAAATTTGAAAGGTAAACCATAATAACTATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAAGATAGAAGAAAAAATTTGAAAGGTAAACCATAATAACTATCT  583

seq1  TTGAATACATAAAAGACCCAAAAATTGCATGTGAACAAATAAAATATACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATACATAAAAGACCCAAAAATTGCATGTGAACAAATAAAATATACA  633

seq1  GTACAGCTCTCAAAAAATGTGTCTATAAAACACACATTCAGCAAATACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGCTCTCAAAAAATGTGTCTATAAAACACACATTCAGCAAATACAC  683

seq1  CTAGAAATCAGCACCTAGACCTATAATCATCTCAAATCCAAATTCTGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAATCAGCACCTAGACCTATAATCATCTCAAATCCAAATTCTGGAT  733

seq1  AGCAACGTTAAAAAAAAAAAAAAAAAAGAAAGAACAGCAAATTATGTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACGTTAAAAAAAAAAAAAAAAAAGAAAGAACAGCAAATTATGTCCC  783

seq1  TTGTAGGGCATGGCTAGCCTAATGCAGCAGGCCCTGAATATTCCAACATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGGCATGGCTAGCCTAATGCAGCAGGCCCTGAATATTCCAACATA  833

seq1  GCTGAAGGAAAAGAAAAATTTCTCAAAACCCACTATATGAAGAAGGTAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGGAAAAGAAAAATTTCTCAAAACCCACTATATGAAGAAGGTAGA  883

seq1  AGTCTTACACAGAATTAATGAATAAATACTCCAAAATAATCCAAGAAACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTACACAGAATTAATGAATAAATACTCCAAAATAATCCAAGAAACA  933

seq1  CAACTAAGCAATTAAAGGAAATGAATGAATTCCCTTGTATATTCCAAGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAAGCAATTAAAGGAAATGAATGAATTCCCTTGTATATTCCAAGAA  983

seq1  CATATAAACAGTTGGAGGAAATAAATAAAACTGTCCAAGATCTGAAAATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAACAGTTGGAGGAAATAAATAAAACTGTCCAAGATCTGAAAATG  1033

seq1  GAAATAAAAGCAATAAATAAAACACAAACTAAGAGAATTC  1090
      ||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAAGCAATAAATAAAACACAAACTAAGAGAATTC  1073