BAC Information

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BAC

Clone NameB6Ng01-124N13
Chromosome15 (Build37)
Map Location 51,067,207 - 51,097,192
singlet/doubletdoublet
Overlap genenone
Upstream geneTrps1, LOC100039644
Downstream geneLOC100039662, Eif3s3, LOC100039679, D530033C11Rik, Rad21, Aard, LOC100039720, LOC665219
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124N13.bB6Ng01-124N13.g
ACCDH927646DH927647
length1,0991,126
definitionDH927646|Mus musculus domesticus DNA, BAC clone: B6Ng01-124N13, 5' end.DH927647|Mus musculus domesticus DNA, BAC clone: B6Ng01-124N13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,096,089 - 51,097,192)(51,067,207 - 51,068,350)
sequence
gaattcaatgaaaatgtcttcccttaagggcagtgactgatgaagttgag
ttgaagattaaataatgattttgttctctttactaatttttattaagatg
gacattcttggtctcttcaaggcgaaaagtctgtgatttctccaagtaca
agggaaaagactgtcatcatcaaatgaagttgtcagttggggtaattatt
actctgaagtcaaactacaaatatttgctaatcttaggatagtaacctgc
ctcattgggtatatactattccagtttttcctgtgtgtatggtagtttct
catgtctgtaaatttatactttgacttttagatttatatcagaattaatt
tagattcttcatttttataaatgtcttataggttgaacatgttaccagaa
cagcaacagtaataaaaccttcactttccaaggacgtgtatagaaatctg
cagtgcttcagagaagatggaggcatgcataagattctgttttgtgctgc
agcttccagaagaatattagcataagactcaactccagctttgtctcact
ataaccccaaggttccagggagctgtccaagtctgttgaaacccactttt
tacaatgcatttttctctattttctttgtgtttgccaaaatgaacaaaac
tgatttttgtcagctgtcaagtggagcaagatgtcagacgggaggtgggg
gaagcttttccatacattcaattcttgtaacaaaaacaaacgattagacc
attggttgtctgctccaggagaggtttatatttccaaaattgcatcgcac
actcctaacgaagcagattggaagcagtgctaaagtcaacaggaaggctg
cagttttgcttgattcggatggagccaataagcttttggcaccttgagaa
cagcagcctgaaaaccctaagtccttaagcatggccttcctcttagtggt
atcaagtgattgtacaagctttcttggcatttcctgctgaattgtgggat
ggctgttgttatattccctatggtatgttgagagtgagtaggcagcacaa
tgtagattttgtcaatcacatatacttattgctccctcctctatgcctt
gaattctttaatgactcaggacctccatatggccatcttagtaaacatac
tacacagggatgctacgagtctcacatgagtaaattcatgagacaattct
ttgtaaactacacataacctttcacatgattaattgtttatacaatgcat
gtagttgaggcatgggttaaaatataggggcggtacagttcgtaagacta
ctagtaagtaggctctaaacacaatttcttcatcttatttattgttcaag
ttaatttcaacacagaaaataccttaaaatctcatcctctctttctatgt
gatcagtattcccatgtatgaatatatggtcacacagatttattgttatt
ttttaatgtgttattttagaatcggatcaaaaactgatatcctatttttc
agttctttatgtttctcctatcagcgagctcctgctagagtcaaagcaat
gggacagttcaagtgtttgcaatagcacattttgttatgaaattcgaaga
caaacatggctttatcttcccaattccccaattttatttgtgccaaagag
tggtaaaagtgaaaagcaaaatatttgcgggaaattgggtgaaaaataat
gagaaaacataactgatactaatggtgttgctcagggttggatttcccaa
ttaggaagtttcattaaatcaagttggcaggctactttaaggttacctta
ctcagggtggtagtttcacaggctaaggctaaccttggttttgtatccca
gaagtgcgattttcatctagattacattaataggcctcagggactgattt
agcctaagaatcagtgtatgcatatacatagaatacttgaaatataacct
ctgcatataagttcagggaacatcataaaagccagagaaccaggatgtct
ggtgtgagtgttattgatatacgagacaaaagctgcacccatgaaaccca
gtagatattatgctagacaagatgggaaaataataatactggttgacttt
gacgtcatgggtgagatctccaagaccctatccctagattagtgtaacag
aaatgatgtctgcgaacaagagaggaaatgaaccttcttcagcaaaacct
tgacagtatccatcccagaaggcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_51096089_51097192
seq2: B6Ng01-124N13.b_46_1144 (reverse)

seq1  AAGGCATTAGGAGAAGGAGCAATAGGTATA-GTGATTGACAAAACTTACA  49
      |||||| |||  || ||||||||| ||||| |||||||||||||  ||||
seq2  AAGGCA-TAGAGGAGGGAGCAATAAGTATATGTGATTGACAAAATCTACA  49

seq1  TCTGTGCTGCCTACTCACTCTCAAACATAACCTA-GGAATATAACAACAG  98
      | |||||||||||||||||||| |||||| | || |||||||||||||||
seq2  T-TGTGCTGCCTACTCACTCTC-AACATACCATAGGGAATATAACAACAG  97

seq1  CCCATCCCACAATTCAGCAGGAAATGCCAAGAAAGCCTGTTACAATCACT  148
       ||||||||||||||||||||||||||||||||||| || ||||||||||
seq2  -CCATCCCACAATTCAGCAGGAAATGCCAAGAAAGCTTG-TACAATCACT  145

seq1  TGATACCACCTAAGAGGAAGGCCATGCTTAAGGACTTAGGATTTTCAGGC  198
      |||||||| ||||||||||||||||||||||||||||||| |||||||||
seq2  TGATACCA-CTAAGAGGAAGGCCATGCTTAAGGACTTAGGGTTTTCAGGC  194

seq1  TGCTGTTCTCAAGGTGCCAAAAGCTTATTGGCTCCATCCGAATCAAGCAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTCTCAAGGTGCCAAAAGCTTATTGGCTCCATCCGAATCAAGCAA  244

seq1  AACTGCCAGCCTTCCTGTTGACTTTAGCACTGCTTCCAATCTGCTTCGTT  298
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTG-CAGCCTTCCTGTTGACTTTAGCACTGCTTCCAATCTGCTTCGTT  293

seq1  AGGAGTGTGCGATGCAATTTTGGAAATATAAACCTCTCCTGGAGCAGACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGTGCGATGCAATTTTGGAAATATAAACCTCTCCTGGAGCAGACA  343

seq1  ACCAATGGTCTAATCGTTTGTTTTTGTTACAAGAATTGAATGTATGGAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGGTCTAATCGTTTGTTTTTGTTACAAGAATTGAATGTATGGAAA  393

seq1  AGCTTCCCCCACCTCCCGTCTGACATCTTGCTCCACTTGACAGCTGACAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCCCCACCTCCCGTCTGACATCTTGCTCCACTTGACAGCTGACAA  443

seq1  AAATCAGTTTTGTTCATTTTGGCAAACACAAAGAAAATAGAGAAAAATGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGTTTTGTTCATTTTGGCAAACACAAAGAAAATAGAGAAAAATGC  493

seq1  ATTGTAAAAAGTGGGTTTCAACAGACTTGGACAGCTCCCTGGAACCTTGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAAAAGTGGGTTTCAACAGACTTGGACAGCTCCCTGGAACCTTGG  543

seq1  GGTTATAGTGAGACAAAGCTGGAGTTGAGTCTTATGCTAATATTCTTCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATAGTGAGACAAAGCTGGAGTTGAGTCTTATGCTAATATTCTTCTG  593

seq1  GAAGCTGCAGCACAAAACAGAATCTTATGCATGCCTCCATCTTCTCTGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGCAGCACAAAACAGAATCTTATGCATGCCTCCATCTTCTCTGAA  643

seq1  GCACTGCAGATTTCTATACACGTCCTTGGAAAGTGAAGGTTTTATTACTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCAGATTTCTATACACGTCCTTGGAAAGTGAAGGTTTTATTACTG  693

seq1  TTGCTGTTCTGGTAACATGTTCAACCTATAAGACATTTATAAAAATGAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTTCTGGTAACATGTTCAACCTATAAGACATTTATAAAAATGAAG  743

seq1  AATCTAAATTAATTCTGATATAAATCTAAAAGTCAAAGTATAAATTTACA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAATTAATTCTGATATAAATCTAAAAGTCAAAGTATAAATTTACA  793

seq1  GACATGAGAAACTACCATACACACAGGAAAAACTGGAATAGTATATACCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGAGAAACTACCATACACACAGGAAAAACTGGAATAGTATATACCC  843

seq1  AATGAGGCAGGTTACTATCCTAAGATTAGCAAATATTTGTAGTTTGACTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGCAGGTTACTATCCTAAGATTAGCAAATATTTGTAGTTTGACTT  893

seq1  CAGAGTAATAATTACCCCAACTGACAACTTCATTTGATGATGACAGTCTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTAATAATTACCCCAACTGACAACTTCATTTGATGATGACAGTCTT  943

seq1  TTCCCTTGTACTTGGAGAAATCACAGACTTTTCGCCTTGAAGAGACCAAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTGTACTTGGAGAAATCACAGACTTTTCGCCTTGAAGAGACCAAG  993

seq1  AATGTCCATCTTAATAAAAATTAGTAAAGAGAACAAAATCATTATTTAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCATCTTAATAAAAATTAGTAAAGAGAACAAAATCATTATTTAAT  1043

seq1  CTTCAACTCAACTTCATCAGTCACTGCCCTTAAGGGAAGACATTTTCATT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAACTCAACTTCATCAGTCACTGCCCTTAAGGGAAGACATTTTCATT  1093

seq1  GAATTC  1104
      ||||||
seq2  GAATTC  1099

seq1: chr15_51067207_51068350
seq2: B6Ng01-124N13.g_68_1193

seq1  GAATTCTTTAATGACTCAGGACCTCCATATGGCCATCTTAGTAAACATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAATGACTCAGGACCTCCATATGGCCATCTTAGTAAACATAC  50

seq1  TACACAGGGATGCTACGAGTCTCACATGAGTAAATTCATGAGACAATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGGGATGCTACGAGTCTCACATGAGTAAATTCATGAGACAATTCT  100

seq1  TTGTAAACTACACATAACCTTTCACATGATTAATTGTTTATACAATGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAACTACACATAACCTTTCACATGATTAATTGTTTATACAATGCAT  150

seq1  GTAGTTGAGGCATGGGTTAAAATATAGGGGCGGTACAGTTCGTAAGACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTGAGGCATGGGTTAAAATATAGGGGCGGTACAGTTCGTAAGACTA  200

seq1  CTAGTAAGTAGGCTCTAAACACAATTTCTTCATCTTATTTATTGTTCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAAGTAGGCTCTAAACACAATTTCTTCATCTTATTTATTGTTCAAG  250

seq1  TTAATTTCAACACAGAAAATACCTTAAAATCTCATCCTCTCTTTCTATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTCAACACAGAAAATACCTTAAAATCTCATCCTCTCTTTCTATGT  300

seq1  GATCAGTATTCCCATGTATGAATATATGGTCACACAGATTTATTGTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTATTCCCATGTATGAATATATGGTCACACAGATTTATTGTTATT  350

seq1  TTTTAATGTGTTATTTTAGAATCGGATCAAAAACTGATATCCTATTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATGTGTTATTTTAGAATCGGATCAAAAACTGATATCCTATTTTTC  400

seq1  AGTTCTTTATGTTTCTCCTATCAGCGAGCTCCTGCTAGAGTCAAAGCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTATGTTTCTCCTATCAGCGAGCTCCTGCTAGAGTCAAAGCAAT  450

seq1  GGGACAGTTCAAGTGTTTGCAATAGCACATTTTGTTATGAAATTCGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGTTCAAGTGTTTGCAATAGCACATTTTGTTATGAAATTCGAAGA  500

seq1  CAAACATGGCTTTATCTTCCCAATTCCCCAATTTTATTTGTGCCAAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATGGCTTTATCTTCCCAATTCCCCAATTTTATTTGTGCCAAAGAG  550

seq1  TGGTAAAAGTGAAAAGCAAAATATTTGCGGGAAATTGGGTGAAAAATAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAAGTGAAAAGCAAAATATTTGCGGGAAATTGGGTGAAAAATAAT  600

seq1  GAGAAAACATAACTGATACTAATGGTGTTGCTCAGGGTTGGATTTCCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAACATAACTGATACTAATGGTGTTGCTCAGGGTTGGATTTCCCAA  650

seq1  TTAGGAAGTTTCATTAAATCAAGTTGGCAGGCTACTTTAAGGTTACCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAAGTTTCATTAAATCAAGTTGGCAGGCTACTTTAAGGTTACCTTA  700

seq1  CTCAGGGTGGTAGTTTCACAGGCTAAGGCTAACCTTGGTTTTGTATCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGTGGTAGTTTCACAGGCTAAGGCTAACCTTGGTTTTGTATCCCA  750

seq1  GAAGTGCGATTTTCATCTAGATTACATTAATAGGCCTCAGGGACTGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGCGATTTTCATCTAGATTACATTAATAGGCCTCAGGGACTGATTT  800

seq1  AGCCTAAGAATCAGTGTATGCATATACATAGAATACTTGAAATATAACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAAGAATCAGTGTATGCATATACATAGAATACTTGAAATATAACCT  850

seq1  CTGCATATAAAGTTCAGGGAACATCATAAAAGCCAGAGAACCAGGATGTC  900
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATAT-AAGTTCAGGGAACATCATAAAAGCCAGAGAACCAGGATGTC  899

seq1  TGGTGTGAGATGTTATTGATATACGAGACAGAAGCTGCACCCATGAAACC  950
      ||||||||| |||||||||||||||||||| |||||||||||||||||||
seq2  TGGTGTGAG-TGTTATTGATATACGAGACAAAAGCTGCACCCATGAAACC  948

seq1  CAGAGAATATTATTGCCTAGACAAGATGGGAAAAATAATAATACTGGTTG  1000
      |||   |||||||   |||||||||||||| |||||||||||||||||||
seq2  CAGTAGATATTAT--GCTAGACAAGATGGG-AAAATAATAATACTGGTTG  995

seq1  ACATTTTGACGTCAATGGGTGAGATCTCACAAGACCCTATCCCTAGATTA  1050
      ||  ||||||||| |||||||||||||| |||||||||||||||||||| 
seq2  AC--TTTGACGTC-ATGGGTGAGATCTC-CAAGACCCTATCCCTAGATT-  1040

seq1  AGTGTAACAGGAAATTAATGGCTGCCGAACAAGAGAG--AATGAACCTTC  1098
      ||||||||||  || | ||| ||| ||||||||||||  |||||||||||
seq2  AGTGTAACAG--AAATGATGTCTG-CGAACAAGAGAGGAAATGAACCTTC  1087

seq1  TCCAGCAACAAACATTTGACAGGTTATCCAATCCCAAGAAGCCAGC  1144
      | |||||  ||||  |||||||  ||||| ||||| ||||| ||||
seq2  TTCAGCA--AAAC-CTTGACAG--TATCC-ATCCC-AGAAGGCAGC  1126