BAC Information

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BAC

Clone NameB6Ng01-125A06
Chromosome15 (Build37)
Map Location 43,551,605 - 43,725,976
singlet/doubletdoublet
Overlap geneLOC100039288, Tmem74
Upstream geneRspo2, LOC675960, Eif3s6, Ttc35
Downstream geneLOC100039309, Trhr, LOC665041, Nudcd1, Eny2, Pkhd1l1, Ebag9, 5730410E15Rik, A930017M01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125A06.bB6Ng01-125A06.g
ACCDH927771DH927772
length1,1361,130
definitionDH927771|Mus musculus domesticus DNA, BAC clone: B6Ng01-125A06, 5' end.DH927772|Mus musculus domesticus DNA, BAC clone: B6Ng01-125A06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,724,830 - 43,725,976)(43,551,605 - 43,552,751)
sequence
gaattctaaattctggttacatatttcaaaattgcaagaggattttgaat
attttctccacaaagaactgataaattctaaaaaatttgatgtacgaagt
atcccaatttaatcattttttatattttattatatgtataacaagcacat
atttcaggcattatgcttacactatgtgtacaatcactgtaacaattaat
cataaaaatttttaaaatcttgttacactttttattattctatgtatttg
tttggagtgcagagagtgggtactgcgtgctatggtaagtctttggagtt
tagaagacaactcttgggagttggttctcttcctatgatgtgggtcctgg
taatagaagtctggtggtcaaattatctcattagctctttacttgaatct
tcagaagttggagatccaaaactctgcatgtgttgacaacatcttaatct
gtttttgctgttgctgtcctttgcatcttcccttcccattcaggaagaat
ctttcttaatctcctctcactgttgtttttgtgactcctccccttcctcc
ctttatccttctttacttcttcttgctcaaacgttcacttccaacctcct
tgcctcacttggattgcctccctccaattcttttttaatatagcacaatt
taaatttttctcagcttttaattttttaattttatgtgttaccaatctca
gcaaattgaaagatatcccttaacagaaaagtgggagatcaagggctaac
ttatgagtgaagttctcccctttcccataagctaataagaaagcaatatg
gcaattgtgctttgatatgagttcaacaatcagttatgccgagaaaaagg
tagtgatctgttctaagcaggatgaagaaaggttgcttagaccttatgta
ctaagcttccgcgcagctaagttagagggatgcagagagtctctgggatg
agagctttgaggagtgaagtttagaaccagttgtgtaagtggagaaaaca
gattgtaagtgagcatgtgagaattgttttgatttcatgtagttcttgaa
atggagtccacaatgcagaacaagaagacacagcactaaggtgaaaaagc
gaaactttctcagaaaagaagctactttcgaaactc
gaattctcgttgggaattcattccagttgtcactgtggtagatagtataa
taatactttccgatgttttcgttagagatgaatgctcgaactgcatgact
caacttgacttttcagttaaatcctgacgcctgtatgaggaaacttaaat
attcattaatccttcaagatttatcgtttgaactaaggtgttgccaggaa
tgctagctctaaccatagttttctgaatgtcaaatgcatgaatttcttga
agacttgatattatgtgttgctcaagtgacaatggtcagttctacacatg
gggtgaacccaaggattaatcccttcctcccaactgtgaaaagtcatggc
tcagaagcagagaagaattaatcattcccaccccaagagaaagaaaaagt
tctttttgttttgttttgttttgttttgagacagggtttctctgtatagc
cctggctgtcctggaactcactttgtagaccaggctgccctcgaactcag
aaatccacctgcctctgcctcccaagtgctgggattaaaggcgtggacca
ccatgcccggcaagaaaaagttcttaagataatttggaagttggtggaga
tccacatcagtcctcctcttcttggttgaggtaattctgacacacatgct
ttatactaatgccagattttcctgtggtaatatactgtgctaagtgtcac
aatagcacatctttagtacttccttctttttttaaaatgcaattttcttc
agtgttgcctatacctagaaaattacttgaactgtattcttacctcagtt
cttcttggaggtctaaaattaaagaaaggtaaaattcagatttccttaga
aattctaaaatggggctgtcaacatggctctcagggcaagaaacattcct
tatttattcatatttttccttatttaatcaaataaacagccaccacaatg
caatggagtatttctgaaaatctaacaggaatcctcacagctaccaaaat
ggcaattgattacatttggaatccagttagtggaacccagtgagtatcag
ggttaggacaaatgctggagtcggttctagcagtataacaagctcgtgta
agtactcctgcttacggcatttctattttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_43724830_43725976
seq2: B6Ng01-125A06.b_49_1184 (reverse)

seq1  GAGTTTCTGAAGTAGCTTTTCTTTTCTGAGAAAGTTCTGCTTTCTCCACC  50
      |||||||  |||||||  ||||||||||||||||||  ||||| ||  | 
seq2  GAGTTTCGAAAGTAGC--TTCTTTTCTGAGAAAGTTTCGCTTTTTCACCT  48

seq1  TAGTGCTTGTGTCTTCTTGTTCTGCCATTGTGGACTCCATTTTCAAGAAC  100
      |||||| ||||||||||||||||| |||||||||||||| ||||||||||
seq2  TAGTGC-TGTGTCTTCTTGTTCTG-CATTGTGGACTCCA-TTTCAAGAAC  95

seq1  TACATGAAATTCAAAACAATTTCTCACATGCTCACTTACCAATCTGTTTT  150
      ||||||||| ||||||||| |||||||||||||||||| |||||||||||
seq2  TACATGAAA-TCAAAACAA-TTCTCACATGCTCACTTA-CAATCTGTTTT  142

seq1  CTCCACTTACACAAACTGGTTCTAAACTTCACTCCTCAAAGCTCTCATTC  200
      |||||||||||| ||||||||||||||||||||||||||||||||||| |
seq2  CTCCACTTACAC-AACTGGTTCTAAACTTCACTCCTCAAAGCTCTCATCC  191

seq1  CAGAGACTCTCTGCATCCCTCTAACTTAGCTGCGCGGAAGCTTAGTACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACTCTCTGCATCCCTCTAACTTAGCTGCGCGGAAGCTTAGTACAT  241

seq1  AAGGTCTAAGCAACCTTTCTTCATCCTGCTTAGAACAGATCACTACCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAGGTCTAAGCAACCTTTCTTCATCCTGCTTAGAACAGATCACTACC-TT  290

seq1  TTTCTCGGCATAACCTGATTGTTGAACTCATATCAAAGCACAATTGCCAT  350
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTCTCGGCATAA-CTGATTGTTGAACTCATATCAAAGCACAATTGCCAT  339

seq1  ATTGCTTTCTTATTAGCTTATGGGAAAGGGGAGAACTTCACTCATAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTTCTTATTAGCTTATGGGAAAGGGGAGAACTTCACTCATAAGTT  389

seq1  AGCCCTTGATCTCCCACTTTTCTGTTAAGGGATATCTTTCAATTTGCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTGATCTCCCACTTTTCTGTTAAGGGATATCTTTCAATTTGCTGA  439

seq1  GATTGGTAACACATAAAATTAAAAAATTAAAAGCTGAGAAAAATTTAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGTAACACATAAAATTAAAAAATTAAAAGCTGAGAAAAATTTAAAT  489

seq1  TGTGCTATATTAAAAAAGAATTGGAGGGAGGCAATCCAAGTGAGGCAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTATATTAAAAAAGAATTGGAGGGAGGCAATCCAAGTGAGGCAAGG  539

seq1  AGGTTGGAAGTGAACGTTTGAGCAAGAAGAAGTAAAGAAGGATAAAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGAAGTGAACGTTTGAGCAAGAAGAAGTAAAGAAGGATAAAGGGA  589

seq1  GGAAGGGGAGGAGTCACAAAAACAACAGTGAGAGGAGATTAAGAAAGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGGAGGAGTCACAAAAACAACAGTGAGAGGAGATTAAGAAAGATT  639

seq1  CTTCCTGAATGGGAAGGGAAGATGCAAAGGACAGCAACAGCAAAAACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGAATGGGAAGGGAAGATGCAAAGGACAGCAACAGCAAAAACAGA  689

seq1  TTAAGATGTTGTCAACACATGCAGAGTTTTGGATCTCCAACTTCTGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATGTTGTCAACACATGCAGAGTTTTGGATCTCCAACTTCTGAAGA  739

seq1  TTCAAGTAAAGAGCTAATGAGATAATTTGACCACCAGACTTCTATTACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTAAAGAGCTAATGAGATAATTTGACCACCAGACTTCTATTACCA  789

seq1  GGACCCACATCATAGGAAGAGAACCAACTCCCAAGAGTTGTCTTCTAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCACATCATAGGAAGAGAACCAACTCCCAAGAGTTGTCTTCTAAAC  839

seq1  TCCAAAGACTTACCATAGCACGCAGTACCCACTCTCTGCACTCCAAACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGACTTACCATAGCACGCAGTACCCACTCTCTGCACTCCAAACAA  889

seq1  ATACATAGAATAATAAAAAGTGTAACAAGATTTTAAAAATTTTTATGATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAGAATAATAAAAAGTGTAACAAGATTTTAAAAATTTTTATGATT  939

seq1  AATTGTTACAGTGATTGTACACATAGTGTAAGCATAATGCCTGAAATATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTACAGTGATTGTACACATAGTGTAAGCATAATGCCTGAAATATG  989

seq1  TGCTTGTTATACATATAATAAAATATAAAAAATGATTAAATTGGGATACT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTTATACATATAATAAAATATAAAAAATGATTAAATTGGGATACT  1039

seq1  TCGTACATCAAATTTTTTAGAATTTATCAGTTCTTTGTGGAGAAAATATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTACATCAAATTTTTTAGAATTTATCAGTTCTTTGTGGAGAAAATATT  1089

seq1  CAAAATCCTCTTGCAATTTTGAAATATGTAACCAGAATTTAGAATTC  1147
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCCTCTTGCAATTTTGAAATATGTAACCAGAATTTAGAATTC  1136

seq1: chr15_43551605_43552751
seq2: B6Ng01-125A06.g_67_1196

seq1  GAATTCTCGTTGGGAATTCATTCCAGTTGTCACTGTGGTAGATAGTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGTTGGGAATTCATTCCAGTTGTCACTGTGGTAGATAGTATAA  50

seq1  TAATACTTTCCGATGTTTTCGTTAGAGATGAATGCTCGAACTGCATGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTTTCCGATGTTTTCGTTAGAGATGAATGCTCGAACTGCATGACT  100

seq1  CAACTTGACTTTTCAGTTAAATCCTGACGCCTGTATGAGGAAACTTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGACTTTTCAGTTAAATCCTGACGCCTGTATGAGGAAACTTAAAT  150

seq1  ATTCATTAATCCTTCAAGATTTATCGTTTGAACTAAGGTGTTGCCAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTAATCCTTCAAGATTTATCGTTTGAACTAAGGTGTTGCCAGGAA  200

seq1  TGCTAGCTCTAACCATAGTTTTCTGAATGTCAAATGCATGAATTTCTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCTCTAACCATAGTTTTCTGAATGTCAAATGCATGAATTTCTTGA  250

seq1  AGACTTGATATTATGTGTTGCTCAAGTGACAATGGTCAGTTCTACACATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGATATTATGTGTTGCTCAAGTGACAATGGTCAGTTCTACACATG  300

seq1  GGGTGAACCCAAGGATTAATCCCTTCCTCCCAACTGTGAAAAGTCATGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAACCCAAGGATTAATCCCTTCCTCCCAACTGTGAAAAGTCATGGC  350

seq1  TCAGAAGCAGAGAAGAATTAATCATTCCCACCCCAAGAGAAAGAAAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGCAGAGAAGAATTAATCATTCCCACCCCAAGAGAAAGAAAAAGT  400

seq1  TCTTTTTGTTTTGTTTTGTTTTGTTTTGAGACAGGGTTTCTCTGTATAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTGTTTTGTTTTGTTTTGTTTTGAGACAGGGTTTCTCTGTATAGC  450

seq1  CCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGCCCTCGAACTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGCCCTCGAACTCAG  500

seq1  AAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGGACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGGACCA  550

seq1  CCATGCCCGGCAAGAAAAAGTTCTTAAGATAATTTGGAAGTTGGTGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCCGGCAAGAAAAAGTTCTTAAGATAATTTGGAAGTTGGTGGAGA  600

seq1  TCCACATCAGTCCTCCTCTTCTTGGTTGAGGTAATTCTGACACACATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCAGTCCTCCTCTTCTTGGTTGAGGTAATTCTGACACACATGCT  650

seq1  TTATACTAATGCCAGATTTTCCTGTGGTAATATACTGTGCTAAGTGTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTAATGCCAGATTTTCCTGTGGTAATATACTGTGCTAAGTGTCAC  700

seq1  AATAGCACATCTTTAGTACTTCCTTCTTTTTTTAAAATGCAATTTTCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCACATCTTTAGTACTTCCTTCTTTTTTTAAAATGCAATTTTCTTC  750

seq1  AGTGTTGCCTATACCTAGAAAATTACTTGAACTGTAATTCTTACCTCAGG  800
      ||||||||||||||||||||||||||||||||||| |||||||||||| |
seq2  AGTGTTGCCTATACCTAGAAAATTACTTGAACTGT-ATTCTTACCTCA-G  798

seq1  TTCTTCTTGGAGGTCTAAAATTAAAAGAAAGGTAAAATTCAGATTTCCTT  850
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTCTTCTTGGAGGTCTAAAATT-AAAGAAAGGTAAAATTCAGATTTCCTT  847

seq1  AGAAATTTCTAAAATGGGGCTGTCAACATGGCTTCTCAGGGCAAGAAAAC  900
      ||||| |||||||||||||||||||||||||| |||||||||||| ||||
seq2  AGAAA-TTCTAAAATGGGGCTGTCAACATGGC-TCTCAGGGCAAG-AAAC  894

seq1  ATTCCTTATTTATTCATATTTTTCCTTATTTATTCAAAATAAACAGCCAC  950
      |||||||||||||||||||||||||||||||| || ||||||||||||||
seq2  ATTCCTTATTTATTCATATTTTTCCTTATTTAATC-AAATAAACAGCCAC  943

seq1  CACAATGCAAT-GAGTATTTCTGAAAAATCTAACAGGAAATCCTCACAGC  999
      ||||||||||| ||||||||||| ||||||||||||| ||||||||||||
seq2  CACAATGCAATGGAGTATTTCTG-AAAATCTAACAGG-AATCCTCACAGC  991

seq1  TACCATATATGGCAATTGAATTAACATTTTGAAATCCCAGTTAGTGGAAC  1049
      ||||| | |||||||||||  | |||||| |||   ||||||||||||||
seq2  TACCA-AAATGGCAATTGA--TTACATTTGGAA--TCCAGTTAGTGGAAC  1036

seq1  CCAGTGAGTCATCAGGTGTTA-GACAAATGCT-GAGTCTGTTTCTAGCCA  1097
      ||||||||| |||||| |||| |||||||||| ||||| | |||||| ||
seq2  CCAGTGAGT-ATCAGG-GTTAGGACAAATGCTGGAGTC-GGTTCTAG-CA  1082

seq1  GTATAACAAGCTC-TGTAAAGTAACTCTGGCTACAGGCCTATTCTATTTT  1146
      ||||||||||||| ||| |||| ||||  |||   ||| | |||||||||
seq2  GTATAACAAGCTCGTGT-AAGT-ACTCCTGCTTACGGCAT-TTCTATTTT  1129

seq1  T  1147
      |
seq2  T  1130