BAC Information

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BAC

Clone NameB6Ng01-125P19
Chromosome15 (Build37)
Map Location 78,321,865 - 78,542,318
singlet/doubletdoublet
Overlap geneIl2rb, C1qtnf6, Sstr3, EG626952, Rac2, Pscd4, Lrrc62
Upstream geneEG626615, 2210421G13Rik, 9130218O11Rik, LOC666661, A330102K04Rik, EG545115, LOC666348, LOC666679, 2310016F22Rik, Apol2, Myh9, Txn2, Foxred2, Eif3s7, Cacng2, Rabl4, Pvalb, Ncf4, Csf2rb2, Csf2rb1, 1700061J05Rik, Tst, Mpst, Kctd17, Tmprss6
Downstream geneMfng, Card10, LOC641104, LOC100041601, Cdc42ep1, Lgals2, Gga1, Sh3bp1, Pdxp, Lgals1, Nol12, Triobp, H1f0, Gcat, Galr3, LOC100042603, Ankrd54, Eif3s6ip, 1700088E04Rik, Polr2f, Sox10, LOC100041655, Pick1, Slc16a8, Baiap2l2, Pla2g6, Maff, 4732495E13Rik, Csnk1e, LOC675798, LOC100041676, Kcnj4, Kdelr3, Ddx17, Dmc1, 4933432B09Rik, Pgea1, Tomm22, Josd1, Gtpbp1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125P19.bB6Ng01-125P19.g
ACCDH928472DH928473
length1,1891,036
definitionDH928472|Mus musculus domesticus DNA, BAC clone: B6Ng01-125P19, 5' end.DH928473|Mus musculus domesticus DNA, BAC clone: B6Ng01-125P19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,321,865 - 78,323,069)(78,541,283 - 78,542,318)
sequence
gaattctggacgccagttctcatgcttgtacgcctgtgccaggcactctg
cccactgagccacctgtcacaaccccaatccagacccatttcaaagggaa
gacacagagcgcctatccatggccaagcaggccccatcagcagcctctgc
atgtgtctgggagaagcctgtgcaagctcaggaagatggatacctgccct
tgggtcccactgccttgtccctcttcaccttgcctcccaggctagatgga
tctcctccctgaagcaggaatctgggatgtgacctcccactggggaaagt
atggacatcaaaatgccagatgctcacttttcactgctgcagatgcccaa
ggtgtagccaggagcaggaggaagacgtagagggacaggctccagggaag
agctatggtagccatcacagctgagaggagctgaggatgcaaaccctaag
tggagaaggaaagaacaagtcagaaaccccaccccactctaccctctctc
cgcccagccagagcaaagcaggcccaggctctctctccctctgagctccc
ttccttcctccagaggtgcctaaaatgtcagaccaaaccagtccttacac
ggactctgttttcactataaatgaccaacccatcacaagaaactggtggc
agtaggtggtcatgcaaggagttcctaggggcagccaccggctctccgga
gcacggtgtgaatgaggtgtctcccacccaaagcatctttggcagatgcc
caccccatgtacccaggtgaggtgaggtgacagggactcagctctgtgat
tggacagccaagtccctgggtgactaataggcgagaagcatccacatcat
agctgttctgggaaaaggaatcgctcaggccccaagcagatagagaccag
ctcaagacttttgcacatgacttaaaacagtgttcagtttgaaaacacac
atacacgcatgcattcacgtacctatgtatatgagtcatagacagtctat
cagacaggacatttggattccattcattctgggcttctgatctccaaatg
gaataactatcacaggctacagagcaccctacttcagccctgaggagcat
gaagcagacgtggctgcaaagggggtcttgcagttcaataacttggtggc
ctttgtctggaaccttaaaggcctctgacttgtccttcc
gaattctgaatgagagggggctcacagggtcagggctcatccttcctggc
tgtggacagggtgtggctccagttgatgagagggactgggcgttgctggt
gatttggaggaccggcaggagggtggcacaggtgggcactcaggtgaggt
gaacgctatatgtgtgggtcctgagcattactgtgggtgtgtaactgtgt
ggcagtgcctgtgagtgaggggacttgggagagtcagggaccctgtggct
gagctggagtccctctgttcccagaagatctacccatctattgatcaacg
ttgatcatccattaatcacttctgccctctgacttcaaagatgtctgatg
gcccctggcctcccgctctgcccctaaactctatgctataccttggagag
ttcccagtctgcctatctgtcctgaggccctaaccctcccgggctcctcc
cccactggcaggctctcttctgtctctcaccagtttgccatattgctcca
tccttcaccccacttatccctactccttctttcccgtcttcctctctatc
tctcacagtatctctgtgcctcttcatctctctccccacctctctatctt
ggtctctctccatctcctcccacacttctctgcctccatctctccggcta
tctctctctctccatctatctctcctttcatctctctgacttctcttcat
ctcagtccatctctttccatctccctccatctctctttctcctgtcttca
tcctcttcagtctctctccatctctccctcatcttttctgtctctctctc
atatctctttatctcggtctctccccccagacctccccacaaggcccctt
gccatctctcagctgccacggccctccagctctgtctcttagaatctgcc
ttcatctctctcccttttccctcaccccttcccttccctcagctctctct
ctcacactgaatatcatttggtggtatatgctgttgccatggaaactaag
aaagaagtgtagtttacccttcagacttagcatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_78321865_78323069
seq2: B6Ng01-125P19.b_51_1239

seq1  GAATTCTGGACGCCAGTTCTCATGCTTGTACGCCTGTGCCAGGCACTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGACGCCAGTTCTCATGCTTGTACGCCTGTGCCAGGCACTCTG  50

seq1  CCCACTGAGCCACCTGTCACAACCCCAATCCAGACCCATTTCAAAGGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGAGCCACCTGTCACAACCCCAATCCAGACCCATTTCAAAGGGAA  100

seq1  GACACAGAGCGCCTATCCATGGCCAAGCAGGCCCCATCAGCAGCCTCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGAGCGCCTATCCATGGCCAAGCAGGCCCCATCAGCAGCCTCTGC  150

seq1  ATGTGTCTGGGAGAAGCCTGTGCAAGCTCAGGAAGATGGATACCTGCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCTGGGAGAAGCCTGTGCAAGCTCAGGAAGATGGATACCTGCCCT  200

seq1  TGGGTCCCACTGCCTTGTCCCTCTTCACCTTGCCTCCCAGGCTAGATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCCCACTGCCTTGTCCCTCTTCACCTTGCCTCCCAGGCTAGATGGA  250

seq1  TCTCCTCCCTGAAGCAGGAATCTGGGATGTGACCTCCCACTGGGGAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCCTGAAGCAGGAATCTGGGATGTGACCTCCCACTGGGGAAAGT  300

seq1  ATGGACATCAAAATGCCAGATGCTCACTTTTCACTGCTGCAGATGCCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACATCAAAATGCCAGATGCTCACTTTTCACTGCTGCAGATGCCCAA  350

seq1  GGTGTAGCCAGGAGCAGGAGGAAGACGTAGAGGGACAGGCTCCAGGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGCCAGGAGCAGGAGGAAGACGTAGAGGGACAGGCTCCAGGGAAG  400

seq1  AGCTATGGTAGCCATCACAGCTGAGAGGAGCTGAGGATGCAAACCCTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGGTAGCCATCACAGCTGAGAGGAGCTGAGGATGCAAACCCTAAG  450

seq1  TGGAGAAGGAAAGAACAAGTCAGAAACCCCACCCCACTCTACCCTCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAGGAAAGAACAAGTCAGAAACCCCACCCCACTCTACCCTCTCTC  500

seq1  CGCCCAGCCAGAGCAAAGCAGGCCCAGGCTCTCTCTCCCTCTGAGCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCAGCCAGAGCAAAGCAGGCCCAGGCTCTCTCTCCCTCTGAGCTCCC  550

seq1  TTCCTTCCTCCAGAGGTGCCTAAAATGTCAGACCAAACCAGTCCTTACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTCCAGAGGTGCCTAAAATGTCAGACCAAACCAGTCCTTACAC  600

seq1  GGACTCTGTTTTCACTATAAATGACCAACCCATCACAAGAAACTGGTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTGTTTTCACTATAAATGACCAACCCATCACAAGAAACTGGTGGC  650

seq1  AGTAGGTGGTCATGCAAGGAGTTCCTAGGGGCAGCCACCGGCTCTCCGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGTGGTCATGCAAGGAGTTCCTAGGGGCAGCCACCGGCTCTCCGGA  700

seq1  GCACGGTGTGAATGAGGTGTCTCCCACCCAAAGCATCTTTGGCAGATGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGGTGTGAATGAGGTGTCTCCCACCCAAAGCATCTTTGGCAGATGCC  750

seq1  CACCCCATGTACCCAGGTGAGGTGAGGTGACAGGGACTCAGCTCTGTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCATGTACCCAGGTGAGGTGAGGTGACAGGGACTCAGCTCTGTGAT  800

seq1  TGGACAGCCAAGTCCCTGGGTGACTAATAGGCGAGAAGCATCCACATCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGCCAAGTCCCTGGGTGACTAATAGGCGAGAAGCATCCACATCAT  850

seq1  AGCTGTTCTGGGAAAAGGAATCGCTCAGGCCCCAAGCAGGATAGAGACCA  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGCTGTTCTGGGAAAAGGAATCGCTCAGGCCCCAAGCA-GATAGAGACCA  899

seq1  GCTCAAGACTTTTGCACATGACTTAAAACAGTGTTCAGTTTGAAAACACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGACTTTTGCACATGACTTAAAACAGTGTTCAGTTTGAAAACACA  949

seq1  CATACACGCATGCATTCACGTACCTATGTATATGAGTCATAGACAGTCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACGCATGCATTCACGTACCTATGTATATGAGTCATAGACAGTCTA  999

seq1  TCAGGACAAGGACATTTGGATTCCATTCATTCCTGGGTCTCTGATCTCCA  1050
      ||| ||| ||||||||||||||||||||||| |||||  |||||||||||
seq2  TCA-GAC-AGGACATTTGGATTCCATTCATT-CTGGGCTTCTGATCTCCA  1046

seq1  AAT-GAATACCTATCACAGGGCTACCAAGAGCACCC-ACTTCAGCCCTGA  1098
      ||| ||||| |||||||| ||||||  ||||||||| |||||||||||||
seq2  AATGGAATAACTATCACA-GGCTAC--AGAGCACCCTACTTCAGCCCTGA  1093

seq1  GGAGCATGGAAGGCAAGACCGTGGCCTGCCTTAGGTGGTTCTTGCAGTCC  1148
      ||||||| ||||   ||| ||||| ||||   | | || ||||||||| |
seq2  GGAGCAT-GAAG--CAGA-CGTGG-CTGC--AAAGGGGGTCTTGCAGTTC  1136

seq1  ACATAAGCTGGTGGCTTTGGTCTGGACCTCTAAAAGCCTCCCTGGACTTG  1198
      | ||||  ||||||| || ||||||| |  |||| |||||    ||||||
seq2  A-ATAACTTGGTGGCCTTTGTCTGGAACCTTAAAGGCCTC---TGACTTG  1182

seq1  TCCTTCC  1205
      |||||||
seq2  TCCTTCC  1189

seq1: chr15_78541283_78542318
seq2: B6Ng01-125P19.g_72_1107 (reverse)

seq1  AAAATGCTGAAGTCTTGAAGGGTACACT-CACTTCTTTCTTAGGTTTCCC  49
      |||||||| ||||| ||||||||| ||| ||||||||||||||  || ||
seq2  AAAATGCT-AAGTC-TGAAGGGTAAACTACACTTCTTTCTTAG--TTTCC  46

seq1  ATGGCAACAGCATATACCA-CAAATGATA-TCAGTGTGAGAGAGAAGAGG  97
      ||||||||||||||||||| ||||||||| |||||||||||||| ||| |
seq2  ATGGCAACAGCATATACCACCAAATGATATTCAGTGTGAGAGAG-AGA-G  94

seq1  CTGAGGGAAGGG-AGGGGTGGAGGGAAAGGGAGAGAGATGGAGGCAGA-T  145
      |||||||||||| |||||||  || ||||||||||||||| ||||||| |
seq2  CTGAGGGAAGGGAAGGGGTGAGGGAAAAGGGAGAGAGATGAAGGCAGATT  144

seq1  CT-AGAGACAGAGCTGGAGGGCCGTGGCAGCTGGGAGATGGC-AGGGGCC  193
      || |||||||||||||||||||||||||||||| |||||||| |||||||
seq2  CTAAGAGACAGAGCTGGAGGGCCGTGGCAGCTGAGAGATGGCAAGGGGCC  194

seq1  TTGTGGGGAGGTCTGGGGGGAGAGACCGAGATAAAGAGATATGGAGAGAG  243
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTGTGGGGAGGTCTGGGGGGAGAGACCGAGATAAAGAGATAT-GAGAGAG  243

seq1  AGACAG-AAAGATGAGGGGAGAGATGGAGAGAGACTGAAGAGGATGAAGA  292
      |||||| |||||||| ||||||||||||||||||||||||||||||||||
seq2  AGACAGAAAAGATGA-GGGAGAGATGGAGAGAGACTGAAGAGGATGAAGA  292

seq1  CAGGAGAAAGAGAGATGGAGGGAGATGGAAAGAGATGGACTGAGATGAAG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAAAGAGAGATGGAGGGAGATGGAAAGAGATGGACTGAGATGAAG  342

seq1  AGAAGTCAGAGAGATGAAAGGAGAGATAGATGGAGAGAGAGAGATAGCCG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCAGAGAGATGAAAGGAGAGATAGATGGAGAGAGAGAGATAGCCG  392

seq1  GAGAGATGGAGGCAGAGAAGTGTGGGAGGAGATGGAGAGAGACCAAGATA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATGGAGGCAGAGAAGTGTGGGAGGAGATGGAGAGAGACCAAGATA  442

seq1  GAGAGGTGGGGAGAGAGATGAAGAGGCACAGAGATACTGTGAGAGATAGA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTGGGGAGAGAGATGAAGAGGCACAGAGATACTGTGAGAGATAGA  492

seq1  GAGGAAGACGGGAAAGAAGGAGTAGGGATAAGTGGGGTGAAGGATGGAGC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGACGGGAAAGAAGGAGTAGGGATAAGTGGGGTGAAGGATGGAGC  542

seq1  AATATGGCAAACTGGTGAGAGACAGAAGAGAGCCTGCCAGTGGGGGAGGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGCAAACTGGTGAGAGACAGAAGAGAGCCTGCCAGTGGGGGAGGA  592

seq1  GCCCGGGAGGGTTAGGGCCTCAGGACAGATAGGCAGACTGGGAACTCTCC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGGGAGGGTTAGGGCCTCAGGACAGATAGGCAGACTGGGAACTCTCC  642

seq1  AAGGTATAGCATAGAGTTTAGGGGCAGAGCGGGAGGCCAGGGGCCATCAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATAGCATAGAGTTTAGGGGCAGAGCGGGAGGCCAGGGGCCATCAG  692

seq1  ACATCTTTGAAGTCAGAGGGCAGAAGTGATTAATGGATGATCAACGTTGA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTTGAAGTCAGAGGGCAGAAGTGATTAATGGATGATCAACGTTGA  742

seq1  TCAATAGATGGGTAGATCTTCTGGGAACAGAGGGACTCCAGCTCAGCCAC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAGATGGGTAGATCTTCTGGGAACAGAGGGACTCCAGCTCAGCCAC  792

seq1  AGGGTCCCTGACTCTCCCAAGTCCCCTCACTCACAGGCACTGCCACACAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCCTGACTCTCCCAAGTCCCCTCACTCACAGGCACTGCCACACAG  842

seq1  TTACACACCCACAGTAATGCTCAGGACCCACACATATAGCGTTCACCTCA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACACCCACAGTAATGCTCAGGACCCACACATATAGCGTTCACCTCA  892

seq1  CCTGAGTGCCCACCTGTGCCACCCTCCTGCCGGTCCTCCAAATCACCAGC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTGCCCACCTGTGCCACCCTCCTGCCGGTCCTCCAAATCACCAGC  942

seq1  AACGCCCAGTCCCTCTCATCAACTGGAGCCACACCCTGTCCACAGCCAGG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCCCAGTCCCTCTCATCAACTGGAGCCACACCCTGTCCACAGCCAGG  992

seq1  AAGGATGAGCCCTGACCCTGTGAGCCCCCTCTCATTCAGAATTC  1036
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGAGCCCTGACCCTGTGAGCCCCCTCTCATTCAGAATTC  1036