BAC Information

Click to search

BAC

Clone NameB6Ng01-128P16
Chromosome15 (Build37)
Map Location 96,505,773 - 96,633,199
singlet/doubletdoublet
Overlap geneSlc38a2, LOC667941
Upstream geneLOC100042684, LOC667849, EG629300, LOC667864, Tmem16f, LOC100043329, D030018L15Rik, LOC100043335, EG667869, LOC667874, LOC667894, Arid2, Sfrs2ip, Slc38a1
Downstream geneLOC546651, Slc38a4, Amigo2, BC038822, LOC100043354, LOC100042774, D15Ertd682e, Pp11r, Rapgef3, 4930570C03Rik, Hdac7a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128P16.bB6Ng01-128P16.g
ACCDH930686DH930687
length958488
definitionDH930686|Mus musculus domesticus DNA, BAC clone: B6Ng01-128P16, 5' end.DH930687|Mus musculus domesticus DNA, BAC clone: B6Ng01-128P16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,632,501 - 96,633,199)(96,505,773 - 96,506,266)
sequence
gaattccagtagggtgaggaggaaggaggggctctgagatagctggatca
ctgtataccctagaggactccagaaaggctggcatccttgaacttccagt
gataccggtcagcaaacttactggaaataatcggaaaatctctcaatctg
ctttagctgtttaacacagtggacattgcacaaccagagcctgacgtcat
cccgcctgtgaacagttacagataagcaaacgctcagcaaagagccaaag
aaaaacatacattctgtgaaatttaccagagcttctcatgtataacgtcc
aaagcaaagatgtaggctcatttttacactcttttgagcatttcttgcct
tcagtgaaacttcctggggttctttgaattaggatgttcccgtaggctca
gcatttggacacttggttcccagtttttggtactgcttgaggagaattag
ggggcctagcctttgtggaggaagaacatcgttgggggggcctctctcca
cttccagtttactctctctggttcctgttcacagctgaagatatgatctc
ccagcttcccccagctgccaccaggcctgctgcttgcttccatgcttcct
ccaccatgacggactcattcctctggtctctaagcctaagtagtctgttc
tataagtcaccattttatgacagcaacagagaagaaataatcccattccc
aatctcacatttagcaggcatagaagatgtcattaataggacagagttat
gtcagttcaacaagcaaatgcaaccaaagcttggtccagggagctagaga
gatggctcatcagttaagagcacttgatgctcttgcagaggatccaagtt
ccgttcccaccacccttttctgacagctcaaaattgcccataattccaat
tccaggagattcgacaccctcttctgtcctccatgggttcccagcacttg
agcataca
tccttactaagcgttatgctgctgggtggagctggtgcacacttttgatc
gcagcacttgggaggcagaggcagacggatctctgtgagttcgaggccag
cctggtctacagagtaagttccaggacagccaaagctacacagagaaacc
ctgtcacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccaaccaac
caatcaactaacctaccaaataaaatgaaagatgtggctcttgaacttaa
attagtccctaagtaattgctactaaaagggagtggggtggggtgggaag
gcgaaaccaaagggagattggggaaatccgtgaatccctggggagaatga
tatgatggctgtactttaattcctaaacgagtaaatcatgtaaacacgta
acaagcaaaaggaaagataaccagcaggtagcaaacgctcaaaatcagta
agtgcacagtaaaacctcgtcacgttcggcgcttacgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_96632501_96633199
seq2: B6Ng01-128P16.b_50_748 (reverse)

seq1  GGAATGGGATTATTTCTTCTCTGTTGCTGTCATAAAATGGTGACTTATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGGGATTATTTCTTCTCTGTTGCTGTCATAAAATGGTGACTTATAG  50

seq1  AACAGACTACTTAGGCTTAGAGACCAGAGGAATGAGTCCGTCATGGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACTACTTAGGCTTAGAGACCAGAGGAATGAGTCCGTCATGGTGGA  100

seq1  GGAAGCATGGAAGCAAGCAGCAGGCCTGGTGGCAGCTGGGGGAAGCTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCATGGAAGCAAGCAGCAGGCCTGGTGGCAGCTGGGGGAAGCTGGG  150

seq1  AGATCATATCTTCAGCTGTGAACAGGAACCAGAGAGAGTAAACTGGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATATCTTCAGCTGTGAACAGGAACCAGAGAGAGTAAACTGGAAGT  200

seq1  GGAGAGAGGCCCCCCCAACGATGTTCTTCCTCCACAAAGGCTAGGCCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAGGCCCCCCCAACGATGTTCTTCCTCCACAAAGGCTAGGCCCCC  250

seq1  TAATTCTCCTCAAGCAGTACCAAAAACTGGGAACCAAGTGTCCAAATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTCCTCAAGCAGTACCAAAAACTGGGAACCAAGTGTCCAAATGCT  300

seq1  GAGCCTACGGGAACATCCTAATTCAAAGAACCCCAGGAAGTTTCACTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTACGGGAACATCCTAATTCAAAGAACCCCAGGAAGTTTCACTGAA  350

seq1  GGCAAGAAATGCTCAAAAGAGTGTAAAAATGAGCCTACATCTTTGCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGAAATGCTCAAAAGAGTGTAAAAATGAGCCTACATCTTTGCTTTG  400

seq1  GACGTTATACATGAGAAGCTCTGGTAAATTTCACAGAATGTATGTTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTTATACATGAGAAGCTCTGGTAAATTTCACAGAATGTATGTTTTTC  450

seq1  TTTGGCTCTTTGCTGAGCGTTTGCTTATCTGTAACTGTTCACAGGCGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTCTTTGCTGAGCGTTTGCTTATCTGTAACTGTTCACAGGCGGGA  500

seq1  TGACGTCAGGCTCTGGTTGTGCAATGTCCACTGTGTTAAACAGCTAAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGTCAGGCTCTGGTTGTGCAATGTCCACTGTGTTAAACAGCTAAAGC  550

seq1  AGATTGAGAGATTTTCCGATTATTTCCAGTAAGTTTGCTGACCGGTATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGAGAGATTTTCCGATTATTTCCAGTAAGTTTGCTGACCGGTATCA  600

seq1  CTGGAAGTTCAAGGATGCCAGCCTTTCTGGAGTCCTCTAGGGTATACAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGTTCAAGGATGCCAGCCTTTCTGGAGTCCTCTAGGGTATACAGT  650

seq1  GATCCAGCTATCTCAGAGCCCCTCCTTCCTCCTCACCCTACTGGAATTC  699
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAGCTATCTCAGAGCCCCTCCTTCCTCCTCACCCTACTGGAATTC  699

seq1: chr15_96505773_96506266
seq2: B6Ng01-128P16.g_68_561

seq1  GAATTCTCCTTACTAAGCGTTATGCTGCTGGGTGGAGCTGGTGCACACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTACTAAGCGTTATGCTGCTGGGTGGAGCTGGTGCACACTT  50

seq1  TTGATCGCAGCACTTGGGAGGCAGAGGCAGACGGATCTCTGTGAGTTCGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCGCAGCACTTGGGAGGCAGAGGCAGACGGATCTCTGTGAGTTCGA  100

seq1  GGCCAGCCTGGTCTACAGAGTAAGTTCCAGGACAGCCAAAGCTACACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCCTGGTCTACAGAGTAAGTTCCAGGACAGCCAAAGCTACACAGA  150

seq1  GAAACCCTGTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC  200
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTGTCAC-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC  199

seq1  AACCAACCAATCAACTAACCTACCAAATAAAATGAAAGATGTGGCTCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAACCAATCAACTAACCTACCAAATAAAATGAAAGATGTGGCTCTTG  249

seq1  AACTTAAATTAGTCCCTAAGTAATTGCTACTAAAAGGGAGTGGGGTGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAATTAGTCCCTAAGTAATTGCTACTAAAAGGGAGTGGGGTGGGG  299

seq1  TGGGAAGGCGAAACCAAAGGGAGATTGGGGAAATCCGTGAATCCCTGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGGCGAAACCAAAGGGAGATTGGGGAAATCCGTGAATCCCTGGGG  349

seq1  AGAATGATATGATGGCTGTACTTTAATTCCTAAACGAGTAAATCATGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGATATGATGGCTGTACTTTAATTCCTAAACGAGTAAATCATGTAA  399

seq1  ACACGTAACAAGCAGAAGGAAAGATAACCAGCAGGTAGCAGACGCACAGA  450
      |||||||||||||| ||||||||||||||||||||||||| |||| || |
seq2  ACACGTAACAAGCAAAAGGAAAGATAACCAGCAGGTAGCAAACGCTCAAA  449

seq1  AGCAGCAAGCGCACAGTAAAACCTCGTCACG-TCGGCGCTTACGC  494
      | ||| ||| ||||||||||||||||||||| |||||||||||||
seq2  ATCAGTAAGTGCACAGTAAAACCTCGTCACGTTCGGCGCTTACGC  494