BAC Information

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BAC

Clone NameB6Ng01-140M15
Chromosome15 (Build37)
Map Location 15,075,915 - 15,156,827
singlet/doubletdoublet
Overlap geneLOC100040033
Upstream geneLOC674819, LOC100040024
Downstream geneLOC100040046, EG239341, LOC100040087, LOC624183
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140M15.bB6Ng01-140M15.g
ACCDH939421DH939422
length1,0951,094
definitionDH939421|Mus musculus domesticus DNA, BAC clone: B6Ng01-140M15, 5' end.DH939422|Mus musculus domesticus DNA, BAC clone: B6Ng01-140M15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,075,915 - 15,077,020)(15,155,713 - 15,156,827)
sequence
gaattctttctcccttatgtctgagagcatcacacttaaaatgacttctc
tggctgaagtcaagttacttattggaagctaagtggtttaactatcctca
ctaacactctcattcacggtccactgagtacactaaattctgaatcttat
gaccagtaggaaaagaatgaccttttccagtgaactgtatataagcaaaa
gggagacattgtttctaaaacagtgtccaaataaacatgaaacattatag
ctcatgactattatctcatttccattcaactagaaaacaaaatattatgg
tgacaaaggcaaacatgaaaacatgcatttaccatttattaactcacaga
aacttacttcttaaaaataagaggaattattaattatactatgtaattac
atgcaattattagacattgatttcttatacatatttattgctagatacag
atttttttcattttatttctttaaatgttttgagctatatactttgaaaa
gtcctttgaataatattaagtatatcagagatactctcgtgcattaagag
ttaatagaatttaatttaaatagtttcttttcatagagtcatctgattgt
tttccctatgaattcttttcagttttatacaatatttggatagaaaataa
tgtattatttgatgctttattgggagatgaattttataaatactttgtac
taacagtgcttaagacgtattaccgtttaacaatgcagttcccagttttc
cattgctttatataatgatataaaccacagcacaatcctaaatcaaatag
gacacttgatgtttacaactatgaaatacatgctctgaaatctgcaacac
tcatttaaaccataaattggccacactgcaaaggtaattattctttattt
ctcctcacattctcaatgctgaaaataattaattttctagtataatatcc
agctgtttctaagcttactaacatgtgatcttggaacatattaacaggaa
catttgagctatttctgtccagtgcacaaatgattaccctgccaaatacc
caatttgtggaagttcattgtgagaaccacacctcccctcctagg
gaattcatcattaagtataagaatttataaattgagaattatcattaatt
tataactcaaaagatccttatagttaatttgtattaactacagattattt
gatagtctcagagaacactgtttaaaagcagactttacactttgatatat
aatcttcaggggctgtgagttttattggaaggtgtctttgaatttaagtt
tattttaaagaaagtgagtgttatcacttaataagttggtagaaaccaat
atttccatgattttataaattagtgatatctggtcaattgatggtttctc
tgtgaatttatcacctcttgtaactagatttttcagtggtttcagtgtca
atattattattacacacacagtttaactagagttcaaacaaaaaaacttc
tcaggcatctcttttctacagattaaacccagaactctgaacatagcaca
agcattattagaattttagatgaaattttaataatgcacagaaacatact
tccaaatttctacactgacaaatagtttattgcagaataataattgtata
gtttgtggaatattgttaaaaaatatctgtgtatactatagtaattacca
tgcaacttttttctgtttttttttctttctttttttttggttatttattc
cttgtctgcttttccttcatggaaagtgtgtatggattattgttctataa
aacacagtagaattctcaggagatgctgcatccggagaggcatttactat
acacatgtgctactagaagcacaatctgcgtactttaaccctcttctatt
tcttgaaaaccacattagagattatgttaagtgttcatgaagacattttc
taaaataaacagtaccatcatttatgaagatgtttttttagaaataaaca
gtatcatatttcttgagaaaaaatagagatcataagatatttttttctgt
ctgtacatcatcgctgagaagcagagaacagcttagaaactgatagaaca
acataaatacgatgctataacctcagctacataattctagatccaagaga
aatatgtctgctatgcagcatgattatctttccatcagccatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_15075915_15077020
seq2: B6Ng01-140M15.b_47_1141

seq1  GAATTCTTTCTCCCTTATGTCTGAGAGCATCACACTTAAAATGACTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTCCCTTATGTCTGAGAGCATCACACTTAAAATGACTTCTC  50

seq1  TGGCTGAAGTCAAGTTACTTATTGGAAGCTAAGTGGTTTAACTATCCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGAAGTCAAGTTACTTATTGGAAGCTAAGTGGTTTAACTATCCTCA  100

seq1  CTAACACTCTCATTCACGGTCCACTGAGTACACTAAATTCTGAATCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACACTCTCATTCACGGTCCACTGAGTACACTAAATTCTGAATCTTAT  150

seq1  GACCAGTAGGAAAAGAATGACCTTTTCCAGTGAACTGTATATAAGCAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGTAGGAAAAGAATGACCTTTTCCAGTGAACTGTATATAAGCAAAA  200

seq1  GGGAGACATTGTTTCTAAAACAGTGTCCAAATAAACATGAAACATTATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACATTGTTTCTAAAACAGTGTCCAAATAAACATGAAACATTATAG  250

seq1  CTCATGACTATTATCTCATTTCCATTCAACTAGAAAACAAAATATTATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGACTATTATCTCATTTCCATTCAACTAGAAAACAAAATATTATGG  300

seq1  TGACAAAGGCAAACATGAAAACATGCATTTACCATTTATTAACTCACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAGGCAAACATGAAAACATGCATTTACCATTTATTAACTCACAGA  350

seq1  AACTTACTTCTTAAAAATAAGAGGAATTATTAATTATACTATGTAATTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTACTTCTTAAAAATAAGAGGAATTATTAATTATACTATGTAATTAC  400

seq1  ATGCAATTATTAGACATTGATTTCTTATACATATTTATTGCTAGATACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATTATTAGACATTGATTTCTTATACATATTTATTGCTAGATACAG  450

seq1  ATTTTTTTCATTTTATTTCTTTAAATGTTTTGAGCTATATACTTTGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTCATTTTATTTCTTTAAATGTTTTGAGCTATATACTTTGAAAA  500

seq1  GTCCTTTGAATAATATTAAGTATATCAGAGATACTCTCGTGCATTAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTGAATAATATTAAGTATATCAGAGATACTCTCGTGCATTAAGAG  550

seq1  TTAATAGAATTTAATTTAAATAGTTTCTTTTCATAGAGTCATCTGATTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAGAATTTAATTTAAATAGTTTCTTTTCATAGAGTCATCTGATTGT  600

seq1  TTTCCCTATGAATTCTTTTCAGTTTTATACAATATTTGGATAGAAAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTATGAATTCTTTTCAGTTTTATACAATATTTGGATAGAAAATAA  650

seq1  TGTATTATTTGATGCTTTATTGGGAGATGAATTTTATAAATACTTTGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTATTTGATGCTTTATTGGGAGATGAATTTTATAAATACTTTGTAC  700

seq1  TAACAGTGCTTAAGACGTATTACCGTTTAACAATGCAGTTCCCAGTTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTGCTTAAGACGTATTACCGTTTAACAATGCAGTTCCCAGTTTTC  750

seq1  CATTGCTTTATATAATGATATAAACCACAGCACAATCCTAAATCAAATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTTTATATAATGATATAAACCACAGCACAATCCTAAATCAAATAG  800

seq1  GACACTTGATGTTTACAACTATGAAATACATGCTCTGAAATCTGCAACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTGATGTTTACAACTATGAAATACATGCTCTGAAATCTGCAACAC  850

seq1  TCATTTAAACCATAAATTGGCCACACTGCAAAGGTAATTATTCTTTTATT  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCATTTAAACCATAAATTGGCCACACTGCAAAGGTAATTATTC-TTTATT  899

seq1  TCTCCTCACATTCTCAATGCTGAAAATAATTAATTTTCTTAGTTATAATA  950
      |||||||||||||||||||||||||||||||||||||| ||| |||||||
seq2  TCTCCTCACATTCTCAATGCTGAAAATAATTAATTTTC-TAG-TATAATA  947

seq1  TCCAGCTGTTTCTAAGCTTACTAACATGTGATCTTGGAACATATTAACAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCCAGCTGTTTCTAAGCTTACTAACATGTGATCTTGGAACATATTAACA-  996

seq1  GGACCATTTGAGCTATTTCTGTCCAGTGGCAACAAATGATTTAACACTGC  1050
      ||| ||||||||||||||||||||||||   ||||||||||  || ||||
seq2  GGAACATTTGAGCTATTTCTGTCCAGTG--CACAAATGATT--ACCCTGC  1042

seq1  AAAATACCCAATTTGTGAAAGTTCATTGTTGAGGAACCAACACTTCTCCT  1100
       |||||||||||||||| |||||||||| ||| ||||| |||| || |||
seq2  CAAATACCCAATTTGTGGAAGTTCATTG-TGA-GAACC-ACACCTCCCCT  1089

seq1  CCTAGG  1106
      ||||||
seq2  CCTAGG  1095

seq1: chr15_15155713_15156827
seq2: B6Ng01-140M15.g_67_1160 (reverse)

seq1  TGATGGCTGATTGTGAAAGATAAATACAATGGCTTGCATAGCAGACATAA  50
      |||||||||||   ||||||||   |  |||   |||||||||||||| |
seq2  TGATGGCTGAT--GGAAAGATA---ATCATG--CTGCATAGCAGACAT-A  42

seq1  TTTCTCTGGATTCTTAGAATTTATTGTTAGCCTGAGGTTATAGCATCGTA  100
      ||||||| |  || ||||| ||||   ||| |||||||||||||||||||
seq2  TTTCTCTTGGATC-TAGAA-TTAT--GTAG-CTGAGGTTATAGCATCGTA  87

seq1  TTTATGTTGTCTCTATTCAGTTTCCTAAGCTGTTCTCTGCTTTCTCAGCG  150
      |||||||||| |||| ||||||| |||||||||||||||| |||||||||
seq2  TTTATGTTGT-TCTA-TCAGTTT-CTAAGCTGTTCTCTGC-TTCTCAGCG  133

seq1  ATGATGTACAGACAG-AAAAAATATCTTTATGATCTCTATTTTTTTCTCC  199
      ||||||||||||||| |||||||||| |||||||||||| |||||||| |
seq2  ATGATGTACAGACAGAAAAAAATATC-TTATGATCTCTA-TTTTTTCT-C  180

seq1  AAGAAATAATGGTACTGTTTATTTCTAAAAAAACATCTTCATAAAATGAT  249
      ||||||| ||| |||||||||||||||||||||||||||||| |||||||
seq2  AAGAAAT-ATGATACTGTTTATTTCTAAAAAAACATCTTCAT-AAATGAT  228

seq1  GGTACTGTTTATTTTAGAAAATGTCTTCATGAACACTTAACATAATCTCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTGTTTATTTTAGAAAATGTCTTCATGAACACTTAACATAATCTCT  278

seq1  AATGTGGTTTTCAAGAAATAGAAGAGGGTTAAAGTACGCAGATTGTGCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGTTTTCAAGAAATAGAAGAGGGTTAAAGTACGCAGATTGTGCTT  328

seq1  CTAGTAGCACATGTGTATAGTAAATGCCTCTCCGGATGCAGCATCTCCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAGCACATGTGTATAGTAAATGCCTCTCCGGATGCAGCATCTCCTG  378

seq1  AGAATTCTACTGTGTTTTATAGAACAATAATCCATACACACTTTCCATGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCTACTGTGTTTTATAGAACAATAATCCATACACACTTTCCATGA  428

seq1  AGGAAAAGCAGACAAGGAATAAATAACCAAAAAAAAAGAAAGAAAAAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGCAGACAAGGAATAAATAACCAAAAAAAAAGAAAGAAAAAAAA  478

seq1  ACAGAAAAAAGTTGCATGGTAATTACTATAGTATACACAGATATTTTTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAAAAGTTGCATGGTAATTACTATAGTATACACAGATATTTTTTA  528

seq1  ACAATATTCCACAAACTATACAATTATTATTCTGCAATAAACTATTTGTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATTCCACAAACTATACAATTATTATTCTGCAATAAACTATTTGTC  578

seq1  AGTGTAGAAATTTGGAAGTATGTTTCTGTGCATTATTAAAATTTCATCTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGAAATTTGGAAGTATGTTTCTGTGCATTATTAAAATTTCATCTA  628

seq1  AAATTCTAATAATGCTTGTGCTATGTTCAGAGTTCTGGGTTTAATCTGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTAATAATGCTTGTGCTATGTTCAGAGTTCTGGGTTTAATCTGTA  678

seq1  GAAAAGAGATGCCTGAGAAGTTTTTTTGTTTGAACTCTAGTTAAACTGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGATGCCTGAGAAGTTTTTTTGTTTGAACTCTAGTTAAACTGTG  728

seq1  TGTGTAATAATAATATTGACACTGAAACCACTGAAAAATCTAGTTACAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAATAATAATATTGACACTGAAACCACTGAAAAATCTAGTTACAAG  778

seq1  AGGTGATAAATTCACAGAGAAACCATCAATTGACCAGATATCACTAATTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATAAATTCACAGAGAAACCATCAATTGACCAGATATCACTAATTT  828

seq1  ATAAAATCATGGAAATATTGGTTTCTACCAACTTATTAAGTGATAACACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATCATGGAAATATTGGTTTCTACCAACTTATTAAGTGATAACACT  878

seq1  CACTTTCTTTAAAATAAACTTAAATTCAAAGACACCTTCCAATAAAACTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCTTTAAAATAAACTTAAATTCAAAGACACCTTCCAATAAAACTC  928

seq1  ACAGCCCCTGAAGATTATATATCAAAGTGTAAAGTCTGCTTTTAAACAGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCCTGAAGATTATATATCAAAGTGTAAAGTCTGCTTTTAAACAGT  978

seq1  GTTCTCTGAGACTATCAAATAATCTGTAGTTAATACAAATTAACTATAAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTGAGACTATCAAATAATCTGTAGTTAATACAAATTAACTATAAG  1028

seq1  GATCTTTTGAGTTATAAATTAATGATAATTCTCAATTTATAAATTCTTAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTTGAGTTATAAATTAATGATAATTCTCAATTTATAAATTCTTAT  1078

seq1  ACTTAATGATGAATTC  1115
      ||||||||||||||||
seq2  ACTTAATGATGAATTC  1094