BAC Information

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BAC

Clone NameB6Ng01-143J11
Chromosome15 (Build37)
Map Location 25,429,022 - 25,594,333
singlet/doubletdoublet
Overlap geneMyo10
Upstream geneLOC666999, LOC100040492, LOC100040499, LOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583
Downstream geneLOC100040602, Ppia-ps15_175.1, 1810015C04Rik, Zfp622, AK162044, Fbxl7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143J11.bB6Ng01-143J11.g
ACCDH941489DH941490
length1,0621,044
definitionDH941489|Mus musculus domesticus DNA, BAC clone: B6Ng01-143J11, 5' end.DH941490|Mus musculus domesticus DNA, BAC clone: B6Ng01-143J11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,593,268 - 25,594,333)(25,429,022 - 25,430,065)
sequence
gaattcctctctcccctcagacctgtcacgtccctctgacgccctacttt
gggctgagacactggaaacacatggaaagagtgacaccagagctgtcaga
ccagatttctttattagcaaacagccatgtccaaaaagaacatttacttc
agacatccactaagactgttctctcaaatgttactccatacctgaaaaat
tccaggaaagggcttccaagtgcttgaatgactttattcatttttttaaa
tttatgcactagagactgcagtgggtgaaaattttgaatgacctcaaaat
atacatgcacatatccacacatgcatatatacactaaagttagaatataa
aatggaagccgggtgtggtggcgcatgcttttaatcccagcacttgggag
gcagaggcaggcagatttctgagttcaaggccagcctggtctacaaagtg
agttccaggacatccagggctacagagagaaaccctgccttgaaaaacaa
aacaaacaaacaaacaaaaaagtgcttaaaaaataatatatatatataaa
atggtaattaatttgcatattcaccacaaaaccacaaatgtctgccatga
ctcacttacattattttcaacagaaaagaagcccacagctccatatccta
atttattaactttgtctacttaataagaatgaagtatttattatacatta
ccaaattactataaatctggcctaggggttgggaagatggtacagttggc
aaagtgcttgctgtgcatgagaaacaggctgagttaagaaccccccagaa
tgtacacaaaaagccaggcacagcagcatacaactttaaccccagtatgg
gagaggcggcattggaggctctgcgggcttgctggccggctagtctaaag
taattgatgggcttatttgatgcgctttaggttcagtgaaaggacttctg
cttagagaaggataacgtagagttgattgagaagacactgaacacctcat
ctctggcctctataccatgcacatcccattcatgtttgtaccacacacac
actccacacaca
gaattctctctgctttagttgataaaaaaaaaaaataactgaaatggggg
gctggcccatctctctggcttctggtagcttcagcccttcgctgcctggg
aaggcagcaccccttccagctcacgggaacaccgccaacgttacagaaca
aagtctatcccacttttataattgcaagtgagagccaatgtgagtcaaat
tgtcattttgtgttttggcaaaaactctatcagtacagtgaaatcttacc
actaggaattctgtactctgtgcaaggctccagtgggaacccctttttgc
caagacaacaagttaatgccttgccataattactgtgaaacattttggtt
ttcactctgcttttgggggggcggggatggtgcaaagaaattatttttaa
gttgaatgagcaatgtgaatgattttgagaagtcaagaaaaaaaaaagtc
gttctctcagaaaaacattaacagggctggaaattagtagagttgtcctt
caacaggtgtgaggctcatgattcaatcctgagtactgcaaaataaataa
acaagttaattaaccaaccaatcaacaatgagatatttgttaaatggcaa
atagataacatagacaagaactgaatagtcattgactaagacaggttgaa
gtagaaacccattttcagaaagaaacaaaatctccaaggagaggcccaca
caaattatttcaagagaacggagtgtcaaacaccaggaatatgaagtgtg
taatatgtaatatgtaaatatataaggaaacctcatactggattttcttg
ttcctcttctaatatagacgctgttttccacattgaaccttgggtgagat
caaagctcaggcagctagcagcatttaagattgctaagccttaagtaaaa
agtacctggtagcagtacttacacctcggcaagttcacaggttctccatc
ataggcagggacatgaatgcaatgtgcatcttaacttcgaatggctaaga
gaatcactgtccctgctccagactcatggatcccctgccactca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_25593268_25594333
seq2: B6Ng01-143J11.b_42_1103 (reverse)

seq1  TGTGTGTGTGTGTGTGTGTGT-GTACATACATGAATGGGTTTGTGCATGT  49
      |||||||| | |||||||||| ||||| |||||||||||  |||||||| 
seq2  TGTGTGTG-GAGTGTGTGTGTGGTACAAACATGAATGGG-ATGTGCATG-  47

seq1  GTATAGAGGCCAGAGATGA-GTGTTCAGTGTCTTTCTCAATCAACTCTTA  98
      ||||||||||||||||||| |||||||||||| |||||||||||||||  
seq2  GTATAGAGGCCAGAGATGAGGTGTTCAGTGTC-TTCTCAATCAACTCT--  94

seq1  CCTTTTTCTTTCTCTTAGCAGAAGT-CTTTCACTGAACCTAAAGCGCATC  147
       | || || |||||| ||||||||| ||||||||||||||||||||||||
seq2  ACGTTATCCTTCTCTAAGCAGAAGTCCTTTCACTGAACCTAAAGCGCATC  144

seq1  -AATTAGCCCATCAATTACTTTAGACTAGCCGGCCAGCAAGCCCGCAGAG  196
       ||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGCCCATCAATTACTTTAGACTAGCCGGCCAGCAAGCCCGCAGAG  194

seq1  CCTCCAATTGCCGCCTCTCCCATACTGGGGTTAAAGTTGTATGCTGCTGT  246
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAA-TGCCGCCTCTCCCATACTGGGGTTAAAGTTGTATGCTGCTGT  243

seq1  GCCTGGCTTTTTGTGTACATTCTGGGGGGTTCTTAACTCAGCCTGTTTCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGCTTTTTGTGTACATTCTGGGGGGTTCTTAACTCAGCCTGTTTCT  293

seq1  CATGCACAGCAAGCACTTTGCCAACTGTACCATCTTCCCAACCCCCTAGG  346
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CATGCACAGCAAGCACTTTGCCAACTGTACCATCTTCCCAA-CCCCTAGG  342

seq1  CCAGATTTATAGTAATTTGGTAATGTATAATAAATACTTCATTCTTATTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTTATAGTAATTTGGTAATGTATAATAAATACTTCATTCTTATTA  392

seq1  AGTAGACAAAGTTAATAAATTAGGATATGGAGCTGTGGGCTTCTTTTCTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGACAAAGTTAATAAATTAGGATATGGAGCTGTGGGCTTCTTTTCTG  442

seq1  TTGAAAATAATGTAAGTGAGTCATGGCAGACATTTGTGGTTTTGTGGTGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATAATGTAAGTGAGTCATGGCAGACATTTGTGGTTTTGTGGTGA  492

seq1  ATATGCAAATTAATTACCATTTTATATATATATATTATTTTTTAAGCACT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAAATTAATTACCATTTTATATATATATATTATTTTTTAAGCACT  542

seq1  TTTTTGTTTGTTTGTTTGTTTTGTTTTTCAAGGCAGGGTTTCTCTCTGTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTGTTTGTTTGTTTTGTTTTTCAAGGCAGGGTTTCTCTCTGTA  592

seq1  GCCCTGGATGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGATGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTGAACTC  642

seq1  AGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAAGCATGCGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAAGCATGCGC  692

seq1  CACCACACCCGGCTTCCATTTTATATTCTAACTTTAGTGTATATATGCAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACACCCGGCTTCCATTTTATATTCTAACTTTAGTGTATATATGCAT  742

seq1  GTGTGGATATGTGCATGTATATTTTGAGGTCATTCAAAATTTTCACCCAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGATATGTGCATGTATATTTTGAGGTCATTCAAAATTTTCACCCAC  792

seq1  TGCAGTCTCTAGTGCATAAATTTAAAAAAATGAATAAAGTCATTCAAGCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTCTCTAGTGCATAAATTTAAAAAAATGAATAAAGTCATTCAAGCA  842

seq1  CTTGGAAGCCCTTTCCTGGAATTTTTCAGGTATGGAGTAACATTTGAGAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAGCCCTTTCCTGGAATTTTTCAGGTATGGAGTAACATTTGAGAG  892

seq1  AACAGTCTTAGTGGATGTCTGAAGTAAATGTTCTTTTTGGACATGGCTGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCTTAGTGGATGTCTGAAGTAAATGTTCTTTTTGGACATGGCTGT  942

seq1  TTGCTAATAAAGAAATCTGGTCTGACAGCTCTGGTGTCACTCTTTCCATG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAATAAAGAAATCTGGTCTGACAGCTCTGGTGTCACTCTTTCCATG  992

seq1  TGTTTCCAGTGTCTCAGCCCAAAGTAGGGCGTCAGAGGGACGTGACAGGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCAGTGTCTCAGCCCAAAGTAGGGCGTCAGAGGGACGTGACAGGT  1042

seq1  CTGAGGGGAGAGAGGAATTC  1066
      ||||||||||||||||||||
seq2  CTGAGGGGAGAGAGGAATTC  1062

seq1: chr15_25429022_25430065
seq2: B6Ng01-143J11.g_68_1111

seq1  GAATTCTCTCTGCTTTAGTTGATAAAAAAAAAAAATAACTGAAATGGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGCTTTAGTTGATAAAAAAAAAAAATAACTGAAATGGGGG  50

seq1  GCTGGCCCATCTCTCTGGCTTCTGGTAGCTTCAGCCCTTCGCTGCCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCCATCTCTCTGGCTTCTGGTAGCTTCAGCCCTTCGCTGCCTGGG  100

seq1  AAGGCAGCACCCCTTCCAGCTCACGGGAACACCGCCAACGTTACAGAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGCACCCCTTCCAGCTCACGGGAACACCGCCAACGTTACAGAACA  150

seq1  AAGTCTATCCCACTTTTATAATTGCAAGTGAGAGCCAATGTGAGTCAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTATCCCACTTTTATAATTGCAAGTGAGAGCCAATGTGAGTCAAAT  200

seq1  TGTCATTTTGTGTTTTGGCAAAAACTCTATCAGTACAGTGAAATCTTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTTGTGTTTTGGCAAAAACTCTATCAGTACAGTGAAATCTTACC  250

seq1  ACTAGGAATTCTGTACTCTGTGCAAGGCTCCAGTGGGAACCCCTTTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGAATTCTGTACTCTGTGCAAGGCTCCAGTGGGAACCCCTTTTTGC  300

seq1  CAAGACAACAAGTTAATGCCTTGCCATAATTACTGTGAAACATTTTGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAACAAGTTAATGCCTTGCCATAATTACTGTGAAACATTTTGGTT  350

seq1  TTCACTCTGCTTTTGGGGGGGCGGGGATGGTGCAAAGAAATTATTTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTCTGCTTTTGGGGGGGCGGGGATGGTGCAAAGAAATTATTTTTAA  400

seq1  GTTGAATGAGCAATGTGAATGATTTTGAGAAGTCAAGAAAAAAAAAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATGAGCAATGTGAATGATTTTGAGAAGTCAAGAAAAAAAAAAGTC  450

seq1  GTTCTCTCAGAAAAACATTAACAGGGCTGGAAATTAGTAGAGTTGTCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTCAGAAAAACATTAACAGGGCTGGAAATTAGTAGAGTTGTCCTT  500

seq1  CAACAGGTGTGAGGCTCATGATTCAATCCTGAGTACTGCAAAATAAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGTGTGAGGCTCATGATTCAATCCTGAGTACTGCAAAATAAATAA  550

seq1  ACAAGTTAATTAACCAACCAATCAACAATGAGATATTTGTTAAATGGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTAATTAACCAACCAATCAACAATGAGATATTTGTTAAATGGCAA  600

seq1  ATAGATAACATAGACAAGAACTGAATAGTCATTGACTAAGACAGGTTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAACATAGACAAGAACTGAATAGTCATTGACTAAGACAGGTTGAA  650

seq1  GTAGAAACCCA-TTTCAGAAAGAAACAAAATCTCCAAGGAGAGGCCCACA  699
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAACCCATTTTCAGAAAGAAACAAAATCTCCAAGGAGAGGCCCACA  700

seq1  CAAATTA-TTCAAGAGAACGGAGTGTCAAACACCAGGAATATGAAGTGTG  748
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATTTCAAGAGAACGGAGTGTCAAACACCAGGAATATGAAGTGTG  750

seq1  TAATATGTAATATGTAAATATAT-AGGAAACCTCATACTGGATTTTCTTG  797
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAATATGTAATATGTAAATATATAAGGAAACCTCATACTGGATTTTCTTG  800

seq1  TTCCTCTTCTATAATAGACGCTGTTTTCCACATTG-ACCTTGGGTGAGAT  846
      |||||||||||  |||||||||||||||||||||| ||||||||||||||
seq2  TTCCTCTTCTAATATAGACGCTGTTTTCCACATTGAACCTTGGGTGAGAT  850

seq1  CAAAGCTCAGGCAAGCTAAGCAGCA-TTAAGATTGCTAAGCCTTAAGTAA  895
      |||||||||||| |||| ||||||| ||||||||||||||||||||||||
seq2  CAAAGCTCAGGC-AGCT-AGCAGCATTTAAGATTGCTAAGCCTTAAGTAA  898

seq1  AAAGATACACTGTAAGCAGTAACTAACACTCAGCCAAGTTCACAGGTTCT  945
      |||| ||| |||  |||||| ||| ||||   | ||||||||||||||||
seq2  AAAG-TAC-CTGGTAGCAGT-ACTTACACCTCGGCAAGTTCACAGGTTCT  945

seq1  CCA-CATAGGCAGGGACATGAAATGCAATGTGCATC-TAACTCAGA--TG  991
      ||| |||||||||||||||| ||||||||||||||| |||||  ||   |
seq2  CCATCATAGGCAGGGACATG-AATGCAATGTGCATCTTAACTTCGAATGG  994

seq1  CTTAGAGAATCAACTGTCACCTGCTCAAGACTCATGGATCCCACTGCCAC  1041
      || |||||||| |||||| ||||||| ||||||||||||||| |||||||
seq2  CTAAGAGAATC-ACTGTC-CCTGCTCCAGACTCATGGATCCC-CTGCCAC  1041

seq1  TCA  1044
      |||
seq2  TCA  1044