BAC Information

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BAC

Clone NameB6Ng01-145N02
Chromosome15 (Build37)
Map Location 51,058,847 - 51,221,175
singlet/doubletdoublet
Overlap genenone
Upstream geneTrps1, LOC100039644
Downstream geneLOC100039662, Eif3s3, LOC100039679, D530033C11Rik, Rad21, Aard, LOC100039720, LOC665219, Slc30a8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145N02.bB6Ng01-145N02.g
ACCDH943121DH943122
length1,155527
definitionDH943121|Mus musculus domesticus DNA, BAC clone: B6Ng01-145N02, 5' end.DH943122|Mus musculus domesticus DNA, BAC clone: B6Ng01-145N02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,220,014 - 51,221,175)(51,058,847 - 51,059,378)
sequence
gaattctaaaataaacagagacaaataaactctctactcttaaaaacaca
aattctggaacatatgacaggtaaaggaataacaatgaagaaagggaatg
aaaaagatgatgtcagagactaataactgggctgaaatccaaggaagagg
cggtgtatgaaagaggcatggaatggagaatgggaagtagtctgccactt
taaccaatttgcacaggtatggtggtctgtcaatgtttccactaccttga
cgtggtccctgtataagtctgtctatgtttttttgttcaatggaataagt
tggttataactcagtatcaaagacaaaactacacagacagttagctctca
ttgtataaatacacatacattttagggacttggaaggaatggaaacttgt
ataaaggcttagctatatagtatctcctagtaatgtcggaaggtataccc
ataaattcttgcccacatgattgcctaaacatgggctgaataaggataac
agcaataaatatgctagcaaggatgaacaaaagctgcaagccaagacaca
gagtaaaggcaacaggaaaatgctgagaagctgagaaactgtcttcctca
ggaaaaagcctgtaaattggttatcctataccacagactgagccctaaaa
atatgcatacaaatgacattacataagctatctatctatctatctatcta
tctatctatctatctatctatctatctatctatctatctatctacctatc
tatctatctatcatggtaggaattagtaaaaaagacccaagaacttataa
cagagcatggagaatggtttagagaaaagaaaagtaacaagagagtagtg
gtactgaaccatcctaggccacagcatgaaaccttgtctcagaaaaccaa
ctaaccaatagtacttatttgtttcctgggtgatttggtatgtgaatgaa
ttattcagtgattaaagtaaatgaaactatgctctggaaattatttcaaa
cattagggagtcacgtcaaggtattggcttgaaaccacatatcatacaca
cctactcatcatatattttccaagtatggtataaaaagacattgaacttc
tcagaatggtctctatgaaggattgtttttacagtaaggtgtgcactgga
gagtt
accctttttgtctacaagaaaacaacataaatttaaagacaagaataagg
aaagatgaaagaaattaagtagctattttctgatagcattattaatttac
ttcaattgaaagtgctaatgggctgggtggtggtggcacatgcctttagt
cccagcactcaggaggcagaggcaggtggatttctgagttcgaggccagc
ctggtctacaaggtgagttccaggacagccagggctatacagagaaacct
tgtttcagaaaaaaaaaaaagaaaaaaaaaaaaagaaagaaaagaaagaa
agaaggaaggaaggaagggagagagagagagaaagagagagagagggaga
gagagagagagagagaaagcaagctatcagaaataaatattttcttttta
tcttatttcaattattttgttgtttttgaggctagatctcaatagtaaac
ctaggtccgcctgagaatttgtggcaatactcctgtatttccagaatttt
gtattttgcaataccctcccaaattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_51220014_51221175
seq2: B6Ng01-145N02.b_44_1198 (reverse)

seq1  AACTCTTCCAGTGCACACC-TACTGAAAAAACACATCCTTCATATGAGAC  49
      ||||| ||||||||||||| ||||| ||||||| |||||||||| |||||
seq2  AACTC-TCCAGTGCACACCTTACTGTAAAAACA-ATCCTTCATA-GAGAC  47

seq1  CAATCCTGAGAAAGTTTCCAATGTCTTTTTATACCCATACTTTGAAAAAA  99
      | || ||||| |||||  ||||||||||||||| |||||||| |||||  
seq2  C-ATTCTGAG-AAGTT--CAATGTCTTTTTATA-CCATACTTGGAAAA--  90

seq1  TTATATGATGAGTTAGGTGTGTATGATATTGTGGTTTCCAGCC-ATACCT  148
       ||||||||||| ||||||||||||||| ||||||||| |||| ||||||
seq2  -TATATGATGAG-TAGGTGTGTATGATA-TGTGGTTTCAAGCCAATACCT  137

seq1  TGACGTGACTCCCTAATGTTTGAAATAATTTCCAAGAGCATAGTTTCATT  198
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGACGTGACTCCCTAATGTTTGAAATAATTTCC-AGAGCATAGTTTCATT  186

seq1  TACTTTAATCACTGAATAATTCATTCACATACCAAATCACCCAGGAAACA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAATCACTGAATAATTCATTCACATACCAAATCACCCAGGAAACA  236

seq1  AAT-AGTACTATTGGTTAGTTGGTTTTCTGAGACAAGGTTTCATGCTGTG  297
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTACTATTGGTTAGTTGGTTTTCTGAGACAAGGTTTCATGCTGTG  286

seq1  GCCTAGGATGGTTCAGTACCACTACTCTCTTGTTACTTTTCTTTTCTCTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGGATGGTTCAGTACCACTACTCTCTTGTTACTTTTCTTTTCTCTA  336

seq1  AACCATTCTCCATGCTCTGTTATAAGTTCTTGGGTCTTTTTTACTAATTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTCTCCATGCTCTGTTATAAGTTCTTGGGTCTTTTTTACTAATTC  386

seq1  CTACCATGATAGATAGATAGATAGG----TAGATAGATAGATAGATAGAT  443
      |||||||||||||||||||||||||    |||||||||||||||||||||
seq2  CTACCATGATAGATAGATAGATAGGTAGATAGATAGATAGATAGATAGAT  436

seq1  AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGCTTATGTA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGCTTATGTA  486

seq1  ATGTCATTTGTATGCATATTTTTAGGGCTCAGTCTGTGGTATAGGATAAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATTTGTATGCATATTTTTAGGGCTCAGTCTGTGGTATAGGATAAC  536

seq1  CAATTTACAGGCTTTTTCCTGAGGAAGACAGTTTCTCAGCTTCTCAGCAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTACAGGCTTTTTCCTGAGGAAGACAGTTTCTCAGCTTCTCAGCAT  586

seq1  TTTCCTGTTGCCTTTACTCTGTGTCTTGGCTTGCAGCTTTTGTTCATCCT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTTGCCTTTACTCTGTGTCTTGGCTTGCAGCTTTTGTTCATCCT  636

seq1  TGCTAGCATATTTATTGCTGTTATCCTTATTCAGCCCATGTTTAGGCAAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCATATTTATTGCTGTTATCCTTATTCAGCCCATGTTTAGGCAAT  686

seq1  CATGTGGGCAAGAATTTATGGGTATACCTTCCGACATTACTAGGAGATAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGGCAAGAATTTATGGGTATACCTTCCGACATTACTAGGAGATAC  736

seq1  TATATAGCTAAGCCTTTATACAAGTTTCCATTCCTTCCAAGTCCCTAAAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGCTAAGCCTTTATACAAGTTTCCATTCCTTCCAAGTCCCTAAAA  786

seq1  TGTATGTGTATTTATACAATGAGAGCTAACTGTCTGTGTAGTTTTGTCTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGTATTTATACAATGAGAGCTAACTGTCTGTGTAGTTTTGTCTT  836

seq1  TGATACTGAGTTATAACCAACTTATTCCATTGAACAAAAAAACATAGACA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTGAGTTATAACCAACTTATTCCATTGAACAAAAAAACATAGACA  886

seq1  GACTTATACAGGGACCACGTCAAGGTAGTGGAAACATTGACAGACCACCA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATACAGGGACCACGTCAAGGTAGTGGAAACATTGACAGACCACCA  936

seq1  TACCTGTGCAAATTGGTTAAAGTGGCAGACTACTTCCCATTCTCCATTCC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTGCAAATTGGTTAAAGTGGCAGACTACTTCCCATTCTCCATTCC  986

seq1  ATGCCTCTTTCATACACCGCCTCTTCCTTGGATTTCAGCCCAGTTATTAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCTTTCATACACCGCCTCTTCCTTGGATTTCAGCCCAGTTATTAG  1036

seq1  TCTCTGACATCATCTTTTTCATTCCCTTTCTTCATTGTTATTCCTTTACC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGACATCATCTTTTTCATTCCCTTTCTTCATTGTTATTCCTTTACC  1086

seq1  TGTCATATGTTCCAGAATTTGTGTTTTTAAGAGTAGAGAGTTTATTTGTC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATATGTTCCAGAATTTGTGTTTTTAAGAGTAGAGAGTTTATTTGTC  1136

seq1  TCTGTTTATTTTAGAATTC  1162
      |||||||||||||||||||
seq2  TCTGTTTATTTTAGAATTC  1155

seq1: chr15_51058847_51059378
seq2: B6Ng01-145N02.g_67_599

seq1  GAATTCACCCTTTTTGTCTACAAGAAAACAACATAAATTTAAAGACAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCTTTTTGTCTACAAGAAAACAACATAAATTTAAAGACAAGA  50

seq1  ATAAGGAAAGATGAAAGAAATTAAGTAGCTATTTTCTGATAGCATTATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGAAAGATGAAAGAAATTAAGTAGCTATTTTCTGATAGCATTATTA  100

seq1  ATTTACTTCAATTGAAAGTGCTAATGGGCTGGGTGGTGGTGGCACATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTTCAATTGAAAGTGCTAATGGGCTGGGTGGTGGTGGCACATGCC  150

seq1  TTTAGTCCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCCCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAG  200

seq1  GCCAGCCTGGTCTACAAGGTGAGTTCCAGGACAGCCAGGGCTATACAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCTGGTCTACAAGGTGAGTTCCAGGACAGCCAGGGCTATACAGAG  250

seq1  AAACCTTGTTTCAGAAAAAAAAAAAAGAAAAAAAAAAAAAGAAAGAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTGTTTCAGAAAAAAAAAAAAGAAAAAAAAAAAAAGAAAGAAAAG  300

seq1  AAAGAAAGAAGGAAGGAAGGAAGGGAGAGAGAGAGAGAAAGAGAGAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAGGAAGGAAGGAAGGGAGAGAGAGAGAGAAAGAGAGAGAGA  350

seq1  GGGAGAGAGAGAGAGAGAGAGAAAGCAAGCTATCAGAAATAAATATTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGAGAGAGAGAGAGAGAAAGCAAGCTATCAGAAATAAATATTTTC  400

seq1  TTTTTTTCTTATTTCAATTATTTTGTTGTTTTTGAGGCTAGATCTCAATA  450
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCTTATTTCAATTATTTTGTTGTTTTTGAGGCTAGATCTCAATA  450

seq1  GTAAACCTAGGTCCGCCT-TGAATTTGTGGCAGTACTCCTGTATTTCCAG  499
      ||||||||||||||||||  |||||||||||| |||||||||||||||||
seq2  GTAAACCTAGGTCCGCCTGAGAATTTGTGGCAATACTCCTGTATTTCCAG  500

seq1  TATTTTGTATTTTGCAGTACCCTCCCAAATTCT  532
       ||||||||||||||| ||||||||||||||||
seq2  AATTTTGTATTTTGCAATACCCTCCCAAATTCT  533