BAC Information

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BAC

Clone NameB6Ng01-149E05
Chromosome15 (Build37)
Map Location 9,508,258 - 9,652,464
singlet/doubletdoublet
Overlap geneC230086A09Rik
Upstream geneSlc1a3, EG622770, LOC268781, LOC382969, LOC100039619, Ranbp3l, 1110020G09Rik, Skp2, Lmbrd2, LOC666503, Ugt3a1, LOC100039661, Ugt3a2, LOC383094, Capsl, Il7r
Downstream genePrlr, Agxt2, 4930461P20Rik, Bxdc2, Rad1, 4930401A09Rik, EG666579, Rai14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149E05.bB6Ng01-149E05.g
ACCDH945651DH945652
length1,015588
definitionDH945651|Mus musculus domesticus DNA, BAC clone: B6Ng01-149E05, 5' end.DH945652|Mus musculus domesticus DNA, BAC clone: B6Ng01-149E05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,651,841 - 9,652,464)(9,508,258 - 9,508,845)
sequence
gaattccatatgaagggagacttcccccaagccaacaacacacttcagtt
ccagttcaatggttctgagtgagggaattcagagtccagggaggagtgaa
atcagaaaacaagtagtagaatggtcagatattgaaaaaattcaataaaa
tggaaaatattcatatttcccttttcctaccctctgcacaaattccagat
gccctatctcgatctgcatggcctttgtcatctttgtctctgtcttttaa
aagcagaatactccaaagtacataggtgacaaggaagatcagcaacgctg
tccttgtctcttcatcatttattgtctctcctgccacatgggagcttttg
agactcattcattcccatttgtcagttgtggctgctctttcctggactac
tgagtccttgaaagtgaattcttacctttacttttaccctggtaatttca
catttttgagtcttagattacactctttgatctatttttgatgtctgact
ctttcccgtgtgggtatttagttgagctagcagtatttgcagaagagacc
atctttcctccagcacaagctttgtgccttcatcaaaacccaagtggctg
tagctgcatgcatccatttctgaatactatattttatcctactatgctta
tttgtttatgtgccttatcatggtggatctgttaccgtacctctgacttg
taatttgagatcaggtattaaaatactgttagaatatctcctttttctca
gattgctttgggtatctcgaatcttcatgaacattgtaatctttcctagt
tctatgaagaatgccactggaactttggtggtaaccatccagaaactgta
tgttgcttttgatatgtaatgtaaccactctcatatattgattctgctga
tccacgagtatgggagtccttgtgtgggctatttcatttttttaatcctt
tctggttttgttggttgtttgttgtttgttttgatatgggtttagtgttg
tgatgttccccgaag
gaattccattctgaaaccccaagttctatccttgtaatgatagctaaggg
tattagaaattctcctttctagtcctgtaaatggagttgtcatgttaagt
aatatttgtaaaagcaattacttaactctgtcatatagtgtgtaaaccaa
aagattatttttctataaatgaataagacagtattcacactctattaaag
aaaaatataatgccaagttaataacatctacatagaaatttaaatgtaga
aattttgagcagtagattttccccctgggatttttcccatttctttatat
tttttcttactatcagagatggtaatgttaaaatactttaatttctattt
tttattattttattttattaggtactttcttcatttacatttcaaatgct
atcccaaaagtcccccatacccctccactgccctacccacccaattccac
ttcttggccctggcattcccctgtactgaggcatataaagtttgcaagac
caaggggcctctcttcccaatgatggccaactaggccatcttctgctaca
tatgcagctagagacatgagctccgggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_9651841_9652464
seq2: B6Ng01-149E05.b_47_670 (reverse)

seq1  TTCAGAAATGGATGCATGCAGCTACAGCCACTTGGGTTTTGATGAAGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAATGGATGCATGCAGCTACAGCCACTTGGGTTTTGATGAAGGCA  50

seq1  CAAAGCTTGTGCTGGAGGAAAGATGGTCTCTTCTGCAAATACTGCTAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTTGTGCTGGAGGAAAGATGGTCTCTTCTGCAAATACTGCTAGCT  100

seq1  CAACTAAATACCCACACGGGAAAGAGTCAGACATCAAAAATAGATCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAAATACCCACACGGGAAAGAGTCAGACATCAAAAATAGATCAAAG  150

seq1  AGTGTAATCTAAGACTCAAAAATGTGAAATTACCAGGGTAAAAGTAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAATCTAAGACTCAAAAATGTGAAATTACCAGGGTAAAAGTAAAGG  200

seq1  TAAGAATTCACTTTCAAGGACTCAGTAGTCCAGGAAAGAGCAGCCACAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATTCACTTTCAAGGACTCAGTAGTCCAGGAAAGAGCAGCCACAAC  250

seq1  TGACAAATGGGAATGAATGAGTCTCAAAAGCTCCCATGTGGCAGGAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAATGGGAATGAATGAGTCTCAAAAGCTCCCATGTGGCAGGAGAGA  300

seq1  CAATAAATGATGAAGAGACAAGGACAGCGTTGCTGATCTTCCTTGTCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATGATGAAGAGACAAGGACAGCGTTGCTGATCTTCCTTGTCACC  350

seq1  TATGTACTTTGGAGTATTCTGCTTTTAAAAGACAGAGACAAAGATGACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACTTTGGAGTATTCTGCTTTTAAAAGACAGAGACAAAGATGACAA  400

seq1  AGGCCATGCAGATCGAGATAGGGCATCTGGAATTTGTGCAGAGGGTAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATGCAGATCGAGATAGGGCATCTGGAATTTGTGCAGAGGGTAGGA  450

seq1  AAAGGGAAATATGAATATTTTCCATTTTATTGAATTTTTTCAATATCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAAATATGAATATTTTCCATTTTATTGAATTTTTTCAATATCTGA  500

seq1  CCATTCTACTACTTGTTTTCTGATTTCACTCCTCCCTGGACTCTGAATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTACTACTTGTTTTCTGATTTCACTCCTCCCTGGACTCTGAATTC  550

seq1  CCTCACTCAGAACCATTGAACTGGAACTGAAGTGTGTTGTTGGCTTGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTCAGAACCATTGAACTGGAACTGAAGTGTGTTGTTGGCTTGGGG  600

seq1  GAAGTCTCCCTTCATATGGAATTC  624
      ||||||||||||||||||||||||
seq2  GAAGTCTCCCTTCATATGGAATTC  624

seq1: chr15_9508258_9508845
seq2: B6Ng01-149E05.g_69_656

seq1  GAATTCCATTCTGAAACCCCAAGTTCTATCCTTGTAATGATAGCTAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCTGAAACCCCAAGTTCTATCCTTGTAATGATAGCTAAGGG  50

seq1  TATTAGAAATTCTCCTTTCTAGTCCTGTAAATGGAGTTGTCATGTTAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGAAATTCTCCTTTCTAGTCCTGTAAATGGAGTTGTCATGTTAAGT  100

seq1  AATATTTGTAAAAGCAATTACTTAACTCTGTCATATAGTGTGTAAACCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGTAAAAGCAATTACTTAACTCTGTCATATAGTGTGTAAACCAA  150

seq1  AAGATTATTTTTCTATAAATGAATAAGACAGTATTCACACTCTATTAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTATTTTTCTATAAATGAATAAGACAGTATTCACACTCTATTAAAG  200

seq1  AAAAATATAATGCCAAGTTAATAACATCTACATAGAAATTTAAATGTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATAATGCCAAGTTAATAACATCTACATAGAAATTTAAATGTAGA  250

seq1  AATTTTGAGCAGTAGATTTTCCCCCTGGGATTTTTCCCATTTCTTTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGAGCAGTAGATTTTCCCCCTGGGATTTTTCCCATTTCTTTATAT  300

seq1  TTTTTCTTACTATCAGAGATGGTAATGTTAAAATACTTTAATTTCTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTACTATCAGAGATGGTAATGTTAAAATACTTTAATTTCTATTT  350

seq1  TTTATTATTTTATTTTATTAGGTACTTTCTTCATTTACATTTCAAATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTTTATTTTATTAGGTACTTTCTTCATTTACATTTCAAATGCT  400

seq1  ATCCCAAAAGTCCCCCATACCCCTCCACTGCCCTACCCACCCAATTCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAAAGTCCCCCATACCCCTCCACTGCCCTACCCACCCAATTCCAC  450

seq1  TTCTTGGCCCTGGCATTCCCCTGTACTGAGGCATATAAAGTTTGCAAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGCCCTGGCATTCCCCTGTACTGAGGCATATAAAGTTTGCAAGAC  500

seq1  CAAGGGGCCTCTCTTCCCAATGATGGCCAACTAGGCCATCTTCTGCTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGGCCTCTCTTCCCAATGATGGCCAACTAGGCCATCTTCTGCTACA  550

seq1  TATGCAGCTAGAGACATGAGCTCCGGGGGGGGGGGGGG  588
      ||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGCTAGAGACATGAGCTCCGGGGGGGGGGGGGG  588