BAC Information

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BAC

Clone NameB6Ng01-149O18
Chromosome15 (Build37)
Map Location 49,439,943 - 49,440,859
singlet/doubletsinglet
Overlap genenone
Upstream geneCsmd3, EG665146, LOC100039600
Downstream geneLOC100039539, LOC665160
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149O18.bB6Ng01-149O18.g
ACCDH946130DH946131
length9171,220
definitionDH946130|Mus musculus domesticus DNA, BAC clone: B6Ng01-149O18, 5' end.DH946131|Mus musculus domesticus DNA, BAC clone: B6Ng01-149O18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgcctagaactacaaacctaaccagaagagtatggcttgtgag
gttaatctagggagtaacctaaaattttgttttgtcaaatgacatattgc
caaattttcttctaaatagttgtacttatatccatagattagtgttgctc
tctatgagtctttacaaagtagtcaccagaaaatagagtttcagaaatgg
tcaaaaggctggcaatacatgactcttgactgcccaagcgtaaacagaac
ttggatatcaacatcaccacccatctatcaagattcagaaaatatcatag
gaagggactcagaatggggaggactgctctgaaatgtcttctggacaccc
cgtagtcagtgaattcatgatctcacagtacctgcagttacctacgtaag
atcaggtgacattccaagtagcagcagtaactaaactcagtgggttatta
ataaaaaaagatgtttacatgaaggggagactggaataaactcggggctc
tcaggagagaatgggatgagaattttgaggttgcctagaaaaatcagaaa
agggaaatagtgggtgaatgtgaccaatataaacagttgatatgcattaa
gctgccaaagaataaataaaagttactgtaaagattttgatagggagttt
tccattagttcctatatatctgtcgttgaacatggaacttttgttctctg
aatattttcttattatttgcaactgcagggatctttgggcacattttgtg
gtccatcctttaattgttaattactctatgatacccatgtaccttctatg
tacaaagaatactagaaataaagttctacacataaagtgctttattataa
tatgatgaaatgcttctaacagttttcaactgaaaatgtaaatgtgtgtg
agtgtgtgtgtgtgtag
gaattcaagaagacaaagggaataaacaatccctgatcagcaaaatcaaa
agaggacacacactacaaccaccaccacacaaccatcactaccatcacca
ccaccaacaacaacaatggcaacagcaaaataacagaaatcagcaaacac
tagtcattgataaccctcaacatcaattttatgatatgctttccaccatt
aaaaaacatagtatcagaataaaattgaaaacaagatccattcctcttct
gaatccaagaaaaacacctttatatcataggtagaaatcagatcaatata
aaaaacatgagaaaagatattctaagcagatgggcctaagaagcaagctg
gtatacctattataatgtctgaaatagtaagcctcaaaccaaattaataa
aagagataggcaaggaaactgtatacttaccaaaggaaaaatccatcaag
agaacatcgaaattcttaaaatttatgtgctaaacccaatggcatcaagt
ttttaaagaaacattatatcctatttatggtttctattgctgcaatgaaa
caccacaagcaaaaatggagttaggggggaaagatgttttggcttatatg
tccatattgtagtacatcaccaaaggaagcaaggataggaattgaaataa
ggcaggaacctggagaaactaaggcagaggccaggaagagagatccagct
tacagaattgctttcctggctttcttggtctgttttttttttttttgttt
tgtttgttttttgttttttttttgttttgtttttgtttgttttgtttttt
gtttttttcgcagacatggatcacaaagccaagttgtggcaccacacaca
atatgttaagtccttctatatcaaacactattttaagaaaataggcttac
ctatacccccagtttttatggaggtatttttctcacctgtttcctcctgt
taggtgaccagcatacactactacagcttaaatctcataggaactttacc
ccacacatagtgcagactcaaggagaactcttgtccattccaagccatct
gcttcaccctcagaagtgtacacctggaacaactgacttagagcaatgga
tttaaacgatatttagacttccttcaaacaccagagaaaatcctattcca
tatcccagaaacttcctggaattgcccactcactctgggaaccgttgaaa
gcgcgtgggtccgacctcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_49439943_49440859
seq2: B6Ng01-149O18.b_49_965

seq1  GAATTCATGCCTAGAACTACAAACCTAACCAGAAGAGTATGGCTTGTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCCTAGAACTACAAACCTAACCAGAAGAGTATGGCTTGTGAG  50

seq1  GTTAATCTAGGGAGTAACCTAAAATTTTGTTTTGTCAAATGACATATTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATCTAGGGAGTAACCTAAAATTTTGTTTTGTCAAATGACATATTGC  100

seq1  CAAATTTTCTTCTAAATAGTTGTACTTATATCCATAGATTAGTGTTGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTTCTTCTAAATAGTTGTACTTATATCCATAGATTAGTGTTGCTC  150

seq1  TCTATGAGTCTTTACAAAGTAGTCACCAGAAAATAGAGTTTCAGAAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAGTCTTTACAAAGTAGTCACCAGAAAATAGAGTTTCAGAAATGG  200

seq1  TCAAAAGGCTGGCAATACATGACTCTTGACTGCCCAAGCGTAAACAGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGGCTGGCAATACATGACTCTTGACTGCCCAAGCGTAAACAGAAC  250

seq1  TTGGATATCAACATCACCACCCATCTATCAAGATTCAGAAAATATCATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATATCAACATCACCACCCATCTATCAAGATTCAGAAAATATCATAG  300

seq1  GAAGGGACTCAGAATGGGGAGGACTGCTCTGAAATGTCTTCTGGACACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGACTCAGAATGGGGAGGACTGCTCTGAAATGTCTTCTGGACACCC  350

seq1  CGTAGTCAGTGAATTCATGATCTCACAGTACCTGCAGTTACCTACGTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGTCAGTGAATTCATGATCTCACAGTACCTGCAGTTACCTACGTAAG  400

seq1  ATCAGGTGACATTCCAAGTAGCAGCAGTAACTAAACTCAGTGGGTTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTGACATTCCAAGTAGCAGCAGTAACTAAACTCAGTGGGTTATTA  450

seq1  ATAAAAAAAGATGTTTACATGAAGGGGAGACTGGAATAAACTCGGGGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAAGATGTTTACATGAAGGGGAGACTGGAATAAACTCGGGGCTC  500

seq1  TCAGGAGAGAATGGGATGAGAATTTTGAGGTTGCCTAGAAAAATCAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGAGAATGGGATGAGAATTTTGAGGTTGCCTAGAAAAATCAGAAA  550

seq1  AGGGAAATAGTGGGTGAATGTGACCAATATAAACAGTTGATATGCATTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAATAGTGGGTGAATGTGACCAATATAAACAGTTGATATGCATTAA  600

seq1  GCTGCCAAAGAATAAATAAAAGTTACTGTAAAGATTTTGATAGGGAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCAAAGAATAAATAAAAGTTACTGTAAAGATTTTGATAGGGAGTTT  650

seq1  TCCATTAGTTCCTATATATCTGTCGTTGAACATGGAACTTTTGTTCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTAGTTCCTATATATCTGTCGTTGAACATGGAACTTTTGTTCTCTG  700

seq1  AATATTTTCTTATTATTTGCAACTGCAGGGATCTTTGGGCACATTTTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTCTTATTATTTGCAACTGCAGGGATCTTTGGGCACATTTTGTG  750

seq1  GTCCATCCTTTAATTGTTAATTACTCTATGATACCCATGTACCTTCTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATCCTTTAATTGTTAATTACTCTATGATACCCATGTACCTTCTATG  800

seq1  TACAAAGAATACTAGAAATAAAGTTCTACACATAAGGTGCTTTATTATAA  850
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TACAAAGAATACTAGAAATAAAGTTCTACACATAAAGTGCTTTATTATAA  850

seq1  TATGATGAAATGCTTCTAACAGTTTTCAACTGAAAATGTAAATGTGTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGAAATGCTTCTAACAGTTTTCAACTGAAAATGTAAATGTGTGTG  900

seq1  AGTGTGTGTGTGTGTAG  917
      |||||||||||||||||
seq2  AGTGTGTGTGTGTGTAG  917