BAC Information

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BAC

Clone NameB6Ng01-150H15
Chromosome15 (Build37)
Map Location 84,969,218 - 85,151,484
singlet/doubletdoublet
Overlap geneRibc2, Fbln1
Upstream genePnpla3, Samm50, Parvb, Parvg, LOC382988, 1810041L15Rik, Ldoc1l, Arhgap8, 3110043J09Rik, Phf21b, LOC100043084, 4930513L16Rik, Nup50, 5031439G07Rik, LOC628135, Upk3a, 3110048E14Rik, Smc1b
Downstream geneAtxn10, EG223745, Wnt7b, LOC100042240, Ppara, 2210021J22Rik, Pkdrej, AW124722, Gtse1, Trmu, Celsr1, BC021523, Cerk, LOC100042300, Tbc1d22a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150H15.bB6Ng01-150H15.g
ACCDH946547DH946548
length172654
definitionDH946547|Mus musculus domesticus DNA, BAC clone: B6Ng01-150H15, 5' end.DH946548|Mus musculus domesticus DNA, BAC clone: B6Ng01-150H15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,151,313 - 85,151,484)(84,969,218 - 84,969,871)
sequence
caggaaagccagggcgacacagagaaattctgtctcgaaaagccaaaaac
caaaaccaacacacaccacaaacgatctgtggatgtcaggcaagtccctc
cattatcacagaacctcagcctcagacatgtcatctgcaagatggggatg
tggggtgtgtgtgtgtgtgtat
gaattcctgcccctgctgggctacacagagagtccctgtctcagagaaga
aaagaacacctcagatgagccattggttgtcagcagggcaggcacagtgg
ggactacttattctatcagaaggtaatatcaggatttagcatgcagactt
ctgagcctgcctacaaggttcaaggcaaagcccttctctgcggccttagt
caagcccatagatgcctgttttatcatgtgtagaatgagggtgaaggcaa
catccacccaaaggcgtgcactattgctctggtaaggcacaccttaggct
tcagtggctcgcaggataaaaccagtgttctcctccatcccaggctggct
cagtcggagcagctgatggagaggattcctgcagtgcagaaaggagagga
tgtggttggtcccatccgtgtcctccaagaacctgcacagccacccttgc
tcacattttatagggtagaatatgcccatggtcaggcacagtgtcacagt
cagtggtaatgactcttacacttgctattcaatttgagaacccatgtggt
gttaggacagtttggcacattgtcaggactctgaatggtagccacaagtt
taagatttatttgattatctttttaatcgtgtgtgtgtgtgtgtgtgtgt
gtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_85151313_85151484
seq2: B6Ng01-150H15.b_50_221 (reverse)

seq1  ATACACACACACACACACCCCACATCCCCATCTTGCAGATGACATGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACACACACACCCCACATCCCCATCTTGCAGATGACATGTCTG  50

seq1  AGGCTGAGGTTCTGTGATAATGGAGGGACTTGCCTGACATCCACAGATCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAGGTTCTGTGATAATGGAGGGACTTGCCTGACATCCACAGATCG  100

seq1  TTTGTGGTGTGTGTTGGTTTTGGTTTTTGGCTTTTCGAGACAGAATTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGTGTGTGTTGGTTTTGGTTTTTGGCTTTTCGAGACAGAATTTCT  150

seq1  CTGTGTCGCCCTGGCTTTCCTG  172
      ||||||||||||||||||||||
seq2  CTGTGTCGCCCTGGCTTTCCTG  172

seq1: chr15_84969218_84969871
seq2: B6Ng01-150H15.g_68_721

seq1  GAATTCCTGCCCCTGCTGGGCTACACAGAGAGTCCCTGTCTCAGAGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCCCCTGCTGGGCTACACAGAGAGTCCCTGTCTCAGAGAAGA  50

seq1  AAAGAACACCTCAGATGAGCCATTGGTTGTCAGCAGGGCAGGCACAGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACACCTCAGATGAGCCATTGGTTGTCAGCAGGGCAGGCACAGTGG  100

seq1  GGACTACTTATTCTATCAGAAGGTAATATCAGGATTTAGCATGCAGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTACTTATTCTATCAGAAGGTAATATCAGGATTTAGCATGCAGACTT  150

seq1  CTGAGCCTGCCTACAAGGTTCAAGGCAAAGCCCTTCTCTGCGGCCTTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCTGCCTACAAGGTTCAAGGCAAAGCCCTTCTCTGCGGCCTTAGT  200

seq1  CAAGCCCATAGATGCCTGTTTTATCATGTGTAGAATGAGGGTGAAGGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCATAGATGCCTGTTTTATCATGTGTAGAATGAGGGTGAAGGCAA  250

seq1  CATCCACCCAAAGGCGTGCACTATTGCTCTGGTAAGGCACACCTTAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACCCAAAGGCGTGCACTATTGCTCTGGTAAGGCACACCTTAGGCT  300

seq1  TCAGTGGCTCGCAGGATAAAACCAGTGTTCTCCTCCATCCCAGGCTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGCTCGCAGGATAAAACCAGTGTTCTCCTCCATCCCAGGCTGGCT  350

seq1  CAGTCGGAGCAGCTGATGGAGAGGATTCCTGCAGTGCAGAAAGGAGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCGGAGCAGCTGATGGAGAGGATTCCTGCAGTGCAGAAAGGAGAGGA  400

seq1  TGTGGTTGGTCCCATCCGTGTCCTCCAAGAACCTGCACAGCCACCCTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTGGTCCCATCCGTGTCCTCCAAGAACCTGCACAGCCACCCTTGC  450

seq1  TCACATTTTATAGGGTAGAATATGCCCATGGTCAGGCACAGTGTCACAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTTATAGGGTAGAATATGCCCATGGTCAGGCACAGTGTCACAGT  500

seq1  CAGTGGTAATGACTCTTACACTTGCTATTCAATTTGAGAACCCATGTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTAATGACTCTTACACTTGCTATTCAATTTGAGAACCCATGTGGT  550

seq1  GTTAGGACAGTTTGGCACATTGTCAGGACTCTGAATGGTAGCCACAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGACAGTTTGGCACATTGTCAGGACTCTGAATGGTAGCCACAAGTT  600

seq1  TAAGATTTATTTGATTATCTTTTTAATCGTGTGTGTGTGTGTGTGTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTATTTGATTATCTTTTTAATCGTGTGTGTGTGTGTGTGTGTGT  650

seq1  GTGT  654
      ||||
seq2  GTGT  654