BAC Information

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BAC

Clone NameB6Ng01-151F08
Chromosome15 (Build37)
Map Location 76,094,998 - 76,267,185
singlet/doubletdoublet
Overlap geneSpatc1, LOC100041269, Oplah, Exosc4, Gpaa1, Cyc1, Sharpin, Maf1, EG626280, Brp16, Tssk5
Upstream geneLy6f, LOC100041652, LOC100041107, 9030619P08Rik, Ly6h, Gpihbp1, Zfp41, 2810039B14Rik, Top1mt, Rhpn1, Mafa, Zc3h3, LOC672572, Gsdmdc1, Naprt1, Eef1d, Tigd5, Pycrl, Tsta3, Zfp623, Eif2s3x-ps1, Zfp707, 2410075B13Rik, Mapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139, Plec1, LOC671535, Grina
Downstream geneBop1, Scx, Hsf1, Dgat1, Scrt1, LOC666497, EG666504, Fbxl6, Gpr172b, Adck5, Cpsf1, Slc39a4, Vps28, Nfkbil2, Cyhr1, Kifc2, Foxh1, Ppp1r16a, Gpt1, Mfsd3, Recql4, Lrrc14, Lrrc24, C030006K11Rik, D15Wsu169e, Zfp251, Zfp7, Commd5, Rpl8, Zfp647, 1110038F14Rik, Mb, Apol6, Rbm9, LOC100042318, Apol3, BC020489, BC085284
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151F08.bB6Ng01-151F08.g
ACCDH947177DH947178
length1,1071,017
definitionDH947177|Mus musculus domesticus DNA, BAC clone: B6Ng01-151F08, 5' end.DH947178|Mus musculus domesticus DNA, BAC clone: B6Ng01-151F08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,094,998 - 76,096,110)(76,266,166 - 76,267,185)
sequence
gaattcctaaggagcctgcgagggatgaaaagcccaagtagatgctggga
gattcctctccatcctgctggacctccagtggcctgcagccaacaactct
gacctgtttgcatggcccaggaacccaggcaagatggatagaagacaacc
cagggacaaccactatccctgctctgcagaacttgcctcctgaagaccca
gatggatgggagaaaattctagataagtcccgccctccagacttcctatg
ctctccgtcccacaatcaaactcactaatttgggtaccaaaggacacttt
gtaaatacaacataataaaactaacgataaggaaaaaattcaatgaggag
gaaataagaacagaaagagctggagagatggctcagctcttgcagaggac
cggagttcgaatcccagcacagctgcctggagctccagctccaggggtct
gcctctgacttctgtgggcaccaacactgtctgcactcacatgacctgag
gatggacacacacacacacacacacacacacacacacacgaagaacaaat
cttatatttaaaaaaaagattagaaagaactacggtcataagtagaaaac
aaagaggggtgagtggcttaatggcctgggaaagtcagggcacccttcaa
ggacattccctctctacactgtagctccatggagaggctggaggctaaga
gacaaggacctcacgctaccctgacactgcaaaaaggaaaggtggtagag
aaggaggtcagctctacccacactccttcacacgccaaccccaaaggaaa
gccacgtgtactcccatctctacttccccctcccactcgctttgccagac
ctgagaatctggagttggttgcatcgctccacccaagcagccttccactg
tcactaaagacttccactcttccgtcgtgtctcatccgacttccaaaaag
ccttaggtaatatcgctacatcttggtcttgaaacggtccagctgatgaa
acctacttcctgactatccttccacccgtgctgtggcttctcccctctgt
tattttgcagactcgccctagtcctcgagcacaatggcctcccaatcatt
accagtt
gaattcactgagggaggggctaatttggctatccttggagccctgctggc
ctccagactagacatctatctggctgggtggttcaggctggatatggtac
ccagggcgtgtgatacacaggacaggaaagagacattttagcccagtgtt
gcacttccaaatgcagtggacaaaatgcctcagcctcctgggacccaaga
tggggcccatgctggaccatgaatgtggctctgagcagttgtcagctctg
ggtgggacactcacataaacaccagcaccatgccctccatctctagaaac
ccacgaagtcttcactaaggaagctgggggcaggcggcagacagctgtac
agccagatgcatctcaaagtattcagagccctcttgggcatcctccaaca
cttcaccattgagcataccttgatcctgcccagactgtggtaccccgaag
caggcaggtatgggagacatggcagtttggaccaaatgggtcaccaaaca
ccaattccttgaatgaaacctgctcacagctgcccctctgggcctgctga
gtgagagaggtaccaagtgcttccttggcagtcccttagccccaggcgct
gcagtccctccttctcattgctgggatcccataagtacctgggctatgct
gtggcaagtgtggaaaaggatggtgggatcagcgttcacaagccatcctg
cagggtgaggagccgctcggccacatcatcacgatggtctcgggagaagc
ctaaggaccagagtcgactgaagccttccccagtgattccagtctgaccc
cacacccaactcctgcctccacggtccccacatccccagcagggctcacc
cctcatagcccagctgcaagtagagcaggaatagacacagcccacggctt
tctggcgggtggtagtccatgtgtccgcacaccgtggagcaaagataccg
accaggagacccaagtgtggaagggtaccaatgtctgcagggagagggaa
ggggggtagggctgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_76094998_76096110
seq2: B6Ng01-151F08.b_47_1153

seq1  GAATTCCTAAGGAGCCTGCGAGGGATGAAAAGCCCAAGTAGATGCTGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAGGAGCCTGCGAGGGATGAAAAGCCCAAGTAGATGCTGGGA  50

seq1  GATTCCTCTCCATCCTGCTGGACCTCCAGTGGCCTGCAGCCAACAACTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTCTCCATCCTGCTGGACCTCCAGTGGCCTGCAGCCAACAACTCT  100

seq1  GACCTGTTTGCATGGCCCAGGAACCCAGGCAAGATGGATAGAAGACAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTTTGCATGGCCCAGGAACCCAGGCAAGATGGATAGAAGACAACC  150

seq1  CAGGGACAACCACTATCCCTGCTCTGCAGAACTTGCCTCCTGAAGACCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACAACCACTATCCCTGCTCTGCAGAACTTGCCTCCTGAAGACCCA  200

seq1  GATGGATGGGAGAAAATTCTAGATAAGTCCCGCCCTCCAGACTTCCTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATGGGAGAAAATTCTAGATAAGTCCCGCCCTCCAGACTTCCTATG  250

seq1  CTCTCCGTCCCACAATCAAACTCACTAATTTGGGTACCAAAGGACACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCGTCCCACAATCAAACTCACTAATTTGGGTACCAAAGGACACTTT  300

seq1  GTAAATACAACATAATAAAACTAACGATAAGGAAAAAATTCAATGAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATACAACATAATAAAACTAACGATAAGGAAAAAATTCAATGAGGAG  350

seq1  GAAATAAGAACAGAAAGAGCTGGAGAGATGGCTCAGCTCTTGCAGAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAGAACAGAAAGAGCTGGAGAGATGGCTCAGCTCTTGCAGAGGAC  400

seq1  CGGAGTTCGAATCCCAGCACAGCTGCCTGGAGCTCCAGCTCCAGGGGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGTTCGAATCCCAGCACAGCTGCCTGGAGCTCCAGCTCCAGGGGTCT  450

seq1  GCCTCTGACTTCTGTGGGCACCAACACTGTCTGCACTCACATGACCTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGACTTCTGTGGGCACCAACACTGTCTGCACTCACATGACCTGAG  500

seq1  GATGGACACACACACACACACACACACACACACACACACGAAGAACAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGACACACACACACACACACACACACACACACACACGAAGAACAAAT  550

seq1  CTTATATTTAAAAAAAAGATTAGAAAGAACTACGGTCATAAGTAGAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATTTAAAAAAAAGATTAGAAAGAACTACGGTCATAAGTAGAAAAC  600

seq1  AAAGAGGGGTGAGTGGCTTAATGGCCTGGGAAAGTCAGGGCACCCTTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGGGTGAGTGGCTTAATGGCCTGGGAAAGTCAGGGCACCCTTCAA  650

seq1  GGACATTCCCTCTCTACACTGTAGCTCCATGGAGAGGCTGGAGGCTAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTCCCTCTCTACACTGTAGCTCCATGGAGAGGCTGGAGGCTAAGA  700

seq1  GACAAGGACCTCAGGCTACCCTGACACTGCAAAAAGGAAAGGTGGTAGAG  750
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GACAAGGACCTCACGCTACCCTGACACTGCAAAAAGGAAAGGTGGTAGAG  750

seq1  AAGGAGGTCAGCTCTACCCACACTCCTTCACACGCCAACCCCAAAGGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGTCAGCTCTACCCACACTCCTTCACACGCCAACCCCAAAGGAAA  800

seq1  GCCACGTGTACTCCCATCTCTACTTCCCCCTCCCACTCGCTTTGCCAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACGTGTACTCCCATCTCTACTTCCCCCTCCCACTCGCTTTGCCAGAC  850

seq1  CTGAGAATCTGGAGTTGGTTGCATCGCTCCACCCAAGCAGCCTTCCACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAATCTGGAGTTGGTTGCATCGCTCCACCCAAGCAGCCTTCCACTG  900

seq1  TCACTAAAGACTTCCACTCTTCCGTCGTGTCTCATCCGACTTCCAAAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAAAGACTTCCACTCTTCCGTCGTGTCTCATCCGACTTCCAAAAAG  950

seq1  CCTTAGGTAATATCGCTACATCTTGGCCTTGAAACGGTCCAGCTGATGAA  1000
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCTTAGGTAATATCGCTACATCTTGGTCTTGAAACGGTCCAGCTGATGAA  1000

seq1  ACCTGGCCTCCCTGACTATTCCTTCCACCCGTGCCTGTGGCTTCTCCCCT  1050
      ||||   || |||||||| |||||||||||||| ||||||||||||||||
seq2  ACCT--ACTTCCTGACTA-TCCTTCCACCCGTG-CTGTGGCTTCTCCCCT  1046

seq1  CTG-TATTTTGCAGACTCGCCCTAGTTCTTCGAGGCACAATGGGCCTCCC  1099
      ||| ||||||||||||||||||||| || |||| ||||||| ||||||||
seq2  CTGTTATTTTGCAGACTCGCCCTAG-TCCTCGA-GCACAAT-GGCCTCCC  1093

seq1  ATTCATTACCAGTT  1113
      | ||||||||||||
seq2  AATCATTACCAGTT  1107

seq1: chr15_76266166_76267185
seq2: B6Ng01-151F08.g_67_1083 (reverse)

seq1  TGACAGCCCTACCCCCCCTTCCATCTCCCTGCAGACATTGGTACCCTTCC  50
      ||||||||||| |||||||||| |||||||||||||||||||||||||||
seq2  TGACAGCCCTA-CCCCCCTTCCCTCTCCCTGCAGACATTGGTACCCTTCC  49

seq1  ACAACCTGGGTCTCCTGGTCGGTCTCTTTGCTCCACGGTGTGCGGACACA  100
      || || ||||||||||||||||| ||||||||||||||||||||||||||
seq2  AC-ACTTGGGTCTCCTGGTCGGTATCTTTGCTCCACGGTGTGCGGACACA  98

seq1  TGGACTACCACCCGCCAGAAAGCCGTGGGCTGTGTCTATTCCCTGCTCTA  150
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGGACTACCACCCGCCAGAAAGCCGTGGGCTGTGTCTATT-CCTGCTCTA  147

seq1  CTTGCAGCTGGGCTATGA-GGGTGAGCCCTGCTGGGGATGTGGGGACCGT  199
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTTGCAGCTGGGCTATGAGGGGTGAGCCCTGCTGGGGATGTGGGGACCGT  197

seq1  GGAGGCAGGAGTTGGGTGTGGGGTCAGACTGGAATCACTGGGGAAGGCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGGAGTTGGGTGTGGGGTCAGACTGGAATCACTGGGGAAGGCTT  247

seq1  CAGTCGACTCTGGTCCTTAGGCTTCTCCCGAGACCATCGTGATGATGTGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCGACTCTGGTCCTTAGGCTTCTCCCGAGACCATCGTGATGATGTGG  297

seq1  CCGAGCGGCTCCTCACCCTGCAGGATGGCCTTGTGAACGCTGATCCCACC  349
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCGAGCGGCTCCTCACCCTGCAGGATGG-CTTGTGAACGCTGATCCCACC  346

seq1  ATCCTTTTCCACACTTGCCACAGCATAGCCCAGGTACTTATGGGATCCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTTCCACACTTGCCACAGCATAGCCCAGGTACTTATGGGATCCCA  396

seq1  GCAATGAGAAGGAGGGACTGCAGCGCCTGGGGCTAAGGGACTGCCAAGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGAGAAGGAGGGACTGCAGCGCCTGGGGCTAAGGGACTGCCAAGGA  446

seq1  AGCACTTGGTACCTCTCTCACTCAGCAGGCCCAGAGGGGCAGCTGTGAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTGGTACCTCTCTCACTCAGCAGGCCCAGAGGGGCAGCTGTGAGC  496

seq1  AGGTTTCATTCAAGGAATTGGTGTTTGGTGACCCATTTGGTCCAAACTGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCATTCAAGGAATTGGTGTTTGGTGACCCATTTGGTCCAAACTGC  546

seq1  CATGTCTCCCATACCTGCCTGCTTCGGGGTACCACAGTCTGGGCAGGATC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTCCCATACCTGCCTGCTTCGGGGTACCACAGTCTGGGCAGGATC  596

seq1  AAGGTATGCTCAATGGTGAAGTGTTGGAGGATGCCCAAGAGGGCTCTGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATGCTCAATGGTGAAGTGTTGGAGGATGCCCAAGAGGGCTCTGAA  646

seq1  TACTTTGAGATGCATCTGGCTGTACAGCTGTCTGCCGCCTGCCCCCAGCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGAGATGCATCTGGCTGTACAGCTGTCTGCCGCCTGCCCCCAGCT  696

seq1  TCCTTAGTGAAGACTTCGTGGGTTTCTAGAGATGGAGGGCATGGTGCTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGTGAAGACTTCGTGGGTTTCTAGAGATGGAGGGCATGGTGCTGG  746

seq1  TGTTTATGTGAGTGTCCCACCCAGAGCTGACAACTGCTCAGAGCCACATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATGTGAGTGTCCCACCCAGAGCTGACAACTGCTCAGAGCCACATT  796

seq1  CATGGTCCAGCATGGGCCCCATCTTGGGTCCCAGGAGGCTGAGGCATTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTCCAGCATGGGCCCCATCTTGGGTCCCAGGAGGCTGAGGCATTTT  846

seq1  GTCCACTGCATTTGGAAGTGCAACACTGGGCTAAAATGTCTCTTTCCTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACTGCATTTGGAAGTGCAACACTGGGCTAAAATGTCTCTTTCCTGT  896

seq1  CCTGTGTATCACACGCCCTGGGTACCATATCCAGCCTGAACCACCCAGCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTATCACACGCCCTGGGTACCATATCCAGCCTGAACCACCCAGCC  946

seq1  AGATAGATGTCTAGTCTGGAGGCCAGCAGGGCTCCAAGGATAGCCAAATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATGTCTAGTCTGGAGGCCAGCAGGGCTCCAAGGATAGCCAAATT  996

seq1  AGCCCCTCCCTCAGTGAATTC  1020
      |||||||||||||||||||||
seq2  AGCCCCTCCCTCAGTGAATTC  1017