BAC Information

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BAC

Clone NameB6Ng01-151M05
Chromosome15 (Build37)
Map Location 32,818,406 - 32,955,315
singlet/doubletdoublet
Overlap geneSdc2
Upstream geneTas2r119, 0610007N19Rik, Sema5a, LOC100040962
Downstream genePgcp, 1700084J12Rik, Tspyl5, LOC675463
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151M05.bB6Ng01-151M05.g
ACCDH947501DH947502
length1,0791,191
definitionDH947501|Mus musculus domesticus DNA, BAC clone: B6Ng01-151M05, 5' end.DH947502|Mus musculus domesticus DNA, BAC clone: B6Ng01-151M05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,818,406 - 32,819,380)(32,954,097 - 32,955,315)
sequence
gaattcttgatcttacagcacaagccattgctgttctattcaggaatttc
ccacctgtgcctatatgttcaaggttttcccccactttctcctctataag
tttcagtgtctctgttttttttttgtggagttccttgatccacttagatt
tgaccttagtacaaggagataagaatggatcatttcaaattattctacat
gataactgtcagttgtgccagcaccatttgttgaaaatgctgtctttctt
ccactggatggttttagctcccttgtcaaagatcaagtgaccataggtgt
gtgggttcattctgggtcttcaattctattccactggtctatctgtctgt
ctctataccagtgccatgcagtttttatcacaattgctctatagtacagc
tttaggtgggccatggtgattccagcagagcttcttttatcattgagaag
agtttttgctgtcctaggttttttgttcttccagatgaatttgcaaattg
ccctttctaatacattgaagatttgatttgaaattttgatggcgattgca
ttgaatctgtagattgccttcggtaagatagccatttttcactatgttga
tcctgccaatccatgagcatggaatttgctgagtttttgtctcatattat
ttgctttatcctttttaaatctaaccaaaaagtggtgacagagcagaacc
cagatgccctataattacttcaaggagaaatatggacttatgttagcaaa
tatatcacccaatgcttaatcacactaaactattttttttctaacaaagt
tttgtaaaaatatgggataacccctacttaaaatattaaaaagcagaaaa
acaaaacaatttgtccaaacgtagcacactataaaacaagaagccaatag
ctctttgatctgaatctcaaaggtcttgggcagcttcccattccctgaag
aaaaaaaaaaactataataaaaagtaaagtctagtttatactaattctta
agatatagcctctactttagatattagtcattttaacattttgtggtgtt
tgtattttttttagacaggatctcttaca
gaattcttgtcatctcattaaatagaactaaaaataaaatatttgcatta
aaatgttcagagatctttaatttcttaactcatccacgaaatgtctgtta
gcaaaggccaattcattatgttttagggccaatttctataaacttaaatc
aattttcaatccatatttgtcattagtccataaatttataccaaacaacg
gtttgtttagaataaaactattgaagattggaagccaaaactttaccaag
agagtttctgactctgcaatattgagtcttaacggtcattgagttgaaaa
cattgttataaaagatcacataaaactgtgggagagaccaagctcatctt
tccacaggctttccacaagcttcatttaattctggcatacctgcctgctc
tgacatattcagcgattctatcaccaaaagcacctgctgctttttgtctc
tcctttcctcatctgttttattaattcaacttagaaaccaatggaacagc
tcccaggaaatgctaggtatgtctgccccagtgctctcagagtatctcct
tgcctttctggttcctggctgtggaatggcactgctggcaatagtgccaa
tgctttgtaagcctagagagagtgttaatccacacagagctgagctcttg
gctactgcatgtctgcagggagctttgtcaacagggagttatgtgctatg
acttgatggactcatgagtcaggaaaatcaagaaagtggaggaacagata
ttctactaagaaaagcctgcctatgttcctgctaacacaggggtgctttt
tatcccacaaagcctgccacaaaacctgcatgctgcaagagcttggcagc
atcttatttgtaaatcaacagatgggtgaactgaaaaaacagttgcttgt
gttgttaagttttcataagcacatgccatccctaatgtgtgtaaagtcta
cactaattattacacatgctcacttggtgaactggcttgatctcatctgc
tccaccaaattcactatgcttacacagtgaaacaagaacaagagctcagg
tgctgctatgtatttcacatccaatctttctaatgatcagaatttgacta
gatcagagtcatgcttaggccttcactgaatctatatccagttctattaa
catggatcatagtggaggctagctaatgcaataatactaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_32818406_32819380
seq2: B6Ng01-151M05.b_170_1122

seq1  GGAGTTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGAAT  50

seq1  GGATCATTTCAAATTATTCTACATGATAACTGTCAGTTGTGCCAGCACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCATTTCAAATTATTCTACATGATAACTGTCAGTTGTGCCAGCACCA  100

seq1  TTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGT  150

seq1  CAAAGATCAAGTGACCATAGGTGTGTGGGTTCATTCTGGGTCTTCAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATCAAGTGACCATAGGTGTGTGGGTTCATTCTGGGTCTTCAATTC  200

seq1  TATTCCACTGGTCTATCTGTCTGTCTCTATACCAGTGCCATGCAGTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCACTGGTCTATCTGTCTGTCTCTATACCAGTGCCATGCAGTTTTT  250

seq1  ATCACAATTGCTCTATAGTACAGCTTTAGGTGGGCCATGGTGATTCCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAATTGCTCTATAGTACAGCTTTAGGTGGGCCATGGTGATTCCAGC  300

seq1  AGAGCTTCTTTTATCATTGAGAAGAGTTTTTGCTGTCCTAGGTTTTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTCTTTTATCATTGAGAAGAGTTTTTGCTGTCCTAGGTTTTTTGT  350

seq1  TCTTCCAGATGAATTTGCAAATTGCCCTTTCTAATACATTGAAGATTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAGATGAATTTGCAAATTGCCCTTTCTAATACATTGAAGATTTGA  400

seq1  TTTGAAATTTTGATGGCGATTGCATTGAATCTGTAGATTGCCTTCGGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATTTTGATGGCGATTGCATTGAATCTGTAGATTGCCTTCGGTAA  450

seq1  GATAGCCATTTTTCACTATGTTGATCCTGCCAATCCATGAGCATGGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCCATTTTTCACTATGTTGATCCTGCCAATCCATGAGCATGGAATT  500

seq1  TGCTGAGTTTTTGTCTCATATTATTTGCTTTATCCTTTTTAAATCTAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGTTTTTGTCTCATATTATTTGCTTTATCCTTTTTAAATCTAACC  550

seq1  AAAAAGTGGTGACAGAGCAGAACCCAGATGCCCTATAATTACTTCAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGGTGACAGAGCAGAACCCAGATGCCCTATAATTACTTCAAGGA  600

seq1  GAAATATGGACTTATGTTAGCAAATATATCACCCAATGCTTAATCACACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATGGACTTATGTTAGCAAATATATCACCCAATGCTTAATCACACT  650

seq1  AAACTATTTTTTTTCTAACAAAGTTTTGTAAAAATATGGGATAACCCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATTTTTTTTCTAACAAAGTTTTGTAAAAATATGGGATAACCCCTA  700

seq1  CTTAAAATATTAAAAAGCAGAAAAAACAAAACAATTTGTCCAAAACGTAG  750
      |||||||||||||||||||| |||||||||||||||||||| ||||||||
seq2  CTTAAAATATTAAAAAGCAG-AAAAACAAAACAATTTGTCC-AAACGTAG  748

seq1  CACACTATAAAACAAGAAGCCAATAGCTCTTTGATCTGAATCTCAAAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTATAAAACAAGAAGCCAATAGCTCTTTGATCTGAATCTCAAAGGT  798

seq1  CTTGGGCAGCTTCCCATTCCCTGGAAGAAAAAAAAAAAACTATAAAATAA  850
      |||||||||||||||||||||| |||| |||||||||||||||||    |
seq2  CTTGGGCAGCTTCCCATTCCCT-GAAG-AAAAAAAAAAACTATAA---TA  843

seq1  AAAAGTAAAGTCTAGTTTATTAACTAATTCTTAAAGAATATAGCCTCTAC  900
      ||||||||||||||||||||  ||||||||||||   |||||||||||||
seq2  AAAAGTAAAGTCTAGTTTAT--ACTAATTCTTAA--GATATAGCCTCTAC  889

seq1  TTTAGATATTTAGTCAATTTTAACATTTTGGTGGGTGTTTTTGTTTATTT  950
      |||||||| |||||| ||||||||||||||   ||||||    | |||||
seq2  TTTAGATA-TTAGTC-ATTTTAACATTTTG--TGGTGTT----TGTATTT  931

seq1  TTTTTTAAAGACAGGATCTCTTACA  975
      |||||   |||||||||||||||||
seq2  TTTTT---AGACAGGATCTCTTACA  953

seq1: chr15_32954097_32955315
seq2: B6Ng01-151M05.g_68_1258 (reverse)

seq1  GTTAGTATTATATTACAATTAGCTAGCCTTCCACTTATAGATACACTGTT  50
      ||||||||  |||| | ||||||||||| ||||| ||| ||| || || |
seq2  GTTAGTAT--TATTGC-ATTAGCTAGCC-TCCAC-TAT-GATCCA-TG-T  42

seq1  TAATATGGAAATTGGATATTAGAATCCAGTGAAGGCCTAAGCATTGACTC  100
      |||||    || |||||| ||| || ||||||||||||||||| ||||||
seq2  TAATA---GAACTGGATA-TAG-ATTCAGTGAAGGCCTAAGCA-TGACTC  86

seq1  CTGGATCTAGTCAAATTTCTTGGATCATTAGAAAGATTGGATGTGAATAT  150
         |||||||||||| ||||  ||||||||||||||||||||||||  | 
seq2  --TGATCTAGTCAAA-TTCT--GATCATTAGAAAGATTGGATGTGA--AA  129

seq1  TACATAGCAGGCACCTGAGCTCTTGTTCCTTGTTTCACTGTGTAAGCATT  200
      ||||||||| ||||||||||||||||| |||||||||||||||||||| |
seq2  TACATAGCA-GCACCTGAGCTCTTGTT-CTTGTTTCACTGTGTAAGCA-T  176

seq1  AGTTGAATTTGGTGGAGCAGATGAGATCAAGCCAGTTCACCAAGTGAGCA  250
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-TGAATTTGGTGGAGCAGATGAGATCAAGCCAGTTCACCAAGTGAGCA  225

seq1  TGTGTAATAATTTAGTGGTAGACTTTACACACATTAGGGATGGCATGTTG  300
      |||||||||| ||||| |||||||||||||||||||||||||||||| ||
seq2  TGTGTAATAA-TTAGT-GTAGACTTTACACACATTAGGGATGGCATG-TG  272

seq1  CTTATGAAAACTTAACAACACAAGCACCTGTTTTTTCAGTTCACCCATCT  350
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTTATGAAAACTTAACAACACAAGCAACTGTTTTTTCAGTTCACCCATCT  322

seq1  GTTGATTTACAAATAAGATGCTGCCAAGCTCTTGCAGCATGCAGGTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTTACAAATAAGATGCTGCCAAGCTCTTGCAGCATGCAGGTTTTG  372

seq1  TGGCAGGCTTTGTGGGATAAAAAGCACCCCTGTGTTAGCAGGAACATAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGCTTTGTGGGATAAAAAGCACCCCTGTGTTAGCAGGAACATAGG  422

seq1  CAGGCTTTTCTTAGTAGAATATCTGTTCCTCCACTTTCTTGATTTTCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTTTCTTAGTAGAATATCTGTTCCTCCACTTTCTTGATTTTCCTG  472

seq1  ACTCATGAGTCCATCAAGTCATAGCACATAACTCCCTGTTGACAAAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGAGTCCATCAAGTCATAGCACATAACTCCCTGTTGACAAAGCTC  522

seq1  CCTGCAGACATGCAGTAGCCAAGAGCTCAGCTCTGTGTGGATTAACACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGACATGCAGTAGCCAAGAGCTCAGCTCTGTGTGGATTAACACTC  572

seq1  TCTCTAGGCTTACAAAGCATTGGCACTATTGCCAGCAGTGCCATTCCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGGCTTACAAAGCATTGGCACTATTGCCAGCAGTGCCATTCCACA  622

seq1  GCCAGGAACCAGAAAGGCAAGGAGATACTCTGAGAGCACTGGGGCAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAACCAGAAAGGCAAGGAGATACTCTGAGAGCACTGGGGCAGACA  672

seq1  TACCTAGCATTTCCTGGGAGCTGTTCCATTGGTTTCTAAGTTGAATTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAGCATTTCCTGGGAGCTGTTCCATTGGTTTCTAAGTTGAATTAAT  722

seq1  AAAACAGATGAGGAAAGGAGAGACAAAAAGCAGCAGGTGCTTTTGGTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGATGAGGAAAGGAGAGACAAAAAGCAGCAGGTGCTTTTGGTGAT  772

seq1  AGAATCGCTGAATATGTCAGAGCAGGCAGGTATGCCAGAATTAAATGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCGCTGAATATGTCAGAGCAGGCAGGTATGCCAGAATTAAATGAAG  822

seq1  CTTGTGGAAAGCCTGTGGAAAGATGAGCTTGGTCTCTCCCACAGTTTTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGAAAGCCTGTGGAAAGATGAGCTTGGTCTCTCCCACAGTTTTAT  872

seq1  GTGATCTTTTATAACAATGTTTTCAACTCAATGACCGTTAAGACTCAATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTTTTATAACAATGTTTTCAACTCAATGACCGTTAAGACTCAATA  922

seq1  TTGCAGAGTCAGAAACTCTCTTGGTAAAGTTTTGGCTTCCAATCTTCAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAGTCAGAAACTCTCTTGGTAAAGTTTTGGCTTCCAATCTTCAAT  972

seq1  AGTTTTATTCTAAACAAACCGTTGTTTGGTATAAATTTATGGACTAATGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTATTCTAAACAAACCGTTGTTTGGTATAAATTTATGGACTAATGA  1022

seq1  CAAATATGGATTGAAAATTGATTTAAGTTTATAGAAATTGGCCCTAAAAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATGGATTGAAAATTGATTTAAGTTTATAGAAATTGGCCCTAAAAC  1072

seq1  ATAATGAATTGGCCTTTGCTAACAGACATTTCGTGGATGAGTTAAGAAAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAATTGGCCTTTGCTAACAGACATTTCGTGGATGAGTTAAGAAAT  1122

seq1  TAAAGATCTCTGAACATTTTAATGCAAATATTTTATTTTTAGTTCTATTT  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATCTCTGAACATTTTAATGCAAATATTTTATTTTTAGTTCTATTT  1172

seq1  AATGAGATGACAAGAATTC  1219
      |||||||||||||||||||
seq2  AATGAGATGACAAGAATTC  1191