BAC Information

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BAC

Clone NameB6Ng01-152O21
Chromosome15 (Build37)
Map Location 43,818,865 - 43,967,372
singlet/doubletdoublet
Overlap geneLOC100039309
Upstream geneRspo2, LOC675960, Eif3s6, Ttc35, LOC100039288, Tmem74
Downstream geneTrhr, LOC665041, Nudcd1, Eny2, Pkhd1l1, Ebag9, 5730410E15Rik, A930017M01Rik, EG432950, Kcnv1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152O21.bB6Ng01-152O21.g
ACCDH948381DH948382
length1,1311,092
definitionDH948381|Mus musculus domesticus DNA, BAC clone: B6Ng01-152O21, 5' end.DH948382|Mus musculus domesticus DNA, BAC clone: B6Ng01-152O21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,966,236 - 43,967,372)(43,818,865 - 43,819,963)
sequence
gaattcaaatggatttaagcaatgaaaaaaatcaaaataaccctttaatt
ttataaaagttttggctaaaagtagacaagggaccaggcaatgatagaca
gaccaagaggtgacgtagggccagatctaagccactgctgctactatgag
ctgaggtaactagagtgagttcaacttctagaatatgaaaaagcagacac
tcaggtttgggaaaatgccaaaatgatgggctctgtgttaaaggcagaga
accttggaggtctgcatagaaacaagactagacaaatgaggagggcacaa
gcaactcctagagcttgcattcagccttcttgccctttgcctgtgtgact
ggaacagatacatcatgcttgcctttcctcctgtagtgctcacaggtccc
aggacccacagcatgccctttgctctgcatctgcagtggattgattctgt
atttctcatagccctgccaccacccagccattcctggaatggactttctt
ccttctcaatatgttttattactgtgaggtacacctttcaggtgttttgt
aattaaaacaacaacaaaccaaatcaatcaaacaaaaagaaacctcacga
tgatagtaaagaatttgcatagaaatttatccttcttagtagtgttaata
tctaacatgaacatggtacatttgctacaattaacaagacaatactgggt
atttacatgatttatttggaatttatattcatgaattctttgtctcatta
ctttctatttattcaatcattttcaacagcataggctgatttttatgttt
agcatagggatctaatatgattttattattgtacaaatcattgctatgtt
tcataataaatataaaaattgtgtaatattactctacacgttttactgaa
cagaatccacagaggttgagtcttcttccagtttccatttgagagtcaga
atggggattttgatattgagacatagtggggacttcttcatccatgtccc
actcaaaacttggtacttgggaactcggatatatattattgaattccagg
catcactgattatagaaaatcagtaaagatctgggaatattattgctaga
gagaatgctgtttttcataaattccactgta
gaattcctccctggctacaggagggggcaacttcagtcatcataccctat
gctgttaggtgtctcagctagggttacccccatagactctctgaagcctc
ctcaacaatttattttttaattaaaagaaaaagctataaaggaaactact
catgctatctactattttataaatcttattctttataacatataaaatcc
acttcattatatcttagttttatttattttttactttgtcctgtataaaa
aagaatcttaaaatactgaagctagtcctctcctttatgtcttttaaaaa
acactttctattctctttggctgtactttattttaaacctgaaattttta
ttcatttatgctacttacagttactcacatctttcttgagttatttatct
ttgcttttctgcattcagccatttcaaagtgagttatttttgctggtaca
tgtcctttagtggttcattcagtaaatgtgcatgaatagtaaaacctctc
aatcataatgtatttaaaaacaactttcttttacactcattttgaataat
gaggttaaagcacataaactgctctataaagtgatttgactccaagtttt
aaaatagcccatttgctataagacataatgaaaaattaaattgcctttag
actttaatacaaattagcagtaaataaaaggcatatatcaatgccatgat
gcttaattcaagataagtataaaggctagagaaggccctacatttggttg
tgttatgcataaattaccaaataaaaatgaaatgcagtgatcatgccttg
ctgcattatattcttgtagctaaagattaacatatggtcatgaaaaatga
aaacattataccatgttatattaccaacaagactttaatctatgcctaga
ttttccagtggttaccgatatacctgatatattgtttttctcacttaaac
atatatcctgtcacacataacagtaagcttaaattattgcataatattta
ctactcataattcctcaggaacaatatattaaaaaaaaaactattctttg
tgtacatggcaatgatcaaattgctgttaaacatggctggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_43966236_43967372
seq2: B6Ng01-152O21.b_48_1178 (reverse)

seq1  TACAGTGGGAGTTTACTGAAAAACAGCAATTTCTACTCTAGCAATAATAA  50
      |||||| ||| |||| ||||||||||||  |||| ||||||||||||| |
seq2  TACAGT-GGAATTTA-TGAAAAACAGCA--TTCT-CTCTAGCAATAAT-A  44

seq1  TTCCCAGACTCTTTACTGATTATCTTATAATCAGTGATGCCTGGGATTCA  100
      |||||||| |||||||||||| || ||||||||||||||||||| |||||
seq2  TTCCCAGA-TCTTTACTGATTTTC-TATAATCAGTGATGCCTGGAATTCA  92

seq1  TTAATAATATATACGAGTT-CCAAGTACCAGGTTTTGAGTGGG-CATGGA  148
       |||| |||||| |||||| |||||||||| |||||||||||| ||||||
seq2  ATAAT-ATATATCCGAGTTCCCAAGTACCAAGTTTTGAGTGGGACATGGA  141

seq1  TGGAGAAGT-CACACTATGTCTCAATATCAAAATCCCCATTCTGACTCTC  197
      || |||||| | ||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGTCCCCACTATGTCTCAATATCAAAATCCCCATTCTGACTCTC  191

seq1  AAATGGAAACTGGAAGAAGACTCAACCTCTGTGGATTCTGTTCAGTAAAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAAACTGGAAGAAGACTCAACCTCTGTGGATTCTGTTCAGTAAAA  241

seq1  CGTGTAGAGTAATATTACACAATTTTTATATTTATTATGAAACATAGCAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTAGAGTAATATTACACAATTTTTATATTTATTATGAAACATAGCAA  291

seq1  TGATTTGTACAATAATAAAATCATATTAGATCCCTATGCTAAACATAAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGTACAATAATAAAATCATATTAGATCCCTATGCTAAACATAAAA  341

seq1  ATCAGCCTATGCTGTTGAAAATGATTGAATAAATAGAAAGTAATGAGACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCCTATGCTGTTGAAAATGATTGAATAAATAGAAAGTAATGAGACA  391

seq1  AAGAATTCATGAATATAAATTCCAAATAAATCATGTAAATACCCAGTATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTCATGAATATAAATTCCAAATAAATCATGTAAATACCCAGTATT  441

seq1  GTCTTGTTAATTGTAGCAAATGTACCATGTTCATGTTAGATATTAACACT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTTAATTGTAGCAAATGTACCATGTTCATGTTAGATATTAACACT  491

seq1  ACTAAGAAGGATAAATTTCTATGCAAATTCTTTACTATCATCGTGAGGTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGAAGGATAAATTTCTATGCAAATTCTTTACTATCATCGTGAGGTT  541

seq1  TCTTTTTGTTTGATTGATTTGGTTTGTTGTTGTTTTAATTACAAAACACC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTGTTTGATTGATTTGGTTTGTTGTTGTTTTAATTACAAAACACC  591

seq1  TGAAAGGTGTACCTCACAGTAATAAAACATATTGAGAAGGAAGAAAGTCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGTGTACCTCACAGTAATAAAACATATTGAGAAGGAAGAAAGTCC  641

seq1  ATTCCAGGAATGGCTGGGTGGTGGCAGGGCTATGAGAAATACAGAATCAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGGAATGGCTGGGTGGTGGCAGGGCTATGAGAAATACAGAATCAA  691

seq1  TCCACTGCAGATGCAGAGCAAAGGGCATGCTGTGGGTCCTGGGACCTGTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGCAGATGCAGAGCAAAGGGCATGCTGTGGGTCCTGGGACCTGTG  741

seq1  AGCACTACAGGAGGAAAGGCAAGCATGATGTATCTGTTCCAGTCACACAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTACAGGAGGAAAGGCAAGCATGATGTATCTGTTCCAGTCACACAG  791

seq1  GCAAAGGGCAAGAAGGCTGAATGCAAGCTCTAGGAGTTGCTTGTGCCCTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGGCAAGAAGGCTGAATGCAAGCTCTAGGAGTTGCTTGTGCCCTC  841

seq1  CTCATTTGTCTAGTCTTGTTTCTATGCAGACCTCCAAGGTTCTCTGCCTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTGTCTAGTCTTGTTTCTATGCAGACCTCCAAGGTTCTCTGCCTT  891

seq1  TAACACAGAGCCCATCATTTTGGCATTTTCCCAAACCTGAGTGTCTGCTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAGAGCCCATCATTTTGGCATTTTCCCAAACCTGAGTGTCTGCTT  941

seq1  TTTCATATTCTAGAAGTTGAACTCACTCTAGTTACCTCAGCTCATAGTAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATATTCTAGAAGTTGAACTCACTCTAGTTACCTCAGCTCATAGTAG  991

seq1  CAGCAGTGGCTTAGATCTGGCCCTACGTCACCTCTTGGTCTGTCTATCAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTGGCTTAGATCTGGCCCTACGTCACCTCTTGGTCTGTCTATCAT  1041

seq1  TGCCTGGTCCCTTGTCTACTTTTAGCCAAAACTTTTATAAAATTAAAGGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGTCCCTTGTCTACTTTTAGCCAAAACTTTTATAAAATTAAAGGG  1091

seq1  TTATTTTGATTTTTTTCATTGCTTAAATCCATTTGAATTC  1137
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGATTTTTTTCATTGCTTAAATCCATTTGAATTC  1131

seq1: chr15_43818865_43819963
seq2: B6Ng01-152O21.g_68_1159

seq1  GAATTCCTCCCTGGCTACAGGAGGGGGCAACTTCAGTCATCATACCCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCCTGGCTACAGGAGGGGGCAACTTCAGTCATCATACCCTAT  50

seq1  GCTGTTAGGTGTCTCAGCTAGGGTTACCCCCATAGACTCTCTGAAGCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTAGGTGTCTCAGCTAGGGTTACCCCCATAGACTCTCTGAAGCCTC  100

seq1  CTCAACAATTTATTTTTTAATTAAAAGAAAAAGCTATAAAGGAAACTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACAATTTATTTTTTAATTAAAAGAAAAAGCTATAAAGGAAACTACT  150

seq1  CATGCTATCTACTATTTTATAAATCTTATTCTTTATAACATATAAAATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTATCTACTATTTTATAAATCTTATTCTTTATAACATATAAAATCC  200

seq1  ACTTCATTATATCTTAGTTTTATTTATTTTTTACTTTGTCCTGTATAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATTATATCTTAGTTTTATTTATTTTTTACTTTGTCCTGTATAAAA  250

seq1  AAGAATCTTAAAATACTGAAGCTAGTCCTCTCCTTTATGTCTTTTAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCTTAAAATACTGAAGCTAGTCCTCTCCTTTATGTCTTTTAAAAA  300

seq1  ACACTTTCTATTCTCTTTGGCTGTACTTTATTTTAAACCTGAAATTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTCTATTCTCTTTGGCTGTACTTTATTTTAAACCTGAAATTTTTA  350

seq1  TTCATTTATGCTACTTACAGTTACTCACATCTTTCTTGAGTTATTTATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTATGCTACTTACAGTTACTCACATCTTTCTTGAGTTATTTATCT  400

seq1  TTGCTTTTCTGCATTCAGCCATTTCAAAGTGAGTTATTTTTGCTGGTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTCTGCATTCAGCCATTTCAAAGTGAGTTATTTTTGCTGGTACA  450

seq1  TGTCCTTTAGTGGTTCATTCAGTAAATGTGCATGAATAGTAAAACCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTTAGTGGTTCATTCAGTAAATGTGCATGAATAGTAAAACCTCTC  500

seq1  AATCATAATGTATTTAAAAACAACTTTCTTTTACACTCATTTTGAATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATAATGTATTTAAAAACAACTTTCTTTTACACTCATTTTGAATAAT  550

seq1  GAGGTTAAAGCACATAAACTGCTCTATAAAGTGATTTGACTCCAAGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTAAAGCACATAAACTGCTCTATAAAGTGATTTGACTCCAAGTTTT  600

seq1  AAAATAGCCCATTTGCTATAAGACATAATGAAAAATTAAATTGCCTTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGCCCATTTGCTATAAGACATAATGAAAAATTAAATTGCCTTTAG  650

seq1  ACTTTAATACAAATTAGCAGTAAATAAAAGGCATATATCAATGCCATGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAATACAAATTAGCAGTAAATAAAAGGCATATATCAATGCCATGAT  700

seq1  GCTTAATTCAAGATAAGTATAAAGGCTAGAGAAGGCCCTACATTTGGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATTCAAGATAAGTATAAAGGCTAGAGAAGGCCCTACATTTGGTTG  750

seq1  TGTTATGCATAAATTACCAAATAAAAATGAAATGCAGTGATCATGCCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGCATAAATTACCAAATAAAAATGAAATGCAGTGATCATGCCTTG  800

seq1  CTGCATTATATTCTTGTAGCTAAAGATTAACATATGGTCATGAAAAATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTATATTCTTGTAGCTAAAGATTAACATATGGTCATGAAAAATGA  850

seq1  AAACATTATACCATGTTATATTACCAACAAGACTTTAATCTATGCCTAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTATACCATGTTATATTACCAACAAGACTTTAATCTATGCCTAGA  900

seq1  TTTTCCAGTGGTTACCGATATACCTGATATATTGTTTTTCTCACTTAAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAGTGGTTACCGATATACCTGATATATTGTTTTTCTCACTTAAAC  950

seq1  ATATATCCTGTCAACACATAAACAGTAAGCTTAAATTATTGCATAATATT  1000
      |||||||||||| |||||| ||||||||||||||||||||||||||||||
seq2  ATATATCCTGTC-ACACAT-AACAGTAAGCTTAAATTATTGCATAATATT  998

seq1  TACTACTCATAATTCCTCAAGGAACAATATATTAAAAAAAAAAACTATAC  1050
      |||||||||||||||||| |||||||||||||| |||||||||||||| |
seq2  TACTACTCATAATTCCTC-AGGAACAATATATT-AAAAAAAAAACTATTC  1046

seq1  TTTGTGTACAATGGCAGTGATCAGATTTGCTGTTAAAACATTGCTGGAG  1099
      ||||||||| |||||| |||||| | |||||||| |||||| |||||||
seq2  TTTGTGTAC-ATGGCAATGATCA-AATTGCTGTT-AAACATGGCTGGAG  1092