BAC Information

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BAC

Clone NameB6Ng01-156H18
Chromosome15 (Build37)
Map Location 55,064,931 - 55,065,308
singlet/doubletsinglet
Overlap geneDepdc6
Upstream geneTnfrsf11b, LOC665280, EG383032, Colec10, Mal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik
Downstream geneCol14a1, Mrpl13, Mtbp, Sntb1, LOC665348, LOC100039908, Hba-ps3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156H18.bB6Ng01-156H18.g
ACCDH950978DH950979
length1,156755
definitionDH950978|Mus musculus domesticus DNA, BAC clone: B6Ng01-156H18, 5' end.DH950979|Mus musculus domesticus DNA, BAC clone: B6Ng01-156H18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattctctgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atgagagctagagaagtagccaaggagctaaagggatctgcaacctatag
gtggacaacattatgagctaccagtacccgagctctgactctagctgcaa
tatatcaaagatgctagtcggcatcactgaagaagtcattgactgcactt
tattgccagtacaggaattcaaggctaaaaggggaattggttggcagggg
attggg
gaattcactcgaacaaccggatccttctacggcaaagcttttattgcttc
aacataaggaagaccccgaacccggaaaatggcgctgcttatatagcccg
cagcgtgacgtttcagcacctgatgtggcatgacagcacctgatttgttg
ctcgcccatcaccccattactacgctccgagatgggcagtgactgggcgt
gaattcactcttgcacttgtgcataaggcttgtttactaggttaggcgca
gtggaagccagcgccatcttataatggcgattgctcacagcacggctctc
cacagctggatcttgaggtagattccttcatgaggaaccaccatactgat
taccataatagctatgtggtaacacatccatttgcatattttctttagat
gtgtacccaattgtttaattgggttatctgttttcttgatatctactttc
ttttttttttttttttgtattttggataaacactgtgaaggcttgaataa
aaatgtcctcataggctcatatatttgagtgtttggcacccagttagtga
actatttatgaaggattagaatgtgtggctttgtggcattattggaatgg
gtgtggccttgttggaggtatgtcactgggggtgagctttgaggtttatg
cctctatcataaagtgtctatattttttctctgataggttcagagtatca
actttacaaaaggtcttgtatctattttgattttttttgtttgtttgtct
gtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_55064931_55065308
seq2: B6Ng01-156H18.g_666_821 (reverse)

seq1  AAAACAAAACAAACAAACAAAAAAAACTGTGGTCTTGGCCTTTCCTATTC  50
                                                        
seq2  --------------------------------------------------  0

seq1  TCCTGTGTGTCTTGTTTAGGGTTTTATTGCCGTGGAGAGACACTGACCAA  100
                                                        
seq2  --------------------------------------------------  0

seq1  GGCAACCCATAAAAAGGAAAACATTTAATTGAGGCTGGTTTACAGTTTCA  150
                                                        
seq2  --------------------------------------------------  0

seq1  GGGGTTCAGTCGATTGTTGTCATAGCAGGAAGCATGGCAGCATGCAGACA  200
                                               |  ||||||
seq2  ----------------------------------------AAAACAGACA  10

seq1  GACATACTGCTGGAGAAGGATTTGAGA---GTTCTATATCTTTATCTGAA  247
       ||| ||      | ||  | |  | |    | | | | |||| | | ||
seq2  AACAAAC------AAAAAAAATCAAAATAGATACAAGACCTTT-TGTAAA  53

seq1  ---GACAGCCAGAAAGAGACTGTCTTCCACAGGCAACAGGAGGAGACTCT  294
         || |  | |||         ||  || ||  || |    || ||| |
seq2  GTTGATACTCTGAA--------CCTATCAGAGAAAAAATATAGACACT-T  94

seq1  GATTCCACACTGGGCAGAGTTTAGGCATAGGAAACCTCAAAGCCCACCCC  344
       ||             || |  ||||||   |||||||||||| ||||||
seq2  TAT-------------GA-TAGAGGCAT---AAACCTCAAAGCTCACCCC  127

seq1  TATGGTGACACCTTTCCTCCAACAAGGCCACACC  378
       |  ||||||   | |||||||||||||||||||
seq2  CA--GTGACA---TACCTCCAACAAGGCCACACC  156