BAC Information

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BAC

Clone NameB6Ng01-158C10
Chromosome15 (Build37)
Map Location 41,144,885 - 41,269,115
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC670013, LOC664872, Zfpm2, Ppia-ps25
Downstream geneOxr1, Abra, EG432946, LOC432947, LOC100039268, LOC100039197, Angpt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158C10.bB6Ng01-158C10.g
ACCDH952183DH952184
length6401,111
definitionDH952183|Mus musculus domesticus DNA, BAC clone: B6Ng01-158C10, 5' end.DH952184|Mus musculus domesticus DNA, BAC clone: B6Ng01-158C10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,144,885 - 41,145,524)(41,267,985 - 41,269,115)
sequence
gaattcactgttgtggccattagcatcatgaccctgtgtgagagaaagaa
aaagatatgctttttaaaagtatccacttacgagaacctcaatagagaac
tagagaacacagctgaagggaaagttcactaaactaggccctttgccaat
tacgaaactcttacaattgctaaggaaacattatgatgtaaagggaaatt
tataaagtaaaaatatctataaatatatcattttaattgaatgttttagc
ttctttgccaagctctacgtgggtctctttgactttctcacataccgtag
aatcctgtacgtttaagaattcaaagactatcagttatatcatgctacct
tgtatatttgagtgttttaaaaatatcaaaggggagatactttaccattg
taaagcataccttagaattcaaaggctatcagttatatcatgctatcctg
tatatttacgtgttttaaaaatatcaaagggaagatactttatttaccat
tgtatcttatgaagaatatctcccttatagagagatcagtctgaagtagc
tacaaccatttttttaagttacttaaggttcagaatatcattataattat
ttcagggttctaccaaagggtggaggtggggtggggtgga
gaattcttttcatatccttcagttgcaatgtatcttgtgctttggtggaa
agtggagacttgacaaagttatcccacccaaggctaagcacaaaatctgt
tctcagcattttttagctcccattcgtctctgaattgactggtgcccacc
gccaaaagaagtatctacgacccaggccgaatgcaacccaggaccacagt
ctcatccagtctgctttggctgatcttaatgataattttccaatttctaa
ttctatatttctactgaagaaggtttatagggattattattattattatt
tattatttgagataggcaatggaagataaggagagacagtaaacaagggt
gacccaaggactcatgaatctcttctgtctcctggctcatctcaacagtc
atctccatcatcttcatcatcttcaccacccgaaaagccatggcttcact
tcacattcctggttggatgttcctcgttttagctaaatctttcacaaaac
cagaaatatttatctttgcacttttctttttttttcaaatatcgattttg
tcctttatgacgtatagacagccaaggaacttttggtacagaagagagct
ttcagctaggtgatagagttgaaaggaagttgccacccagccggggagat
aagtcatccatatggacagatacgtgcaaagccagacagggaattgtgta
aatgtcagggatgaagtggcgacggctctgactttattgtcatttcttta
aatggtttcttcattttctgacttccttttcttctatttatgctctctcc
ctccatacgtcctaaatcagtctcctcagctcattcctccaagtggaagg
agacagatttctcccttcctacacagttcactcagtcagtatgttagaag
atttttttttgtgtttgtttttctcacaaacaaattagaaatttgaatgt
cagtagacagatgtgctaaaagttcttgtcaggtaaagggatgactcata
tctatatatacagaaaacttactaatcacttctatgtgttttggagagta
gaacctcacaagtatgcatttgaggcatgcgcaaaaattttgcctaataa
tgtttcagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_41144885_41145524
seq2: B6Ng01-158C10.b_46_685

seq1  GAATTCACTGTTGTGGCCATTAGCATCATGACCCTGTGTGAGAGAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTTGTGGCCATTAGCATCATGACCCTGTGTGAGAGAAAGAA  50

seq1  AAAGATATGCTTTTTAAAAGTATCCACTTACGAGAACCTCAATAGAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATATGCTTTTTAAAAGTATCCACTTACGAGAACCTCAATAGAGAAC  100

seq1  TAGAGAACACAGCTGAAGGGAAAGTTCACTAAACTAGGCCCTTTGCCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAACACAGCTGAAGGGAAAGTTCACTAAACTAGGCCCTTTGCCAAT  150

seq1  TACGAAACTCTTACAATTGCTAAGGAAACATTATGATGTAAAGGGAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGAAACTCTTACAATTGCTAAGGAAACATTATGATGTAAAGGGAAATT  200

seq1  TATAAAGTAAAAATATCTATAAATATATCATTTTAATTGAATGTTTTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGTAAAAATATCTATAAATATATCATTTTAATTGAATGTTTTAGC  250

seq1  TTCTTTGCCAAGCTCTACGTGGGTCTCTTTGACTTTCTCACATACCGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGCCAAGCTCTACGTGGGTCTCTTTGACTTTCTCACATACCGTAG  300

seq1  AATCCTGTACGTTTAAGAATTCAAAGACTATCAGTTATATCATGCTACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGTACGTTTAAGAATTCAAAGACTATCAGTTATATCATGCTACCT  350

seq1  TGTATATTTGAGTGTTTTAAAAATATCAAAGGGGAGATACTTTACCATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTTGAGTGTTTTAAAAATATCAAAGGGGAGATACTTTACCATTG  400

seq1  TAAAGCATACCTTAGAATTCAAAGGCTATCAGTTATATCATGCTATCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCATACCTTAGAATTCAAAGGCTATCAGTTATATCATGCTATCCTG  450

seq1  TATATTTACGTGTTTTAAAAATATCAAAGGGAAGATACTTTATTTACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTACGTGTTTTAAAAATATCAAAGGGAAGATACTTTATTTACCAT  500

seq1  TGTATCTTATGAAGAATATCTCCCTTATAGAGAGATCAGTCTGAAGTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTTATGAAGAATATCTCCCTTATAGAGAGATCAGTCTGAAGTAGC  550

seq1  TACAACCATTTTTTTAAGTTACTTAAGGTTCAGAATATCATTATAATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCATTTTTTTAAGTTACTTAAGGTTCAGAATATCATTATAATTAT  600

seq1  TTCAGGGTTCTACCAAAGGGTGGAGGTGGGGTGGGGTGGA  640
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGTTCTACCAAAGGGTGGAGGTGGGGTGGGGTGGA  640

seq1: chr15_41267985_41269115
seq2: B6Ng01-158C10.g_68_1178 (reverse)

seq1  TTTCTTGAGAAACATTTAATAGGCAAAATATTTTGCCGCAATGCCTCAAA  50
      |||||   |||||| ||| |||||||||| ||||| ||| ||||||||||
seq2  TTTCT---GAAACA-TTATTAGGCAAAAT-TTTTG-CGC-ATGCCTCAAA  43

seq1  TGCATAACTTGTGAGGTTTCTACTCTCCAAAACACAATAGAAGTGAATTT  100
      ||||| |||||||||| |||||||||||||||||| ||||||||||  ||
seq2  TGCAT-ACTTGTGAGG-TTCTACTCTCCAAAACAC-ATAGAAGTGA--TT  88

seq1  AGTTAAGTTTTCTGTATATATAGATATTGAGTCATCCCTTTACCTGACAA  150
      || ||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AG-TAAGTTTTCTGTATATATAGATA-TGAGTCATCCCTTTACCTGACAA  136

seq1  GAACTTTTTAGCACATCTGTCTACCTGACATTTCAAATTTCTAATTTGTT  200
      |||| |||||||||||||||||| |||||| ||||||||||||||||| |
seq2  GAAC-TTTTAGCACATCTGTCTA-CTGACA-TTCAAATTTCTAATTTG-T  182

seq1  TTGTGAGAAAAACAAAACAACAAAAAAAAATCTTCTAACATACTGACTGA  250
      ||||||||||||||||   |||||||||||||||||||||||||||||||
seq2  TTGTGAGAAAAACAAA--CACAAAAAAAAATCTTCTAACATACTGACTGA  230

seq1  GTGAACTGTGTAGGAAGGGAGAAATCTGTCTCCTTCCACTTGGAGGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACTGTGTAGGAAGGGAGAAATCTGTCTCCTTCCACTTGGAGGAATG  280

seq1  AGCTGAGGAGACTGATTTAGGACGTATGGAGGGAGAGAGCATAAATAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGGAGACTGATTTAGGACGTATGGAGGGAGAGAGCATAAATAGAA  330

seq1  GAAAAGGAAGTCAGAAAATGAAGAAACCATTTAAAGAAATGACAATAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGAAGTCAGAAAATGAAGAAACCATTTAAAGAAATGACAATAAAG  380

seq1  TCAGAGCCGTCGCCACTTCATCCCTGACATTTACACAATTCCCTGTCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCCGTCGCCACTTCATCCCTGACATTTACACAATTCCCTGTCTGG  430

seq1  CTTTGCACGTATCTGTCCATATGGATGACTTATCTCCCCGGCTGGGTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCACGTATCTGTCCATATGGATGACTTATCTCCCCGGCTGGGTGGC  480

seq1  AACTTCCTTTCAACTCTATCACCTAGCTGAAAGCTCTCTTCTGTACCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCTTTCAACTCTATCACCTAGCTGAAAGCTCTCTTCTGTACCAAA  530

seq1  AGTTCCTTGGCTGTCTATACGTCATAAAGGACAAAATCGATATTTGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTTGGCTGTCTATACGTCATAAAGGACAAAATCGATATTTGAAAA  580

seq1  AAAAAGAAAAGTGCAAAGATAAATATTTCTGGTTTTGTGAAAGATTTAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAAGTGCAAAGATAAATATTTCTGGTTTTGTGAAAGATTTAGC  630

seq1  TAAAACGAGGAACATCCAACCAGGAATGTGAAGTGAAGCCATGGCTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACGAGGAACATCCAACCAGGAATGTGAAGTGAAGCCATGGCTTTTC  680

seq1  GGGTGGTGAAGATGATGAAGATGATGGAGATGACTGTTGAGATGAGCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTGAAGATGATGAAGATGATGGAGATGACTGTTGAGATGAGCCAG  730

seq1  GAGACAGAAGAGATTCATGAGTCCTTGGGTCACCCTTGTTTACTGTCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAAGAGATTCATGAGTCCTTGGGTCACCCTTGTTTACTGTCTCT  780

seq1  CCTTATCTTCCATTGCCTATCTCAAATAATAAATAATAATAATAATAATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATCTTCCATTGCCTATCTCAAATAATAAATAATAATAATAATAATC  830

seq1  CCTATAAACCTTCTTCAGTAGAAATATAGAATTAGAAATTGGAAAATTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAAACCTTCTTCAGTAGAAATATAGAATTAGAAATTGGAAAATTAT  880

seq1  CATTAAGATCAGCCAAAGCAGACTGGATGAGACTGTGGTCCTGGGTTGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGATCAGCCAAAGCAGACTGGATGAGACTGTGGTCCTGGGTTGCA  930

seq1  TTCGGCCTGGGTCGTAGATACTTCTTTTGGCGGTGGGCACCAGTCAATTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGCCTGGGTCGTAGATACTTCTTTTGGCGGTGGGCACCAGTCAATTC  980

seq1  AGAGACGAATGGGAGCTAAAAAATGCTGAGAACAGATTTTGTGCTTAGCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACGAATGGGAGCTAAAAAATGCTGAGAACAGATTTTGTGCTTAGCC  1030

seq1  TTGGGTGGGATAACTTTGTCAAGTCTCCACTTTCCACCAAAGCACAAGAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGGGATAACTTTGTCAAGTCTCCACTTTCCACCAAAGCACAAGAT  1080

seq1  ACATTGCAACTGAAGGATATGAAAAGAATTC  1131
      |||||||||||||||||||||||||||||||
seq2  ACATTGCAACTGAAGGATATGAAAAGAATTC  1111