BAC Information

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BAC

Clone NameB6Ng01-158I02
Chromosome15 (Build37)
Map Location 57,163,545 - 57,342,146
singlet/doubletdoublet
Overlap geneBC026439
Upstream geneHas2, EG594843, LOC435442, LOC100040067, LOC100039984
Downstream geneZhx2, Derl1, Wdr67, BC030396, 9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32, 8230402K04Rik, Anxa13, LOC100040231, D15Ertd621e, EG631797
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158I02.bB6Ng01-158I02.g
ACCDH952437DH952438
length1,0901,049
definitionDH952437|Mus musculus domesticus DNA, BAC clone: B6Ng01-158I02, 5' end.DH952438|Mus musculus domesticus DNA, BAC clone: B6Ng01-158I02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,163,545 - 57,164,651)(57,341,083 - 57,342,146)
sequence
gaattctgtgtgcctgacattatatcagaactgattatctatgatgcaaa
cacataatttcttcttggcaaatgacactgaagagaaaactattcatctc
ttgaaatccaggaagctaacatttagaaagcaaggaaccagagacaagac
acatccttcaaaggtatagtgctagttctaaggcaaggcctacatttcca
actttgtcctgcaccttgatagtctctttatccatgagtttaccagtgat
aacaaaaacaataaccactgtaatccaagaagtaacattttgagtctcta
attactaaaaataacttatgtaaactccatatacattacatcactaaata
ctatcatgactgcacctagttccaaggggcagaagttgatctcagaggta
tttagtgatcaggctggatttttaaatttaagttctgggctagacagatt
gctgattgggccaaagcatttgccatgcatgttaatgacatgtttgattc
cccagaacctacagtaaaagaagaaaactgattgtacaatgttttcctat
gacctcaacacatatgcttttacctatgcacattggtacacacacacaca
cacacaaatattcttgaaagaataattccttttaaaatagaaaaaactct
aagtacttctgagtacagaaacaaacatttctctttgcacctaccacata
agcaacctggagcacttttgctaagtggaaaaaaaatttgcctccccatc
tactaatgaaaagtgatggtgggatggggaaggatcatggcatcctacca
tccatttgaatgaactaagaaagaaataaaaaataagtagctgggtaaaa
ccacacctgggcattattttccagcattgtttgggcatgaaaaatactag
atacaaaaaagcaaagccgaaggttattttggcttccatgttagaggctt
ctgtctatggtgcttgacctcatgcacttgagaaagtatgagagtagtgg
ggaatttagcagtgcagagtttgcttcaggtgactgaacttaagagaaga
aggacaatagaattctactggatcttggtgacactgccta
gaattcactctgaagcttttctggacaagcgtgtggtcctgatctctcag
actcctgagtgcccgagatcacactctcaggccaccaagctctgagaact
atccctttaatcgttttttttttctaagttattttatatgcaatgaaaat
aaggcttagaggagttgggtgactctccccagtcacatatattagaattc
gtaccacagtttacattttaaatgatgtctttaaatattacttttttggc
cacttttcatcgtgtttaatgtttttccatttctccgtgtacactgaaga
gagtttggactaagccagtaatgacctggtgaccttgaagatttctgagg
ttcctgttagtgtccttgctgctgtgggctttggaggcctgcagtaacca
tccctcctactcagacgtgacttctgtactcttccatgggattttccttc
tcccgggctgctggacactgtgcattgggtgtgagctggtgatagcttgg
ttactgtactgagcccaagaagagagtttctacagacaactgtgtcgagg
gtaagaagtgacaagggaaaggaggaaacagcttgagattcattaaagtt
cattattgaaatgctctccttttcttctggtgggaaaacactttgaggat
ctccatgggatgaatgggccgtacaagtaccacaggttgtcggcatgcca
acctcattcatctgcaggagctgggggcggggtttgtatagtttctaggg
tctttcaagtttctcttcccagaagtggttgactctaacaaatcgttcag
gaggaacgtctctctaatgtatttttgtatgggaggacttcctggggcag
agggagtcatgtgtatcagccggtctctgttcattgtgcaaaggcctgca
gccatctgaccacccagggcctgtgttttctagaaggcaagatgagacag
gattgacacctcagcctcaggcgatgacagatgccaactgctgtttttca
ctggattccgtgcactggatgctccggaagcaattgtggtttttgtctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_57163545_57164651
seq2: B6Ng01-158I02.b_48_1137

seq1  GAATTCTGTGTGCCTGACATTATATCAGAACTGATTATCTATGATGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTGCCTGACATTATATCAGAACTGATTATCTATGATGCAAA  50

seq1  CACATAATTTCTTCTTGGCAAATGACACTGAAGAGAAAACTATTCATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAATTTCTTCTTGGCAAATGACACTGAAGAGAAAACTATTCATCTC  100

seq1  TTGAAATCCAGGAAGCTAACATTTAGAAAGCAAGGAACCAGAGACAAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATCCAGGAAGCTAACATTTAGAAAGCAAGGAACCAGAGACAAGAC  150

seq1  ACATCCTTCAAAGGTATAGTGCTAGTTCTAAGGCAAGGCCTACATTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTTCAAAGGTATAGTGCTAGTTCTAAGGCAAGGCCTACATTTCCA  200

seq1  ACTTTGTCCTGCACCTTGATAGTCTCTTTATCCATGAGTTTACCAGTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTCCTGCACCTTGATAGTCTCTTTATCCATGAGTTTACCAGTGAT  250

seq1  AACAAAAACAATAACCACTGTAATCCAAGAAGTAACATTTTGAGTCTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAACAATAACCACTGTAATCCAAGAAGTAACATTTTGAGTCTCTA  300

seq1  ATTACTAAAAATAACTTATGTAAACTCCATATACATTACATCACTAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTAAAAATAACTTATGTAAACTCCATATACATTACATCACTAAATA  350

seq1  CTATCATGACTGCACCTAGTTCCAAGGGGCAGAAGTTGATCTCAGAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATGACTGCACCTAGTTCCAAGGGGCAGAAGTTGATCTCAGAGGTA  400

seq1  TTTAGTGATCAGGCTGGATTTTTAAATTTAAGTTCTGGGCTAGACAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGATCAGGCTGGATTTTTAAATTTAAGTTCTGGGCTAGACAGATT  450

seq1  GCTGATTGGGCCAAAGCATTTGCCATGCATGTTAATGACATGTTTGATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATTGGGCCAAAGCATTTGCCATGCATGTTAATGACATGTTTGATTC  500

seq1  CCCAGAACCTACAGTAAAAGAAGAAAACTGATTGTACAATGTTTTCCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAACCTACAGTAAAAGAAGAAAACTGATTGTACAATGTTTTCCTAT  550

seq1  GACCTCAACACATATGCTTTTACCTATGCACATTGGTACACACACACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCAACACATATGCTTTTACCTATGCACATTGGTACACACACACACA  600

seq1  CACACAAATATTCTTGAAAGAATAATTCCTTTTAAAATAGAAAAAACTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAATATTCTTGAAAGAATAATTCCTTTTAAAATAGAAAAAACTCT  650

seq1  AAGTACTTCTGAGTACAGAAACAAACATTTCTCTTTGCACCTACCACATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTTCTGAGTACAGAAACAAACATTTCTCTTTGCACCTACCACATA  700

seq1  AGCAACCTGGAGCACTTTTGCTAAGTGGAAAAAAAATTTGCCTCCCCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCTGGAGCACTTTTGCTAAGTGGAAAAAAAATTTGCCTCCCCATC  750

seq1  TACTAATGAAAAGTGATGGTGGGATGGGGAAGGATCATGGCATCCTACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAATGAAAAGTGATGGTGGGATGGGGAAGGATCATGGCATCCTACCA  800

seq1  TCCATTTGAATGAACTAAGAAAGAAATAAAAAATAAGTAGCTGGGTAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTGAATGAACTAAGAAAGAAATAAAAAATAAGTAGCTGGGTAAAA  850

seq1  CCACACCTGGGCATTATTTTCCAGCATTGTTTGGGCATGAAAAAATACTA  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCACACCTGGGCATTATTTTCCAGCATTGTTTGGGCATG-AAAAATACTA  899

seq1  GATACAAAAAAAGCAAAGGCCGAAGGGTTATTTTGGCTTCCATGTTCAGA  950
      ||||| ||||||||||| |||||| ||||||||||||||||||||| |||
seq2  GATAC-AAAAAAGCAAA-GCCGAA-GGTTATTTTGGCTTCCATGTT-AGA  945

seq1  GGCTTCTGTCTATGGTTGCTTGACCTCATGCACTTGAGAAAGTATGAGAG  1000
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGCTTCTGTCTATGG-TGCTTGACCTCATGCACTTGAGAAAGTATGAGAG  994

seq1  TAGTGGGAGAATTTAGCAAGTGGCAGAGGTTTGCTTCAGGGTGGCTGGAA  1050
      ||||||| ||||||||| ||| ||||| |||||||||| |||| |||  |
seq2  TAGTGGG-GAATTTAGC-AGT-GCAGA-GTTTGCTTCA-GGTGACTG--A  1037

seq1  ACATAAGAGAAGACAGAACAATAAGAATTCTAACTGAATACATGGTGACA  1100
      || |||||||||| || ||||| |||||||| |||| || | ||||||||
seq2  ACTTAAGAGAAGA-AGGACAAT-AGAATTCT-ACTGGAT-CTTGGTGACA  1083

seq1  CTGCCTA  1107
      |||||||
seq2  CTGCCTA  1090

seq1: chr15_57341083_57342146
seq2: B6Ng01-158I02.g_67_1115 (reverse)

seq1  AAGACAAAAACCACACTGGCTTTCCCGGGGCCATTCAGTTGCTCTGAATC  50
      ||||||||||||||| | ||||  |||| | ||| ||| ||| | |||||
seq2  AAGACAAAAACCACAATTGCTT--CCGGAG-CATCCAG-TGCACGGAATC  46

seq1  CAGTGAAAACAAGCAGTTTGCCATCTGGTCATCGCCCTGGGGCTGAGGTG  100
      |||||||||  ||||| ||| ||||| ||||||| |||| ||||||||||
seq2  CAGTGAAAAACAGCAG-TTGGCATCT-GTCATCG-CCTGAGGCTGAGGTG  93

seq1  TCAATCCCCTGTCCTTCATCCTGCCCTTCTTAGAAAAACACAGGCCCTGG  150
      |||||  ||||||  ||||| || ||||| ||| ||||||||||||||||
seq2  TCAAT--CCTGTC--TCATCTTG-CCTTC-TAG-AAAACACAGGCCCTGG  136

seq1  GTGGTCCAGATGGCTGCAGGCCTTTGCACAATGAACAGAGACCGGCTGAT  200
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGT-CAGATGGCTGCAGGCCTTTGCACAATGAACAGAGACCGGCTGAT  185

seq1  ACACATGACTCCCTCTGCCCCAGGAAGTCCTCCCATACAAAAATACATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGACTCCCTCTGCCCCAGGAAGTCCTCCCATACAAAAATACATTA  235

seq1  GAGAGACGTTCCTCCTGAACGATTTGTTAGAGTCAACCACTTCTGGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACGTTCCTCCTGAACGATTTGTTAGAGTCAACCACTTCTGGGAAG  285

seq1  GGAAACTTGAAAGACCCTAGAAACTATACAAACCCCGCCCCCAGCTCCTG  350
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTTGAAAGACCCTAGAAACTATACAAACCCCGCCCCCAGCTCCTG  335

seq1  CAGATGAATGAGGTTGGCATGCCGACAACCTGTGGTACTTGTACGGCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAATGAGGTTGGCATGCCGACAACCTGTGGTACTTGTACGGCCCA  385

seq1  TTCATCCCATGGAGATCCTCAAAGTGTTTTCCCACCAGAAGAAAAGGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCCATGGAGATCCTCAAAGTGTTTTCCCACCAGAAGAAAAGGAGA  435

seq1  GCATTTCAATAATGAACTTTAATGAATCTCAAGCTGTTTCCTCCTTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCAATAATGAACTTTAATGAATCTCAAGCTGTTTCCTCCTTTCCC  485

seq1  TTGTCACTTCTTACCCTCGACACAGTTGTCTGTAGAAACTCTCTTCTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACTTCTTACCCTCGACACAGTTGTCTGTAGAAACTCTCTTCTTGG  535

seq1  GCTCAGTACAGTAACCAAGCTATCACCAGCTCACACCCAATGCACAGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTACAGTAACCAAGCTATCACCAGCTCACACCCAATGCACAGTGT  585

seq1  CCAGCAGCCCGGGAGAAGGAAAATCCCATGGAAGAGTACAGAAGTCACGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGCCCGGGAGAAGGAAAATCCCATGGAAGAGTACAGAAGTCACGT  635

seq1  CTGAGTAGGAGGGATGGTTACTGCAGGCCTCCAAAGCCCACAGCAGCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTAGGAGGGATGGTTACTGCAGGCCTCCAAAGCCCACAGCAGCAAG  685

seq1  GACACTAACAGGAACCTCAGAAATCTTCAAGGTCACCAGGTCATTACTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTAACAGGAACCTCAGAAATCTTCAAGGTCACCAGGTCATTACTGG  735

seq1  CTTAGTCCAAACTCTCTTCAGTGTACACGGAGAAATGGAAAAACATTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCCAAACTCTCTTCAGTGTACACGGAGAAATGGAAAAACATTAAA  785

seq1  CACGATGAAAAGTGGCCAAAAAAGTAATATTTAAAGACATCATTTAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGATGAAAAGTGGCCAAAAAAGTAATATTTAAAGACATCATTTAAAAT  835

seq1  GTAAACTGTGGTACGAATTCTAATATATGTGACTGGGGAGAGTCACCCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTGTGGTACGAATTCTAATATATGTGACTGGGGAGAGTCACCCAA  885

seq1  CTCCTCTAAGCCTTATTTTCATTGCATATAAAATAACTTAGAAAAAAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTAAGCCTTATTTTCATTGCATATAAAATAACTTAGAAAAAAAAA  935

seq1  ACGATTAAAGGGATAGTTCTCAGAGCTTGGTGGCCTGAGAGTGTGATCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATTAAAGGGATAGTTCTCAGAGCTTGGTGGCCTGAGAGTGTGATCTC  985

seq1  GGGCACTCAGGAGTCTGAGAGATCAGGACCACACGCTTGTCCAGAAAAGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACTCAGGAGTCTGAGAGATCAGGACCACACGCTTGTCCAGAAAAGC  1035

seq1  TTCAGAGTGAATTC  1064
      ||||||||||||||
seq2  TTCAGAGTGAATTC  1049