MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-158I03
Chromosome	15 (Build37)
Map Location	5,219,356 - 5,219,797
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Plcxd3, C6, LOC100039214, 4930455B06Rik, C7, Card6, Rpl37, LOC100039281, Prkaa1, Ttc33, Ptger4
Downstream gene	LOC100039322, LOC100039308, LOC666291, LOC666319, LOC100039358, LOC666323
Link	Open Mouse BAC browser

Click to get alignment info.

name	Plcxd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239318 MGI:2442605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12274 MGI:88233
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039214 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039214
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 123 mRNAs, 3678 ESTs, 25 Proteins

name	4930455B06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223825 MGI:1921905
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 5 Proteins

name	C7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109828 MGI:88235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein

name	Card6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239319 MGI:3032959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 5 Proteins

name	Rpl37 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67281 MGI:1914531
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039281 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039281
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 477 ESTs, 5 Proteins

name	Prkaa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105787 MGI:2145955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc33 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67515 MGI:1914765
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptger4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19219 MGI:104311
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039322 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039322
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins pseudo : _no_value

name	LOC100039308 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039308
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC666291 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666291
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC666319 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666319
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100039358 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039358
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 65 ESTs, 1 Protein

name	LOC666323 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666323
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Plcxd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340686 GeneID:239318 MGI:2442605
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol-specific phospholipase C, X domain containing 3 transcript_id : NM_177355.2

name	C6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7709995 GeneID:12274 MGI:88233
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component 6 transcript_id : NM_016704.1

name	LOC100039214 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266367 GeneID:100039214
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 83 mRNAs, 1867 ESTs, 25 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 2 transcript_id : XM_001472369.1

name	LOC100039214 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266369 GeneID:100039214
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 102 mRNAs, 2273 ESTs, 25 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 3 transcript_id : XM_001472395.1

name	LOC100039214 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266365 GeneID:100039214
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 123 mRNAs, 3676 ESTs, 25 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 1 transcript_id : XM_001472352.1

name	4930455B06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266371 GeneID:223825 MGI:1921905
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 5 Proteins product : RIKEN cDNA 4930455B06 gene transcript_id : XM_127913.7

name	C7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266373 GeneID:109828 MGI:88235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein product : complement component 7 transcript_id : XM_356827.6

name	Card6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94398408 GeneID:239319 MGI:3032959
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 5 Proteins product : caspase recruitment domain family, member 6 transcript_id : XM_139295.4

name	Rpl37 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387412 GeneID:67281 MGI:1914531
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L37 transcript_id : NM_026069.2

name	LOC100039281 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266375 GeneID:100039281
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 475 ESTs, 5 Proteins product : similar to ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d, transcript variant 1 transcript_id : XM_001472493.1

name	LOC100039281 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266377 GeneID:100039281
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 385 ESTs, 5 Proteins product : similar to ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d, transcript variant 2 transcript_id : XM_001472511.1

name	Prkaa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94681060 GeneID:105787 MGI:2145955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase, AMP-activated, alpha 1 catalytic subunit transcript_id : NM_001013367.3

name	Ttc33 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129830 GeneID:67515 MGI:1914765
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 33 transcript_id : NM_026213.3

name	Ptger4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679530 GeneID:19219 MGI:104311
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prostaglandin E receptor 4 (subtype EP4) transcript_id : NM_008965.1

name	LOC100039358 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266380 GeneID:100039358
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 65 ESTs, 1 Protein product : similar to 5830457O10Rik protein transcript_id : XM_001472745.1

name	Plcxd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893495 CCDS:CCDS27362.1 GeneID:239318 MGI:2442605
definition	GO_function : GO:0004629 - phospholipase C activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : phosphatidylinositol-specific phospholipase C, X domain containing 3 protein_id : NP_796329.1

name	C6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7709996 GeneID:12274 MGI:88233
definition	GO_process : GO:0006956 - complement activation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : complement component 6 protein_id : NP_057913.1

name	LOC100039214 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266366 GeneID:100039214
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 1 protein_id : XP_001472402.1

name	LOC100039214 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266368 GeneID:100039214
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 2 protein_id : XP_001472419.1

name	LOC100039214 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266370 GeneID:100039214
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 3 protein_id : XP_001472445.1

name	4930455B06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149266372 GeneID:223825 MGI:1921905
definition	codon_start : 1 product : hypothetical protein LOC223825 protein_id : XP_127913.6

name	C7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149266374 GeneID:109828 MGI:88235
definition	codon_start : 1 product : complement component 7 protein_id : XP_356827.6

name	Card6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28481366 GeneID:239319 MGI:3032959
definition	codon_start : 1 product : hypothetical protein protein_id : XP_139295.2

name	Rpl37 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385572 GeneID:67281 MGI:1914531
definition	GO_component : GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : snoRNA MBII-240 product : ribosomal protein L37 protein_id : NP_080345.1

name	LOC100039281 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266376 GeneID:100039281
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001472543.1

name	LOC100039281 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266378 GeneID:100039281
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001472561.1

name	Prkaa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94681061 GeneID:105787 MGI:2145955
definition	EC_number : 2.7.1.- GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006695 - cholesterol biosynthesis [Evidence IEA]; GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0019395 - fatty acid oxidation [Evidence IMP]; GO:0006006 - glucose metabolism [Evidence IMP]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0006694 - steroid biosynthesis [Evidence IEA]; GO:0016126 - sterol biosynthesis [Evidence IEA] codon_start : 1 note : AMP-activated protein kinase, alpha 1 catalytic subunit product : protein kinase, AMP-activated, alpha 1 catalytic subunit protein_id : NP_001013385.3

name	Ttc33 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312920 CCDS:CCDS27364.1 GeneID:67515 MGI:1914765
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : osmosis responsive factor protein_id : NP_080489.1

name	Ptger4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679531 CCDS:CCDS27365.1 GeneID:19219 MGI:104311
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004957 - prostaglandin E receptor activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007189 - G-protein signaling, adenylate cyclase activating pathway [Evidence TAS]; GO:0030278 - regulation of ossification [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : prostaglandin E receptor EP4 subtype; prostaglandin E receptor 4 (EP4 subtype) product : prostaglandin E receptor 4, subtype EP4 protein_id : NP_032991.1

name	LOC100039358 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266381 GeneID:100039358
definition	codon_start : 1 product : similar to 5830457O10Rik protein protein_id : XP_001472795.1

name	LOC100039308 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039308
definition	number : 1 pseudo : _no_value

name	LOC666291 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666291
definition	number : 1 pseudo : _no_value

name	LOC666291 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666291
definition	number : 2 pseudo : _no_value

name	LOC666291 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666291
definition	number : 3 pseudo : _no_value

name	LOC666319 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666319
definition	number : 1 pseudo : _no_value

name	LOC666319 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666319
definition	number : 2 pseudo : _no_value

name	LOC666323 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666323
definition	number : 1 pseudo : _no_value

name	LOC100039322 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266379 GeneID:100039322
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins product : similar to ribosomal protein L22 like 1 pseudo : _no_value transcript_id : XR_030818.1

clone name	MSMg01-360I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382F02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-075J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151A10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-347I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424E01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-541H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136G02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name		B6Ng01-158I03.g
ACC		DH952439
length		970
definition		DH952439\|Mus musculus domesticus DNA, BAC clone: B6Ng01-158I03, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence		gaattcacagcctcaagtcccatgtaaaatccttgcaccagtgtatctat aactctctgtgttctgaagttcaggttgatttttgtatagttcttttttt tccacttggttgatttcaaccctgagtttgattatttcatgccttctact cctcttgggtgaatttgcttcttattgttctagagctttcagatgtgctg tcaagctgctagtgtattctctctccagtttcttttgggaggcactcaga gctatgtgttttcctcgtagggctgctttcgttgtgtcccataagtttgg gtatgttgtggtttcattttcattgaactataaaaagtctttaatttctt tatttatttcttccttgaccacgttatgattgagtgttgttcagcatcca aatatatgtgggctttctattatttgtgttgttattgaagaccaggctta gttcattgtgatatgataggctgcacggaattattcaaatattttcgtat ctcttgaggcccgttttgtgaacaattacatggtcagttttggagaaggt accataaggtgatgagaagaaggtatatccttttgttttaggataaaatg ttctatagatatctgttaaatccatttgtttcataacttctgttagtttc actgtgtctctgtttagtttctgtttacatgatctgtccattactgagag tggggtgttgaagtctgacattattattgggtgcagtgcaatgtgtgctt tgagctttagtaaagtttctttatgaacatgggtgcacttacacttggat atggaacatagatgtttataagtaagagttcatcttggtagatttacttt tgatgagtataaactattcttgatcatctttgtgataacctttaggtgaa agttgattttatttatatagacggctactccagttgtttcttgggaccat ttgcttggaaatttttttcc
quality values		Open. Hide. 61 47 55 47 52 12 14 26 10 8 12 18 18 10 11 41 52 49 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 38 43 34 37 30 30 41 49 45 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 59 59 59 59 59 61 61 61 59 59 59 55 59 52 59 59 59 61 61 61 61 61 61 61 61 61 61 49 59 59 59 59 59 61 59 59 61 61 61 61 61 61 61 61 59 59 59 59 59 59 59 59 55 59 59 61 59 52 59 50 55 43 52 59 59 59 61 59 59 61 61 61 61 59 59 59 59 52 59 59 59 52 52 61 61 61 59 49 59 59 59 59 49 61 59 59 59 59 59 59 52 43 61 61 61 61 61 61 59 59 49 52 49 52 59 59 59 59 59 59 59 61 61 61 61 59 59 59 61 59 59 59 59 59 59 59 59 59 59 59 59 61 59 59 61 61 61 61 61 61 59 61 59 59 59 59 59 59 52 61 59 61 61 59 61 61 61 61 61 59 59 59 59 59 59 59 49 49 61 59 61 61 59 59 59 59 59 59 59 59 49 59 61 61 59 59 59 59 55 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 59 59 59 59 59 59 61 61 59 59 59 59 59 61 61 61 61 61 59 59 59 59 59 59 61 61 61 59 59 59 59 59 59 61 61 61 61 61 61 52 52 52 52 52 52 55 55 52 55 55 55 55 55 52 55 49 55 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 55 52 55 52 55 55 55 52 52 61 61 61 61 61 61 61 61 50 50 50 50 50 50 50 55 50 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 37 55 37 35 49 31 43 50 55 55 61 31 50 50 50 49 50 61 61 61 61 61 61 61 61 61 61 61 50 35 47 43 50 50 50 45 50 43 52 61 61 61 61 50 50 50 47 43 50 50 61 61 61 61 50 45 50 31 42 61 61 45 61 50 61 61 61 53 32 39 32 34 31 32 39 61 61 61 61 40 52 53 53 46 43 47 38 42 38 42 31 50 53 50 39 42 42 42 61 61 61 61 61 61 61 32 61 61 16 37 38 39 16 38 38 50 53 52 39 46 52 57 52 34 57 57 40 57 57 50 57 53 34 57 38 47 52 32 38 26 31 30 35 57 53 53 33 57 57 53 50 36 47 47 30 53 57 57 57 52 53 30 57 45 52 52 53 53 52 52 36 52 43 50 53 47 36 42 50 57 42 45 26 32 30 45 57 57 52 43 41 18 30 40 52 29 37 47 52 41 39 52 53 42 43 53 34 52 41 43 32 27 47 53 53 53 53 53 45 53 36 53 53 33 47 31 38 23 50 53 38 31 46 31 23 38 40 24 34 30 45 53 57 34 38 50 53 35 31 34 33 46 30 40 42 53 57 52 30 31 24 50 52 57 52 42 36 48 28 57 39 53 52 33 38 30 34 38 25 9 28 37 37 37 29 29 35 23 33 33 57 40 27 33 29 32 35 27 39 24 31 26 31 53 31 52 40 37 33 33 57 33 33 44 27 32 28 53 22 29 16 33 41 57 36 34 40 57 30 33 29 57 26 24 31 33 41 35 37 27 29 53 34 18 23 34 29 27 32 31 32 24 28 25 29 24 39 32 34 18 19 19 30 16 44 25 28 32 24 30 29 14 31 19 29 25 51 29 35 35 31 39 24 30 30 31 33 48 20 33 28 29 19 33 39 26 29 36 33 15 35 25 33 17 51 51 21 28 22 39 30 36 29 28 13 16 43 20 20 29 18 29 43 41 21 18 34 29 29 28 20 23 41 14 14 22 24 28 28 36 36 19 16 46 10 19 10 5 39 14 13 26 41 23 11 32 15 46 22 31 51 29 20 25 30 10 17 5 36 51 18 27 29 41 31 29 22 28 28 17 5 24 14 23 33 18 22 15 11 29 22 28 20 34 28 24 16 13 46 21 28 9 23 25 27 18 27 12 21 19 25 46 7 6 15 21 30 25 24 28 38 17 19 18 31 32 38 44 10 24 28

Alignment Information

BAC End 1

BAC End 2

seq1: chr15_5219356_5219797
seq2: B6Ng01-158I03.g_599_1038 (reverse)

seq1  GGAAAACAATTTTCCAAGCAAATGGTATGAAGAAACAAGCAGGAGTAGCC  50
      |||||| || ||||||||||||||||   ||||||||| | |||||||||
seq2  GGAAAA-AAATTTCCAAGCAAATGGTCCCAAGAAACAA-CTGGAGTAGCC  48

seq1  ATCCTAATATCTGATAAGATTGACTTCCAACCCAAAGTCATCAAAAAAGA  100
       ||   |||    |||| ||  |||| || |  || || ||| | |||||
seq2  GTCTATATA---AATAAAATCAACTTTCACCTAAAGGTTATC-ACAAAGA  94

seq1  CAAGGAGGGACACTTCATTCTCATCAAAGGTAAAATCCTCCAAGAGGAAC  150
        |  | | | | || || ||||||||| || |||||  |||||| ||||
seq2  TGATCAAGAATAGTTTATACTCATCAAAAGT-AAATCTACCAAGATGAAC  143

seq1  TCTCAATTCTGAATATCTATGCTCCAAATAC------AAGAGCAGCCACA  194
      ||| | || | || ||||||| |||| || |      ||| ||| |||  
seq2  TCTTACTTATAAACATCTATGTTCCATATCCAAGTGTAAGTGCACCCATG  193

seq1  TTCACTAAAGAAACTTTAGTAAAGCTCAAAGCACACATTGCGCCTCACAC  244
      |||| ||||||||||||| |||||||||||||||||||||| |  ||| |
seq2  TTCA-TAAAGAAACTTTACTAAAGCTCAAAGCACACATTGCACTGCACCC  242

seq1  AATAATAGTGGGAGACTTCAACACACCACTTTCACCAATGGACAGATCAT  294
      ||||||| ||  |||||||||||| ||||| |||  ||||||||||||||
seq2  AATAATAATGTCAGACTTCAACACCCCACTCTCAGTAATGGACAGATCAT  292

seq1  GGAAACAGAAACTAAACAGGGACACACTGAAACTAACAGAAGTGATGAAA  344
      | ||||||||||||||||| |||||| |||||||||||||||| ||||||
seq2  GTAAACAGAAACTAAACAGAGACACAGTGAAACTAACAGAAGTTATGAAA  342

seq1  CAAATGGATCTGACAGATATCTACAGAACATTTTATCCTAAAACAAAAGG  394
      ||||||||| | ||||||||||| ||||||||||||||||||||||||||
seq2  CAAATGGATTTAACAGATATCTATAGAACATTTTATCCTAAAACAAAAGG  392

seq1  ATATACCTTCTTCTCAGCACCTCATGGTACCTTCTCCAAAATTGACCA  442
      |||||||||||||||| ||||| |||||||||||||||||| ||||||
seq2  ATATACCTTCTTCTCATCACCTTATGGTACCTTCTCCAAAACTGACCA  440

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information