BAC Information

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BAC

Clone NameB6Ng01-158K20
Chromosome15 (Build37)
Map Location 93,639,628 - 93,773,118
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042552, LOC100043283, Glt8d3, Yaf2, Zcrb1, Pphln1, LOC627623, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631
Downstream geneD630010B17Rik, Adamts20, Pus7l, Irak4, Twf1, Tmem117
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158K20.bB6Ng01-158K20.g
ACCDH952563DH952564
length949539
definitionDH952563|Mus musculus domesticus DNA, BAC clone: B6Ng01-158K20, 5' end.DH952564|Mus musculus domesticus DNA, BAC clone: B6Ng01-158K20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,772,496 - 93,773,118)(93,639,628 - 93,640,172)
sequence
gaattcagtctctcagcgccttagctgggtagaaatggcaggatctagca
caggacatgaaaatttactacttcactcaatagtagtaaactagatattt
atgtaataaaagacaacagtgtgatggaaggaaaaccagattatcttcca
tagcaaagaggaagtaaatacacaatgttcttgggtgggcactgacatca
atagaatgactgtaattagacactgagcatatgactatgaccttcaacag
tgtaaagacagaacactaagatacttggttcacggctcaatccacttggc
tctctcatcccttcactctcggtatctttcaaatcggcctaaatatatag
gatttctgtctctgtcattcagtgaggtgacaagaggacgagtacttcaa
aggaaatgcaatgcatatttctacccacagtgaaccatgggatctattgg
ggagcctgagaaaaatgactccagcaattataaattggaagcagagattg
gcttgagtctgcatttgtttacagctccatgattgaccctgataaggact
ttttggttgtcaactcacagaatactttttttttccaggttgtatgtttg
ttgtctgaaatgtgtgcttcttttttaaggcccaatagtattccattaca
cacacacacacacacacacctccctcagttgtttctacttctttgctgtt
gctaatactgccacaaaccacgggcatgcacacatttcctgtacccacta
cctttgattccttcgaaagtgaaaagcaggactgctgggtctgacaaacc
ctgtttttgaggcgcttctaccatgttattctccatgtacctttggggct
ctatgcctgctgagaatacccatgcgccctctctcgttggcatgctgatc
aacggtggttgtatttgtcttatttgcatggtggcaatttaaataaatg
tgtcatcggtgggcacagatattaataaatatcaactagttaggttatca
tttacattaataatgcttaaggttttttattttttatttttatttttttt
tcgagacatggtttctctgtgtagccctggctgtcctggaactcactctg
tagaccaggatgacctcgaactcagaaatctacctgcctctacctcccaa
ctgctgggattaaagacatgcgccaccactgcccggcatgcctaagtatt
taatatgattttatctgtttatcctatccactattaagaactgtgtgaca
tatgttatacttgcgtagcttggtcttcctgtgggactcctaacagtggg
aacaggagctgctgtctctgactctgttgcctgcattgggaccttttcct
cctgcagggcttctttgtgtagctttaatgggagaggaggtacttagtct
ttctgcaacttacatgccatggttgtttctcctttctgaagaggaacaga
ggagatggggaagagtgaaagtggtgggtgggagggact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_93772496_93773118
seq2: B6Ng01-158K20.b_46_668 (reverse)

seq1  AAAGAAGCACACATTTCAGACAACAAACATACAACCTGGAAAAAAAAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGCACACATTTCAGACAACAAACATACAACCTGGAAAAAAAAAGT  50

seq1  ATTCTGTGAGTTGACAACCAAAAAGTCCTTATCAGGGTCAATCATGGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTGAGTTGACAACCAAAAAGTCCTTATCAGGGTCAATCATGGAGC  100

seq1  TGTAAACAAATGCAGACTCAAGCCAATCTCTGCTTCCAATTTATAATTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACAAATGCAGACTCAAGCCAATCTCTGCTTCCAATTTATAATTGC  150

seq1  TGGAGTCATTTTTCTCAGGCTCCCCAATAGATCCCATGGTTCACTGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCATTTTTCTCAGGCTCCCCAATAGATCCCATGGTTCACTGTGGG  200

seq1  TAGAAATATGCATTGCATTTCCTTTGAAGTACTCGTCCTCTTGTCACCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATATGCATTGCATTTCCTTTGAAGTACTCGTCCTCTTGTCACCTC  250

seq1  ACTGAATGACAGAGACAGAAATCCTATATATTTAGGCCGATTTGAAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATGACAGAGACAGAAATCCTATATATTTAGGCCGATTTGAAAGAT  300

seq1  ACCGAGAGTGAAGGGATGAGAGAGCCAAGTGGATTGAGCCGTGAACCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAGAGTGAAGGGATGAGAGAGCCAAGTGGATTGAGCCGTGAACCAAG  350

seq1  TATCTTAGTGTTCTGTCTTTACACTGTTGAAGGTCATAGTCATATGCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTAGTGTTCTGTCTTTACACTGTTGAAGGTCATAGTCATATGCTCA  400

seq1  GTGTCTAATTACAGTCATTCTATTGATGTCAGTGCCCACCCAAGAACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTAATTACAGTCATTCTATTGATGTCAGTGCCCACCCAAGAACATT  450

seq1  GTGTATTTACTTCCTCTTTGCTATGGAAGATAATCTGGTTTTCCTTCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTTACTTCCTCTTTGCTATGGAAGATAATCTGGTTTTCCTTCCAT  500

seq1  CACACTGTTGTCTTTTATTACATAAATATCTAGTTTACTACTATTGAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTTGTCTTTTATTACATAAATATCTAGTTTACTACTATTGAGTG  550

seq1  AAGTAGTAAATTTTCATGTCCTGTGCTAGATCCTGCCATTTCTACCCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTAAATTTTCATGTCCTGTGCTAGATCCTGCCATTTCTACCCAGC  600

seq1  TAAGGCGCTGAGAGACTGAATTC  623
      |||||||||||||||||||||||
seq2  TAAGGCGCTGAGAGACTGAATTC  623

seq1: chr15_93639628_93640172
seq2: B6Ng01-158K20.g_69_613

seq1  GAATTCTGTCATCGGTGGGCACAGATATTAATAAATATCAACTAGTTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCATCGGTGGGCACAGATATTAATAAATATCAACTAGTTAGG  50

seq1  TTATCATTTACATTAATAATGCTTAAGGTTTTTTATTTTTTATTTTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATTTACATTAATAATGCTTAAGGTTTTTTATTTTTTATTTTTATT  100

seq1  TTTTTTTCGAGACATGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCGAGACATGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTC  150

seq1  ACTCTGTAGACCAGGATGACCTCGAACTCAGAAATCTACCTGCCTCTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTAGACCAGGATGACCTCGAACTCAGAAATCTACCTGCCTCTACC  200

seq1  TCCCAACTGCTGGGATTAAAGACATGCGCCACCACTGCCCGGCATGCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACTGCTGGGATTAAAGACATGCGCCACCACTGCCCGGCATGCCTA  250

seq1  AGTATTTAATATGATTTTATCTGTTTATCCTATCCACTATTAAGAACTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTAATATGATTTTATCTGTTTATCCTATCCACTATTAAGAACTGT  300

seq1  GTGACATATGTTATACTTGCGTAGCTTGGTCTTCCTGTGGGACTCCTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACATATGTTATACTTGCGTAGCTTGGTCTTCCTGTGGGACTCCTAAC  350

seq1  AGTGGGAACAGGAGCTGCTGTCTCTGACTCTGTTGCCTGCATTGGGACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAACAGGAGCTGCTGTCTCTGACTCTGTTGCCTGCATTGGGACCT  400

seq1  TTTCCTCCTGCAGGGCTTCTTTGTGTAGCTTTAATGGGAGAGGAGGTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCTGCAGGGCTTCTTTGTGTAGCTTTAATGGGAGAGGAGGTACT  450

seq1  TAGTCTTTCTGCAACTTACATGCCATGGTTGTTTCTCCTTTCTGAAGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTTCTGCAACTTACATGCCATGGTTGTTTCTCCTTTCTGAAGAGG  500

seq1  AACAGAGGAGATGGGGAAGAGTGAAAGTGGTGGGTGGGAGGGACT  545
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGGAGATGGGGAAGAGTGAAAGTGGTGGGTGGGAGGGACT  545