BAC Information

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BAC

Clone NameB6Ng01-159H18
Chromosome15 (Build37)
Map Location 71,186,538 - 71,346,449
singlet/doubletdoublet
Overlap gene1700010C24Rik
Upstream geneLOC383051
Downstream geneLOC100040847, Col22a1, Kcnk9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159H18.bB6Ng01-159H18.g
ACCDH953136DH953137
length1,0921,015
definitionDH953136|Mus musculus domesticus DNA, BAC clone: B6Ng01-159H18, 5' end.DH953137|Mus musculus domesticus DNA, BAC clone: B6Ng01-159H18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,345,351 - 71,346,449)(71,186,538 - 71,187,573)
sequence
gaattccaagtttctgggctaatatccacttatcagtgagtgcatatcat
gtgagttcttttgtgattgggttacctcactcaggatgagttctttggtg
attgggttacctaccctccagatccatccatttgcataagaatttcataa
attcattgtttttaatagctgagtagtactccattgtgtaaatgtacgat
attttctgtatccattcctctgttgagggacatttcggttctttccagct
tctggctattataaacaaggctgctatgaacatagtggagcatctcactg
gcttctaaatagataaaatgatgcaccctgtagtgctccagagcagagtt
tgggagaaaattccctaagaaaaattatatatatacatatagtctacata
attaaatcagtctaagtccaacaattattactgtgctgtgctgtatgtga
gagttttgttcttggctgcagtattaaactcctgtgtgactttgaacctg
tcatttgtcttctctagttctatttcccagcaagcagaaaaaaaaaaaaa
ctgaatcttccaggaaaacatcttcagggcttctctgctctgtttagtgt
tgtatctctgtcactgccaaaagcagtgggacagttgagacatacttgag
cgcgcgcgcgcgcacacacacacacacacacacacacacacacacacaca
cacaccccatcactaacaccatcaccacaaagccttccatgtcactagaa
gtgtggtgctggtcattttagtttacatctatggtcatctgctccccctt
acagtacccagtgaaagcacggagctctctagatgatttaatagatgcaa
tggtcagctatatttctttttagagataaagactctaagatacaaagaag
ttaagatacacatcctgccctgtccctcctcacacatactattaggcagc
agctaagccgaactttaattgaatgaacatcttatcatttctcagttgcc
ctctgactcagagatggattttcagaatatatacatctgtagatgttcca
ttgactcagttcccctgtggcagcctaggtttctctttatac
gaattcttcccacttttcgggctgtatcctttacatcatagatatgaatt
caaccttcccaaatcacatttctgtagcctgtcaaatgatattaggttga
taatgtgagttctagctggaaggagggtgagaagccactgtgttctcata
gatagtcctggtgctgatgaaataaccatgagcagaggtgtttgaaccag
attataagaatcatgttcttttcacattggtgtgtgtctcaaaggaaagg
actttaaagagtggaagagatcttagaagtaatgtgtcctgaggtcatct
agacaggaagcaacactgccaagatcagagtccagctctctctcgaggct
acttcagtgaagctgatgccccaacagagcttccctccctgtgggcactg
agtctctctcagaaccaagatcactagccaggactcatttgcccctgcaa
gctcattagagcactcaagctaccaacaactctctttgatttctggaacc
caagaactaccaaatgaactgctttgaagtttggtttccaccttcctttg
aaagggatgatttaagtggagtgacttggatcaaggaggtcagaagggag
attgaagcacactctttagtggcaagtttctagagacagaaaaaagtgag
attgcttctactggggaaagatgtgaggtatgggcaagccctatctggaa
ggattcaccaaagaatgctgctacctttgagtagggagatatgccttgaa
acaaaataaatccaattaatctcttccctcctttcgtgtccactctccaa
actttgctagtcccatctcacaattcctcccttgcttcacaatgcactct
cagactgaaaccccttaataataattgttgtcctgtgttatattagccgt
gtaaataatttaattaaaatagcgtttaatggaatcatatagttggcttt
attgaaaagaaaaattacgaagatgcctgttaatagggaagacatgccag
tctcaaatctacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_71345351_71346449
seq2: B6Ng01-159H18.b_43_1134 (reverse)

seq1  GTATAAAGAGAGAAACAAGGCTTGCACAGGGGAACTGAGTCAATAGAACA  50
      ||||||||||| || | |||||  |||||||||||||||||||| |||||
seq2  GTATAAAGAGA-AACCTAGGCTGCCACAGGGGAACTGAGTCAATGGAACA  49

seq1  TCTACAGATGTATATTATCTGAAAATCCATTCTCCTGGAGTCAGAGGGCA  100
      |||||||||||||||  |||||||||||| ||||   |||||||||||||
seq2  TCTACAGATGTATATATTCTGAAAATCCA-TCTC--TGAGTCAGAGGGCA  96

seq1  ACTGGGAAATGATAAGATGTTCATTCAATTAAAGGTTCGGCTTAGCTGCT  150
      |||| |||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACTGAGAAATGATAAGATGTTCATTCAATTAAA-GTTCGGCTTAGCTGCT  145

seq1  GCCTAATAGTATGGTGTGAGGAGGGACAGGGCAGGATGTGTATCTTAACT  200
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GCCTAATAGTAT-GTGTGAGGAGGGACAGGGCAGGATGTGTATCTTAACT  194

seq1  TCTTTGTATCTTAGAGTCTTTATCTCTAAAAAGAAATATTAGCTGACCAT  250
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCTTTGTATCTTAGAGTCTTTATCTCTAAAAAGAAATA-TAGCTGACCAT  243

seq1  TGCATCTATTAAATCATCTAGAGGCCTCCGTGCCTTCACTGGGTACTGTA  300
      |||||||||||||||||||||||  |||||||| ||||||||||||||||
seq2  TGCATCTATTAAATCATCTAGAGAGCTCCGTGCTTTCACTGGGTACTGTA  293

seq1  AGGGGGAGCAGATGACCATAGATGTAAACTAAAATGACCAGCACCACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAGCAGATGACCATAGATGTAAACTAAAATGACCAGCACCACACT  343

seq1  TCTAGTGACATGGAAGGCTTTGTGGTGATGGTGTTAGTGATGGGGTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTGACATGGAAGGCTTTGTGGTGATGGTGTTAGTGATGGGGTGTGT  393

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCGCGC  443

seq1  TCAAGTATGTCTCAACTGTCCCACTGCTTTTGGCAGTGACAGAGATACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTATGTCTCAACTGTCCCACTGCTTTTGGCAGTGACAGAGATACAA  493

seq1  CACTAAACAGAGCAGAGAAGCCCTGAAGATGTTTTCCTGGAAGATTCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAACAGAGCAGAGAAGCCCTGAAGATGTTTTCCTGGAAGATTCAGT  543

seq1  TTTTTTTTTTTTCTGCTTGCTGGGAAATAGAACTAGAGAAGACAAATGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTCTGCTTGCTGGGAAATAGAACTAGAGAAGACAAATGAC  593

seq1  AGGTTCAAAGTCACACAGGAGTTTAATACTGCAGCCAAGAACAAAACTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAAAGTCACACAGGAGTTTAATACTGCAGCCAAGAACAAAACTCT  643

seq1  CACATACAGCACAGCACAGTAATAATTGTTGGACTTAGACTGATTTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACAGCACAGCACAGTAATAATTGTTGGACTTAGACTGATTTAATT  693

seq1  ATGTAGACTATATGTATATATATAATTTTTCTTAGGGAATTTTCTCCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGACTATATGTATATATATAATTTTTCTTAGGGAATTTTCTCCCAA  743

seq1  ACTCTGCTCTGGAGCACTACAGGGTGCATCATTTTATCTATTTAGAAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCTCTGGAGCACTACAGGGTGCATCATTTTATCTATTTAGAAGCC  793

seq1  AGTGAGATGCTCCACTATGTTCATAGCAGCCTTGTTTATAATAGCCAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGATGCTCCACTATGTTCATAGCAGCCTTGTTTATAATAGCCAGAA  843

seq1  GCTGGAAAGAACCGAAATGTCCCTCAACAGAGGAATGGATACAGAAAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAAGAACCGAAATGTCCCTCAACAGAGGAATGGATACAGAAAATA  893

seq1  TCGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAACAATGAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAACAATGAATT  943

seq1  TATGAAATTCTTATGCAAATGGATGGATCTGGAGGGTAGGTAACCCAATC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAATTCTTATGCAAATGGATGGATCTGGAGGGTAGGTAACCCAATC  993

seq1  ACCAAAGAACTCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGAACTCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCACA  1043

seq1  TGATATGCACTCACTGATAAGTGGATATTAGCCCAGAAACTTGGAATTC  1099
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGCACTCACTGATAAGTGGATATTAGCCCAGAAACTTGGAATTC  1092

seq1: chr15_71186538_71187573
seq2: B6Ng01-159H18.g_69_1083

seq1  GAATTCTTCCCACTTTTCGGGCTGTATCCTTTACATCATAGATATGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCACTTTTCGGGCTGTATCCTTTACATCATAGATATGAATT  50

seq1  CAACCTTCCCAAATCACATTTCTGTAGCCTGTCAAATGATATTAGGTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTCCCAAATCACATTTCTGTAGCCTGTCAAATGATATTAGGTTGA  100

seq1  TAATGTGAGTTCTAGCTGGAAGGAGGGTGAGAAGCCACTGTGTTCTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGAGTTCTAGCTGGAAGGAGGGTGAGAAGCCACTGTGTTCTCATA  150

seq1  GATAGTCCTGGTGCTGATGAAATAACCATGAGCAGAGGTGTTTGAACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTCCTGGTGCTGATGAAATAACCATGAGCAGAGGTGTTTGAACCAG  200

seq1  ATTATAAGAATCATGTTCTTTTCACATTGGTGTGTGTCTCAAAGGAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAGAATCATGTTCTTTTCACATTGGTGTGTGTCTCAAAGGAAAGG  250

seq1  ACTTTAAAGAGTGGAAGAGATCTTAGAAGTAATGTGTCCTGAGGTCATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAAGAGTGGAAGAGATCTTAGAAGTAATGTGTCCTGAGGTCATCT  300

seq1  AGACAGGAAGCAACACTGCCAAGATCAGAGTCCAGCTCTCTCTCGAGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGAAGCAACACTGCCAAGATCAGAGTCCAGCTCTCTCTCGAGGCT  350

seq1  ACTTCAGTGAAGCTGATGCCCCAACAGAGCTTCCCTCCCTGTGGGCACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGTGAAGCTGATGCCCCAACAGAGCTTCCCTCCCTGTGGGCACTG  400

seq1  AGTCTCTCTCAGAACCAAGATCACTAGCCAGGACTCATTTGCCCCTGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTCTCAGAACCAAGATCACTAGCCAGGACTCATTTGCCCCTGCAA  450

seq1  GCTCATTAGAGCACTCAAGCTACCAACAACTCTCTTTGATTTCTGGAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTAGAGCACTCAAGCTACCAACAACTCTCTTTGATTTCTGGAACC  500

seq1  CAAGAACTACCAAATGAACTGCTTTGAAGTTTGGTTTCCACCTTCCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACTACCAAATGAACTGCTTTGAAGTTTGGTTTCCACCTTCCTTTG  550

seq1  AAAGGGATGATTTAAGTGGAGTGACTTGGATCAAGGAGGTCAGAAGGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGATGATTTAAGTGGAGTGACTTGGATCAAGGAGGTCAGAAGGGAG  600

seq1  ATTGAAGCACACTCTTTAGTGGCAAGTTTCTAGAGACAGAGAGAGGTGAG  650
      |||||||||||||||||||||||||||||||||||||||| | | |||||
seq2  ATTGAAGCACACTCTTTAGTGGCAAGTTTCTAGAGACAGAAAAAAGTGAG  650

seq1  ATTGCTTCTACTGGGGAAAAGATGTGAGGTATGGGCCAGCCTTATCTGGA  700
      |||||||||||||||| ||||||||||||||||||| |||| ||||||||
seq2  ATTGCTTCTACTGGGG-AAAGATGTGAGGTATGGGCAAGCCCTATCTGGA  699

seq1  AGGCATTCACCAAAGAATGCTGCTACTTTAGAGTAGGGAGATATGCCTTG  750
      ||| |||||||||||||||||||||| || ||||||||||||||||||||
seq2  AGG-ATTCACCAAAGAATGCTGCTACCTTTGAGTAGGGAGATATGCCTTG  748

seq1  AAAGAAAAATAAAATATAATTAAATCTCTTCCCTCCTTTCCTGTCCACTC  800
      ||| ||||   ||||  |||| |||||||||||||||||| |||||||||
seq2  AAACAAAA--TAAATCCAATT-AATCTCTTCCCTCCTTTCGTGTCCACTC  795

seq1  TCCAAACTTTTCTATGTCCCATCTCTACAATTCCTCCCTTGCCTCACAAT  850
      |||||||||| ||| |||||||||| |||||||||||||||| |||||||
seq2  TCCAAACTTTGCTA-GTCCCATCTC-ACAATTCCTCCCTTGCTTCACAAT  843

seq1  GCACTCTCAGACTGATAATCTCCTTATATTATTATTGTTGTTCTTGTTGT  900
      ||||||||||||||  || | ||||| || || |||||||| ||   |||
seq2  GCACTCTCAGACTG--AAACCCCTTA-ATAATAATTGTTGTCCT--GTGT  888

seq1  TATTATTTGCTGTTGTTAAATAATTTATTTTAAATAGCGTTTAAATGGAA  950
      || |||| || ||   ||||||||||| || ||||||||||| |||||||
seq2  TA-TATTAGCCGT--GTAAATAATTTAATTAAAATAGCGTTT-AATGGAA  934

seq1  TCCATATAGTTTGCTTTATTGAAAAGAAAATATAGGAAGGAATGCCTGTT  1000
      | ||||||||| ||||||||||||||||||  || ||||  |||||||||
seq2  T-CATATAGTTGGCTTTATTGAAAAGAAAAATTACGAAG--ATGCCTGTT  981

seq1  AATTAGGGAGATCATGGCAGTCTCAATATCTACTTT  1036
      || ||||||   |||| ||||||||| |||||||||
seq2  AA-TAGGGAAGACATGCCAGTCTCAA-ATCTACTTT  1015