BAC Information

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BAC

Clone NameB6Ng01-159O14
Chromosome6 (Build37)15 (Build37)
Map Location 18,835,441 - 18,835,96845,914,505 - 45,915,502
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159O14.bB6Ng01-159O14.g
ACCDH953438DH953439
length9181,003
definitionDH953438|Mus musculus domesticus DNA, BAC clone: B6Ng01-159O14, 5' end.DH953439|Mus musculus domesticus DNA, BAC clone: B6Ng01-159O14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,441 - 18,835,968)(45,914,505 - 45,915,502)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcctttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctaggtcttacaacacaagccattgctgtt
ctgttcaggaaatttcccctgtgtccatatcttcaaggcttttccccact
ttctcttctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagataagtatggatcgattcaca
ttcttctacatgataacaaccagttgtgccagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcaaagatcaagtg
accataggtgtgagtgttcatttctgggtcttcaattctgttccattggt
ctacttgtctgtctctataccagtaccatgcaggttttatcacaattgct
ctgtagtaaagctttaagtcaggcatggtgattccaccagaggttctttt
atccttgagaagagttttcgcgatcctcggttttttgttattccagatga
atctgccaattgccctttataattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatctttaatttctttcttcagagacttgaagttttatcatatagat
ctttcacttccttagtta
gaattctttgtttagctctgtaccacattttttaataaggttatttggtt
ctctggagtctagcttcttgagttctgtgcatatattgggtattacccct
ctatcagatgtaagattggtaatgatattttccaaatctgttgtttgtct
ttttgtcttatggacagtcttctttgccttacagaaattttgcaatttta
tgaggtcccatttgatgattcttgatcttacagcacaatccattggtgtt
ctgtttaggatttttttcacctgtgcccgtgtgtccgaggctcttcccca
ctttctcctctataagttgcagtgtctctggttttatgtgaagctctttg
atccacttggatcaagctttgtacgatgagataagaatgaattgattttc
attcttctcactggtgaccaccagctgaaccagcaccatttgtttaattt
cagtatttcagctagcaggggacaatttagttttcttctatcaagaatca
caagaagaagttgtgttactttgtttctataatttgatttcttctttcca
ggtctttgtactagactgtaagtttgttatataaacaaagtagctcttct
ttactattttatggtatttttatatttatgactcatgaatttaatttgga
tatggaatgggtagaatgtgcacaaacccacaggtttgcaccattcatat
gtagaactcaaaggccaatgtaagagagtcagttttcttcttccacaatg
tggtgcccaggatcaaattcctattgcttggtttggtttatagcattttt
atccactgatttagctcattggtcccgtgtccactattttgttgtatatt
ctattatatagtatttagtgttaaaattatctattacttttatggctttt
agttttctgtacttggggtgggtattcatcaaaagaatggtggatggtgg
tccactttattttttatcaaccacaatgctgggtgtggggtctttatgct
tgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835441_18835968
seq2: B6Ng01-159O14.b_50_577 (reverse)

seq1  CCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAG  50
      |||||| |||||| | ||||||||||||||||||||||| ||||||||||
seq2  CCCAGAAATGAACACTCACACCTATGGTCACTTGATCTTTGACAAGGGAG  50

seq1  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100

seq1  CACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATC  150
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CACAACTGGTTGTTATCATGTAGAAGAATGTGAATCGATCCATACTTATC  150

seq1  TCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  200

seq1  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAGAGACACTGAAACTTATAGAAGAGAAAGTGGGGAAAAGCCTTGAAGAT  250

seq1  ATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGT  299
      |||| || ||||| ||| ||||||||||||||||||||||| |||| |||
seq2  ATGGACACAGGGG-AAATTTCCTGAACAGAACAGCAATGGCTTGTGTTGT  299

seq1  GAGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCA  349
       ||    ||||| |||||||||||||||||||||||||||||||||||||
seq2  AAGACCTAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCA  349

seq1  AGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAA  399
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAGGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAA  399

seq1  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATA  449

seq1  TAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATA  499
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAA  499

seq1  AATGGGGCTCAGAACTGAACAAAGAATTC  528
      |||||||||||||||||||||||||||||
seq2  AATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr15_45914505_45915502
seq2: B6Ng01-159O14.g_68_1070 (reverse)

seq1  CCAAGCATAAAGA-CACACACACAGCATTACTGCTGGTATAAA--TAAGT  47
      ||||||||||||| | ||||| |||||||   | || || |||   ||||
seq2  CCAAGCATAAAGACCCCACACCCAGCATTGTGGTTGATAAAAAATAAAGT  50

seq1  GTGACAACAT-CACCACTCTTTTGATGAATA-CCAACCCAAGTACAGAAA  95
      |   || ||| ||||| |||||||||||||| ||| ||||||||||||||
seq2  GGACCACCATCCACCATTCTTTTGATGAATACCCACCCCAAGTACAGAAA  100

seq1  ACTAAAAGCCAT-AAAGTAATAGATAAATTTTAACACTAAATACTATATA  144
      |||||||||||| |||||||||||| ||||||||||||||||||||||||
seq2  ACTAAAAGCCATAAAAGTAATAGAT-AATTTTAACACTAAATACTATATA  149

seq1  ATAGAATATACAACAAAATAGTGGACACGGGACCAATGAGCTAAATCAGT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATATACAACAAAATAGTGGACACGGGACCAATGAGCTAAATCAGT  199

seq1  GGATAAAAATGCTATAAACCAAACCAAGCAATAGGAATTTGATCCTGGGC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAAAATGCTATAAACCAAACCAAGCAATAGGAATTTGATCCTGGGC  249

seq1  ACCACATTGTGGAAGAAGAAAACTGACTCTCTTACATTGGCCTTTGAGTT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATTGTGGAAGAAGAAAACTGACTCTCTTACATTGGCCTTTGAGTT  299

seq1  CTACATATGAATGGTGCAAACCTGTGGGTTTGTGCACATTCTACCCATTC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATATGAATGGTGCAAACCTGTGGGTTTGTGCACATTCTACCCATTC  349

seq1  CATATCCAAATTAAATTCATGAGTCATAAATATAAAAATACCATAAAATA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCCAAATTAAATTCATGAGTCATAAATATAAAAATACCATAAAATA  399

seq1  GTAAAGAAGAGCTACTTTGTTTATATAACAAACTTACAGTCTAGTACAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGAAGAGCTACTTTGTTTATATAACAAACTTACAGTCTAGTACAAA  449

seq1  GACCTGGAAAGAAGAAATCAAATTATAGAAACAAAGTAACACAACTTCTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGAAAGAAGAAATCAAATTATAGAAACAAAGTAACACAACTTCTT  499

seq1  CTTGTGATTCTTGATAGAAGAAAACTAAATTGTCCCCTGCTAGCTGAAAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGATTCTTGATAGAAGAAAACTAAATTGTCCCCTGCTAGCTGAAAT  549

seq1  ACTGAAATTAAACAAATGGTGCTGGTTCAGCTGGTGGTCACCAGTGAGAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAATTAAACAAATGGTGCTGGTTCAGCTGGTGGTCACCAGTGAGAA  599

seq1  GAATGAAAATCAATTCATTCTTATCTCATCGTACAAAGCTTGATCCAAGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAAATCAATTCATTCTTATCTCATCGTACAAAGCTTGATCCAAGT  649

seq1  GGATCAAAGAGCTTCACATAAAACCAGAGACACTGCAACTTATAGAGGAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAAAGAGCTTCACATAAAACCAGAGACACTGCAACTTATAGAGGAG  699

seq1  AAAGTGGGGAAGAGCCTCGGACACACGGGCACAGGTGAAAAAAATCCTAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGGGAAGAGCCTCGGACACACGGGCACAGGTGAAAAAAATCCTAA  749

seq1  ACAGAACACCAATGGATTGTGCTGTAAGATCAAGAATCATCAAATGGGAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACACCAATGGATTGTGCTGTAAGATCAAGAATCATCAAATGGGAC  799

seq1  CTCATAAAATTGCAAAATTTCTGTAAGGCAAAGAAGACTGTCCATAAGAC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAAAATTGCAAAATTTCTGTAAGGCAAAGAAGACTGTCCATAAGAC  849

seq1  AAAAAGACAAACAACAGATTTGGAAAATATCATTACCAATCTTACATCTG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACAAACAACAGATTTGGAAAATATCATTACCAATCTTACATCTG  899

seq1  ATAGAGGGGTAATACCCAATATATGCACAGAACTCAAGAAGCTAGACTCC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGGGGTAATACCCAATATATGCACAGAACTCAAGAAGCTAGACTCC  949

seq1  AGAGAACCAAATAACCTTATTAAAAAATGTGGTACAGAGCTAAACAAAGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACCAAATAACCTTATTAAAAAATGTGGTACAGAGCTAAACAAAGA  999

seq1  ATTC  998
      ||||
seq2  ATTC  1003