BAC Information

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BAC

Clone NameB6Ng01-161N14
Chromosome15 (Build37)
Map Location 86,082,141 - 86,273,078
singlet/doubletdoublet
Overlap geneTbc1d22a
Upstream geneFbln1, Atxn10, EG223745, Wnt7b, LOC100042240, Ppara, 2210021J22Rik, Pkdrej, AW124722, Gtse1, Trmu, Celsr1, BC021523, Cerk, LOC100042300
Downstream geneLOC100042309
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161N14.bB6Ng01-161N14.g
ACCDH954849DH954850
length1,066310
definitionDH954849|Mus musculus domesticus DNA, BAC clone: B6Ng01-161N14, 5' end.DH954850|Mus musculus domesticus DNA, BAC clone: B6Ng01-161N14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,272,010 - 86,273,078)(86,082,141 - 86,082,450)
sequence
gaattcacctgttcctctgatggtctctgcattttctcggaattctagtg
aggttgatttgggctcttgtcattctgtcccaatttcttttatatattat
atccctgtgggcaaaggattttctttaaatctttattctagctgagtaat
cttctccccctctgtgtcacaatttcctttaaacatttttttactgcatg
tatttgcctctgtgtgaacgcacacactcacacgccatatgcatatgcac
atgcatggcatagcatgcatgtggaggtcagaggaccgcctggagtagcc
gttcctctccttccaccatgtaagttctggtgatcagactcaacagctct
tgagtcttggtggtaggcacccttacctgctgagggatcctacacatgcc
ccgctcgtgctttctctttaattcatttatcacacttgactctgagggtt
ttcagtcttgcacactgttgtagttcccttttcttctccctacatttaat
atctttcttgttccatctccaacagtccaagaatattccaggctgtatct
caggcacctcctcacacacccctctctgaagctgtcttttctgctgactc
taatgtctgtgactcccttcactggaacataagcctgttgggattccctg
aagctgctttcaaaaagtgccttacggggacattgagcctggctacttga
agtagattttcaatgggcaacttttccaggcaaccatgatgtgacccgga
gtcccaagcccacctgaatgtaggacaatggttggaaagtgtatgtgggt
ggatccttccttttttcattaccttcatggccaaaacttaagaaaaggaa
gtctagcacctggtagctctgaacagtgtccaaggttgtagtagttgcct
tcattaaaactaatcagcagatcctagaaatcacaaggcagagttctggg
taatgcagctttggagcattctttcagtttctcaactaaagttcccccag
atgcttggtctctaagtggtgttcatgttgtaaaccacactagcctgggg
gggtgtttctggtgag
aagacaggtggtgaatgccaggctgctgtcacaggacactgcactgggca
cctcataggacccacattgctttccaagatcaggggtgggctgagggttc
ttctggtgaggcctgtcctctttgttgaagatgtcacttaaactttgtcc
ccatatggctttgcttttgtatatgtacggaaagagaaatagagcaagac
acagagaaggagcaaggatggagacaggacagtgctagagttagagaaag
agagagggaggagggagacaaggagagagggaaggaagagggggccagag
gaggggaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_86272010_86273078
seq2: B6Ng01-161N14.b_49_1114 (reverse)

seq1  CTCACCAG-AACACACCCCCAGGCTAGTGTGGTTTTTACAAACATGAACA  49
      |||||||| ||||| |||||||||||||||||  ||||| ||||||||||
seq2  CTCACCAGAAACACCCCCCCAGGCTAGTGTGG--TTTAC-AACATGAACA  47

seq1  CCACTTCAGAGACCAAGCATCTGGGGGAACTCTAAGTTGAGAAACTTGAA  99
      |||||| |||||||||||||||||||||||| | ||||||||||| ||||
seq2  CCACTT-AGAGACCAAGCATCTGGGGGAACT-TTAGTTGAGAAAC-TGAA  94

seq1  AGAATGGCCTCAAAGCTGCATTACCCAGACTCCTGCCTTGTGATTTCTGG  149
      ||||| ||  |||||||||||||||||||   |||||||||||||||| |
seq2  AGAAT-GCTCCAAAGCTGCATTACCCAGAACTCTGCCTTGTGATTTCTAG  143

seq1  GATCTGCTGATTAGTTTTAATG-AGGCAACTACTACAACC-TGGACACTG  197
      |||||||||||||||||||||| ||||||||||||||||| |||||||||
seq2  GATCTGCTGATTAGTTTTAATGAAGGCAACTACTACAACCTTGGACACTG  193

seq1  TTCAGAGCTACCAGGTGCTAGACTTTCCTTTCTT-AGTTTTGGCCATGAA  246
      ||||||||||||||||||||||||| | |||||| |||||||||||||||
seq2  TTCAGAGCTACCAGGTGCTAGACTTCCTTTTCTTAAGTTTTGGCCATGAA  243

seq1  GGTAATGAAAAAAGGAAGGATCCACCCACATACACTTTCCAACCATTGTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGAAAAAAGGAAGGATCCACCCACATACACTTTCCAACCATTGTC  293

seq1  CTACATTCAGGTGGGCTTGGGACTCCGGGTCACATCATGGTTGCCTGGAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTCAGGTGGGCTTGGGACTCCGGGTCACATCATGGTTGCCTGGAA  343

seq1  AAGTTGCCCATTGAAAATCTACTTCAAGTAGCCAGGCTCAATGTCCCCGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCCCATTGAAAATCTACTTCAAGTAGCCAGGCTCAATGTCCCCGT  393

seq1  AAGGCACTTTTTGAAAGCAGCTTCAGGGAATCCCAACAGGCTTATGTTCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACTTTTTGAAAGCAGCTTCAGGGAATCCCAACAGGCTTATGTTCC  443

seq1  AGTGAAGGGAGTCACAGACATTAGAGTCAGCAGAAAAGACAGCTTCAGAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGGGAGTCACAGACATTAGAGTCAGCAGAAAAGACAGCTTCAGAG  493

seq1  AGGGGTGTGTGAGGAGGTGCCTGAGATACAGCCTGGAATATTCTTGGACT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGTGTGAGGAGGTGCCTGAGATACAGCCTGGAATATTCTTGGACT  543

seq1  GTTGGAGATGGAACAAGAAAGATATTAAATGTAGGGAGAAGAAAAGGGAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGATGGAACAAGAAAGATATTAAATGTAGGGAGAAGAAAAGGGAA  593

seq1  CTACAACAGTGTGCAAGACTGAAAACCCTCAGAGTCAAGTGTGATAAATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAACAGTGTGCAAGACTGAAAACCCTCAGAGTCAAGTGTGATAAATG  643

seq1  AATTAAAGAGAAAGCACGAGCGGGGCATGTGTAGGATCCCTCAGCAGGTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAGAGAAAGCACGAGCGGGGCATGTGTAGGATCCCTCAGCAGGTA  693

seq1  AGGGTGCCTACCACCAAGACTCAAGAGCTGTTGAGTCTGATCACCAGAAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGCCTACCACCAAGACTCAAGAGCTGTTGAGTCTGATCACCAGAAC  743

seq1  TTACATGGTGGAAGGAGAGGAACGGCTACTCCAGGCGGTCCTCTGACCTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGGTGGAAGGAGAGGAACGGCTACTCCAGGCGGTCCTCTGACCTC  793

seq1  CACATGCATGCTATGCCATGCATGTGCATATGCATATGGCGTGTGAGTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCATGCTATGCCATGCATGTGCATATGCATATGGCGTGTGAGTGT  843

seq1  GTGCGTTCACACAGAGGCAAATACATGCAGTAAAAAAATGTTTAAAGGAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGTTCACACAGAGGCAAATACATGCAGTAAAAAAATGTTTAAAGGAA  893

seq1  ATTGTGACACAGAGGGGGAGAAGATTACTCAGCTAGAATAAAGATTTAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGACACAGAGGGGGAGAAGATTACTCAGCTAGAATAAAGATTTAAA  943

seq1  GAAAATCCTTTGCCCACAGGGATATAATATATAAAAGAAATTGGGACAGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCCTTTGCCCACAGGGATATAATATATAAAAGAAATTGGGACAGA  993

seq1  ATGACAAGAGCCCAAATCAACCTCACTAGAATTCCGAGAAAATGCAGAGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAAGAGCCCAAATCAACCTCACTAGAATTCCGAGAAAATGCAGAGA  1043

seq1  CCATCAGAGGAACAGGTGAATTC  1069
      |||||||||||||||||||||||
seq2  CCATCAGAGGAACAGGTGAATTC  1066

seq1: chr15_86082141_86082450
seq2: B6Ng01-161N14.g_72_381

seq1  AAGACAGGTGGTGAATGCCAGGCTGCTGTCACAGGACACTGCACTGGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGGTGGTGAATGCCAGGCTGCTGTCACAGGACACTGCACTGGGCA  50

seq1  CCTCATAGGACCCACATTGCTTTCCAAGATCAGGGGTGGGCTGAGGGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATAGGACCCACATTGCTTTCCAAGATCAGGGGTGGGCTGAGGGTTC  100

seq1  TTCTGGTGAGGCCTGTCCTCTTTGTTGAAGATGTCACTTAAACTTTGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTGAGGCCTGTCCTCTTTGTTGAAGATGTCACTTAAACTTTGTCC  150

seq1  CCATATGGCTTTGCTTTTGTATATGTACGGAAAGAGAAATAGAGCAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATGGCTTTGCTTTTGTATATGTACGGAAAGAGAAATAGAGCAAGAC  200

seq1  ACAGAGAAGGAGCAAGGATGGAGACAGGACAGTGCTAGAGTTAGAGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAGGAGCAAGGATGGAGACAGGACAGTGCTAGAGTTAGAGAAAG  250

seq1  AGAGAGGGAGGAGGGAGACAAGGAGAGAGGGAAGGAAGAGGGGGCCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGGAGGAGGGAGACAAGGAGAGAGGGAAGGAAGAGGGGGCCAGAG  300

seq1  GAGGGGAAAG  310
      ||||||||||
seq2  GAGGGGAAAG  310