BAC Information

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BAC

Clone NameB6Ng01-162B21
Chromosome15 (Build37)
Map Location 40,507,454 - 40,508,578
singlet/doubletsinglet
Overlap geneZfpm2
Upstream geneRims2, Tm7sf4, Dpys, Lrp12, LOC100039130, LOC670013, LOC664872
Downstream genePpia-ps25
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162B21.bB6Ng01-162B21.g
ACCDH955036DH955037
length1,1881,124
definitionDH955036|Mus musculus domesticus DNA, BAC clone: B6Ng01-162B21, 5' end.DH955037|Mus musculus domesticus DNA, BAC clone: B6Ng01-162B21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttgctgctgctgagggccatgaatgggtccaaggccacacagt
ggaagagtttggtggtgatgtctgtggctcatattactactagagaccca
gagaacctctcttagctgaacagccacctgggactaggactagatgttca
agggctctgctgaactggccttgcccctcataggctgcagcacttcggag
aacctatactgaacctcacctgggcagcacagtaaagttgtccttgatag
tcgggtctgcagttgagcatgccagagagtgtgagtgagagagagctggc
cccatcactcatctgccgtgaagtgtagtgggtgctggggtgatgccctt
tccccttgtcccactgcagtagttgggagacctggtcctgaagccatgac
agtgagagagctatgcctgcccatcactggctgtagcacacgggaaagcc
gaccctacacttggacggggaagtggaggtagagcaggccctgatggcta
gggatgagtcagtcttgagggtgtgagaggggaaagctgtcccagcccct
caccagctgcggaacatgggagagcagcccctgagccaagactgggcagt
acagtagtgctggctctggaggtgtgggtgcaagtaagccttgcttaagg
gcatggcagcaggatagctgaccctgtttcctgccagtggagaaactggg
tagcctggccaagagctctccattgtggggctgatgccagaaagctggcc
agatcagctaccacttaggcccagctccagggcactgagttgtcccaccc
caacatctaccaaatctattaactgctgaagcaagtgaaatggctagtcc
tgctgatccaagtgcaggctctccatgacacagggcaacaacaagataac
tgggaggagtccagatgaggatataatattttattgatgctgtcacagga
agccagacacctcaatccagaccaatgacacactacaatgaacatttgta
agtgaagatgtatagactggggacacactggtgacttattacagctccca
tgatgagaggtttccatggctcggctatttaatctatcttaaccttaacc
taatttattaatcacttaaggggtcttggtgagggaaggttgccaggcca
gaggggaatatatattaggggatgaggggcgacatcga
gaattctccctagcaaatagatggaacaacagaataagatgccagaggct
gatgttctatttcttaattgaagcaattctattgtttggtgtcggcagtg
aggggcagaaatgtcataagtgtaaaatgttaatagtgcaaaaataacat
aaaaactacttttaaaaataaagaaagcatacaaaaaatgttgtaagagc
ctggaaaacacagatttttatccatgtattaattctgacagtaacaaagt
actttcatttaccaatccctcacactgagagagctcatcttttttctacc
tgtaatgaaatttcaagttgctcccccatggtccagcactgtaaccctaa
aataagatgcctttgacttttgagacaacacttccacttctctagagtga
ggaacacatcaaggaaacatggtgctcagaggagtctccactcacctgtg
atttgcctggcctacagggtggcataaaggtaatatattttacccttgaa
tcaagctatggacagatacctcccatttgtaacttcagtcagctctcagt
ccatgtgaagtcacttggatttaaatcctttagtgttctttgaataaaac
aatatgcataaacaaaaacaccatatagactgatatgttttttgtaacta
aaaaaagcaatattctaaaatacggtgtctatgtatacatttctacattt
ccgaatttttgatgctattgataaacttgtctttgctgaattttagttgt
ctcagtcatgttttggatagctctaactcaaacttagtaaaaggtaagta
tcattcttacatagtattgatatgaaagtggatccttatctagtttcatc
ctatgtggagagaaagggacggacctagctaacttgctatatcataagta
tcagaaggaagagtgataaataagaaggtgccttttctttaatgtttacc
atttctttggaattgtgatacgtcatttgcatttactttttccaaactgt
ttgtaccctttcccttctcttaaatgctggcttatttctcactgctgttg
ttaaaatacatacacatggggttggcgtgtacataatatttccaaatgcg
aaatatctacttattcaggctgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_40507454_40508578
seq2: B6Ng01-162B21.g_66_1189 (reverse)

seq1  GACAGACTGAATAAGTAG-TATTTCTGCATTTGGAAATATAATGTACACG  49
      ||||| |||||||||||| |||||| |||||||||||||| |||||||||
seq2  GACAGCCTGAATAAGTAGATATTTC-GCATTTGGAAATATTATGTACACG  49

seq1  C---ACACATGTGTATGTA-TTTAACAACAAGCAGTGAGAAAATAGGCCA  95
      |    | |||||||||||| ||||||||| ||||||||| ||||| ||||
seq2  CCAACCCCATGTGTATGTATTTTAACAAC-AGCAGTGAG-AAATAAGCCA  97

seq1  GGCATTTAAAGGAGAGGGAAGGGGTACAAACAGTTTGGAAAAAGTAAATG  145
       ||||||||  || |||||| |||||||||||||||||||||||||||| 
seq2  -GCATTTAAGAGA-AGGGAAAGGGTACAAACAGTTTGGAAAAAGTAAAT-  144

seq1  GCAAATGACGTAATCACAATTCCAAAGAAATGGTAAACATTAAAGAAAAG  195
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGACGT-ATCACAATTCCAAAGAAATGGTAAACATTAAAGAAAAG  193

seq1  GCACCTTCTTATTTATCACTCTTCCTTCTGATACTTATGATATAGCAAGT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTTCTTATTTATCACTCTTCCTTCTGATACTTATGATATAGCAAGT  243

seq1  TAGCTAGGTCCGTCCCTTTCTCTCCACATAGGATGAAACTAGATAAGGAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAGGTCCGTCCCTTTCTCTCCACATAGGATGAAACTAGATAAGGAT  293

seq1  CCACTTTCATATCAATACTATGTAAGAATGATACTTACCTTTTACTAAGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTCATATCAATACTATGTAAGAATGATACTTACCTTTTACTAAGT  343

seq1  TTGAGTTAGAGCTATCCAAAACATGACTGAGACAACTAAAATTCAGCAAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTAGAGCTATCCAAAACATGACTGAGACAACTAAAATTCAGCAAA  393

seq1  GACAAGTTTATCAATAGCATCAAAAATTCGGAAATGTAGAAATGTATACA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGTTTATCAATAGCATCAAAAATTCGGAAATGTAGAAATGTATACA  443

seq1  TAGACACCGTATTTTAGAATATTGCTTTTTTTAGTTAC-AAAAACATATC  494
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAGACACCGTATTTTAGAATATTGCTTTTTTTAGTTACAAAAAACATATC  493

seq1  AGTCTATATGGTGTTTTTGTTTATGCATATTGTTTTATTCAAAGAACACT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATATGGTGTTTTTGTTTATGCATATTGTTTTATTCAAAGAACACT  543

seq1  AAAGGATTTAAATCCAAGTGACTTCACATGGACTGAGAGCTGACTGAAGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATTTAAATCCAAGTGACTTCACATGGACTGAGAGCTGACTGAAGT  593

seq1  TACAAATGGGAGGTATCTGTCCATAGCTTGATTCAAGGGTAAAATATATT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATGGGAGGTATCTGTCCATAGCTTGATTCAAGGGTAAAATATATT  643

seq1  ACCTTTATGCCACCCTGTAGGCCAGGCAAATCACAGGTGAGTGGAGACTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTATGCCACCCTGTAGGCCAGGCAAATCACAGGTGAGTGGAGACTC  693

seq1  CTCTGAGCACCATGTTTCCTTGATGTGTTCCTCACTCTAGAGAAGTGGAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGCACCATGTTTCCTTGATGTGTTCCTCACTCTAGAGAAGTGGAA  743

seq1  GTGTTGTCTCAAAAGTCAAAGGCATCTTATTTTAGGGTTACAGTGCTGGA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTCTCAAAAGTCAAAGGCATCTTATTTTAGGGTTACAGTGCTGGA  793

seq1  CCATGGGGGAGCAACTTGAAATTTCATTACAGGTAGAAAAAAGATGAGCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGGGGAGCAACTTGAAATTTCATTACAGGTAGAAAAAAGATGAGCT  843

seq1  CTCTCAGTGTGAGGGATTGGTAAATGAAAGTACTTTGTTACTGTCAGAAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGTGTGAGGGATTGGTAAATGAAAGTACTTTGTTACTGTCAGAAT  893

seq1  TAATACATGGATAAAAATCTGTGTTTTCCAGGCTCTTACAACATTTTTTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACATGGATAAAAATCTGTGTTTTCCAGGCTCTTACAACATTTTTTG  943

seq1  TATGCTTTCTTTATTTTTAAAAGTAGTTTTTATGTTATTTTTGCACTATT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTTCTTTATTTTTAAAAGTAGTTTTTATGTTATTTTTGCACTATT  993

seq1  AACATTTTACACTTATGACATTTCTGCCCCTCACTGCCGACACCAAACAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTACACTTATGACATTTCTGCCCCTCACTGCCGACACCAAACAA  1043

seq1  TAGAATTGCTTCAATTAAGAAATAGAACATCAGCCTCTGGCATCTTATTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGCTTCAATTAAGAAATAGAACATCAGCCTCTGGCATCTTATTC  1093

seq1  TGTTGTTCCATCTATTTGCTAGGGAGAATTC  1125
      |||||||||||||||||||||||||||||||
seq2  TGTTGTTCCATCTATTTGCTAGGGAGAATTC  1124