BAC Information

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BAC

Clone NameB6Ng01-162J10
Chromosome15 (Build37)
Map Location 90,919,320 - 91,076,185
singlet/doubletdoublet
Overlap geneEG635871, Abcd2, LOC545126
Upstream geneAlg10b, Cpne8, EG627342, LOC100042462, LOC100042471, EG667682, Tcea1-ps1, Spn-ps, Kif21a
Downstream geneSlc2a13, Lrrk2, Muc19, Smgc, LOC100042529, Cntn1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162J10.bB6Ng01-162J10.g
ACCDH955391DH955392
length1,1501,049
definitionDH955391|Mus musculus domesticus DNA, BAC clone: B6Ng01-162J10, 5' end.DH955392|Mus musculus domesticus DNA, BAC clone: B6Ng01-162J10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,074,863 - 91,076,185)(90,919,320 - 90,920,380)
sequence
gaattcttctccattatttgcataaatctgttgcactaatggtttttcca
tagcaaaatctggctgtcttctttcatacaggcttctgcaatcttcaccc
ataatcatggatcttttagtaaggaaatcaccagtttctgaactttggaa
taaataaaaatataattagcaggaaaggtttgatcattttcatttagaaa
caaatttaaacactaacttaaatttaaaactttgaagaacatattgaaca
atgacaagtattttcctaaattacattttaaacttaatatttaagtaaat
attactgctctggatggaagtacatctaatatagtcttctaataataggt
ataaaaataatttatacatgattctgtatttccatgtgaaatttagtgca
tagttttagctatcgttatattaacaaacaaagcatgacacccaatagtc
tgtccttacatacagtccacaaatgacctagggtaccactgtatgccact
gctgtttagtcaaacaaacaaagagatcttgaagactgtggggggaaagc
tctatgtaaaaatagttttaaggagtcataaatcagttcaagaagtagaa
aatatcaaggatattttacaatttaataattgaaatagttacaaagttct
caatgaaggtaaacaaagatataaatatttatttgaaagatacagcgacc
agatgaaaactaattaggtgaactgagtagcctataagttcattccctga
gcaaaaactggaaactttgggttaagtctaacttgtgtgtaagaatcaag
gcggatggaaaacgttaacaacaaaaatctcttttattccgttgccagtg
actgtactcacttgagatcgggccatttcagcgactggaagtataaagaa
tcttttgaaaaaaccacaagaactttttaatttttgtttttcctctaatt
atgcatatttctgtatgtatatgggggtggtacgtgctgagtgcagctgt
ccacagaacaacagtgtcgagtcccttgctgaagttacaggtgggtttag
ttgctgatgtgggttaggaccacacctgcatctctttgaagaacaggtgg
tgctctaaggtgctgagccatttcctcagctttaattttggatttctaaa

gaattcttgcctagaaatcactgtttcttgagcattgcctacccattagc
atcccttgggagtttttaacacattctttctggatgggtgggctcagatg
acctcagttgagttttgcaggtaggactcaaaaatattttgttggttttg
tttttgagataatggcctgctttgtagctcatgacccttctgccttaacg
ctttggatactgggattgcaaatgtgtgctgtccacccttgttacctgct
acatctaccagggaggagtgcatctcaaaaagcaacagttaggagcaagc
cctttaaacaggatttctagttgttgaaatgtgataaataccttgaggtc
tactgagtggttcctggactaacaacaagtaataggccttagagccagaa
aaccgactttcgctctgtccactcttcttccctttctgattcccctccac
tttgctcccaacaattgctctttattttagtttttccaggagtacccggc
atccaccctctggtgtcattagcttaaataatcagcaagataggacctgc
ggtgctaagccacacctaaggttgtgttgtgagcaacctcttggagtggt
agcaacctaaacgttttcaagcttcatgccacagtgccgtgccctccatc
tttaagaatttcataacaagtaaatccaatacatgcaagttgtgaatgct
tcccctgtggttagcgcctgacccgaaagtcacccttcccctatctattg
aagcgatgaatggctaatgtacttgactaggcatgccctgggatgggtgc
taactacagggtgaattttcaaattaataacaaaaaaacaattgttctgc
cctctttagaaccgagcagggggaaaaacaaaaccaaagcctttattcag
ctgtaactgtaaacacaaaggagtagccctctttatgcagtagctaacac
acagtatgggccacaaattgcagaaagcatgatgtggtatttcatagttc
tgatattggtggtgaggaaacacatgctaatcaagcaaggaataaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_91074863_91076185
seq2: B6Ng01-162J10.b_46_1195 (reverse)

seq1  TTTAGAAATCACGAGGAATCTATGAACATTTATGAACAACGAATTTTCTG  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTTAATTATAAACAATTCTCTCTCTCTATTCCAACCTAGTTTCTCTCTCT  100
                                                        
seq2  --------------------------------------------------  0

seq1  ATCCCATGATCTAGTTCCTAAAACATAGTCTTTTGATTTAAATATTAAGT  150
                                                        
seq2  --------------------------------------------------  0

seq1  AAGTTGAATGCCAAATTAGAAATCAAAAATTTAAAGCTGAAGAAATGGCT  200
                     ||||||||| |||| |||||||||| |||||||||
seq2  --------------TTTAGAAATCCAAAA-TTAAAGCTGAGGAAATGGCT  35

seq1  CAGCACTTAAGAGCACACACTGCTCTCACAGGAGATGCAGGTGTGGTTCC  250
      |||||| | |||||||   ||| |||   | ||||||||||||||| |||
seq2  CAGCACCTTAGAGCACCACCTGTTCTTCAAAGAGATGCAGGTGTGG-TCC  84

seq1  TAACCCACATCAAGCAACTAAAACCCACCTGTAACTTCAGCCAAGGGACT  300
      ||||||||||| ||||||| |||||||||||||||||||| |||||||||
seq2  TAACCCACATC-AGCAACT-AAACCCACCTGTAACTTCAG-CAAGGGACT  131

seq1  CGACACTGTTTGGTTCTGTGGACAGCTGCACTCAGCACGTACCACCCCCA  350
      ||||||||||  ||||||||||||||||||||||||||||||||||||||
seq2  CGACACTGTT--GTTCTGTGGACAGCTGCACTCAGCACGTACCACCCCCA  179

seq1  TATACATACAGAAATATGCATAATTAAGAGGAAAAACAAAAATTAAAAAG  400
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TATACATACAGAAATATGCATAATT-AGAGGAAAAACAAAAATTAAAAAG  228

seq1  TTCTTGTGGTTTTTTTCAAAAGATTCTTTATACTTCCAGTCGCTGAAATG  450
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGG-TTTTTTCAAAAGATTCTTTATACTTCCAGTCGCTGAAATG  277

seq1  GCCCGATCTCAAGTGAGTACAGTCACTGGCAACGGAATAAAAGAGATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGATCTCAAGTGAGTACAGTCACTGGCAACGGAATAAAAGAGATTTT  327

seq1  TGTTGTTAACGTTTTCCATCCGCCTTGATTCTTACACACAAGTTAGACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTAACGTTTTCCATCCGCCTTGATTCTTACACACAAGTTAGACTT  377

seq1  AACCCAAAGTTTCCAGTTTTTGCTCAGGGAATGAACTTATAGGCTACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAAGTTTCCAGTTTTTGCTCAGGGAATGAACTTATAGGCTACTCA  427

seq1  GTTCACCTAATTAGTTTTCATCTGGTCGCTGTATCTTTCAAATAAATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACCTAATTAGTTTTCATCTGGTCGCTGTATCTTTCAAATAAATATT  477

seq1  TATATCTTTGTTTACCTTCATTGAGAACTTTGTAACTATTTCAATTATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTTTGTTTACCTTCATTGAGAACTTTGTAACTATTTCAATTATTA  527

seq1  AATTGTAAAATATCCTTGATATTTTCTACTTCTTGAACTGATTTATGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAAAATATCCTTGATATTTTCTACTTCTTGAACTGATTTATGACT  577

seq1  CCTTAAAACTATTTTTACATAGAGCTTTCCCCCCACAGTCTTCAAGATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAACTATTTTTACATAGAGCTTTCCCCCCACAGTCTTCAAGATCT  627

seq1  CTTTGTTTGTTTGACTAAACAGCAGTGGCATACAGTGGTACCCTAGGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTGTTTGACTAAACAGCAGTGGCATACAGTGGTACCCTAGGTCA  677

seq1  TTTGTGGACTGTATGTAAGGACAGACTATTGGGTGTCATGCTTTGTTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGACTGTATGTAAGGACAGACTATTGGGTGTCATGCTTTGTTTGT  727

seq1  TAATATAACGATAGCTAAAACTATGCACTAAATTTCACATGGAAATACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAACGATAGCTAAAACTATGCACTAAATTTCACATGGAAATACAG  777

seq1  AATCATGTATAAATTATTTTTATACCTATTATTAGAAGACTATATTAGAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGTATAAATTATTTTTATACCTATTATTAGAAGACTATATTAGAT  827

seq1  GTACTTCCATCCAGAGCAGTAATATTTACTTAAATATTAAGTTTAAAATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTCCATCCAGAGCAGTAATATTTACTTAAATATTAAGTTTAAAATG  877

seq1  TAATTTAGGAAAATACTTGTCATTGTTCAATATGTTCTTCAAAGTTTTAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAGGAAAATACTTGTCATTGTTCAATATGTTCTTCAAAGTTTTAA  927

seq1  ATTTAAGTTAGTGTTTAAATTTGTTTCTAAATGAAAATGATCAAACCTTT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGTTAGTGTTTAAATTTGTTTCTAAATGAAAATGATCAAACCTTT  977

seq1  CCTGCTAATTATATTTTTATTTATTCCAAAGTTCAGAAACTGGTGATTTC  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTAATTATATTTTTATTTATTCCAAAGTTCAGAAACTGGTGATTTC  1027

seq1  CTTACTAAAAGATCCATGATTATGGGTGAAGATTGCAGAAGCCTGTATGA  1250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTAAAAGATCCATGATTATGGGTGAAGATTGCAGAAGCCTGTATGA  1077

seq1  AAGAAGACAGCCAGATTTTGCTATGGAAAAACCATTAGTGCAACAGATTT  1300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGACAGCCAGATTTTGCTATGGAAAAACCATTAGTGCAACAGATTT  1127

seq1  ATGCAAATAATGGAGAAGAATTC  1323
      |||||||||||||||||||||||
seq2  ATGCAAATAATGGAGAAGAATTC  1150

seq1: chr15_90919320_90920380
seq2: B6Ng01-162J10.g_67_1115

seq1  GAATTCTTGCCTAGAAATCACTGTTTCTTGAGCATTGCCTACCCATTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCCTAGAAATCACTGTTTCTTGAGCATTGCCTACCCATTAGC  50

seq1  ATCCCTTGGGAGTTTTTAACACATTCTTTCTGGATGGGTGGGCTCAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTGGGAGTTTTTAACACATTCTTTCTGGATGGGTGGGCTCAGATG  100

seq1  ACCTCAGTTGAGTTTTGCAGGTAGGACTCAAAAATATTTTGTTGGTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGTTGAGTTTTGCAGGTAGGACTCAAAAATATTTTGTTGGTTTTG  150

seq1  TTTTTGAGATAATGGCCTGCTTTGTAGCTCATGACCCTTCTGCCTTAACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGATAATGGCCTGCTTTGTAGCTCATGACCCTTCTGCCTTAACG  200

seq1  CTTTGGATACTGGGATTGCAAATGTGTGCTGTCCACCCTTGTTACCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGATACTGGGATTGCAAATGTGTGCTGTCCACCCTTGTTACCTGCT  250

seq1  ACATCTACCAGGGAGGAGTGCATCTCAAAAAGCAACAGTTAGGAGCAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTACCAGGGAGGAGTGCATCTCAAAAAGCAACAGTTAGGAGCAAGC  300

seq1  CCTTTAAACAGGATTTCTAGTTGTTGAAATGTGATAAATACCTTGAGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAACAGGATTTCTAGTTGTTGAAATGTGATAAATACCTTGAGGTC  350

seq1  TACTGAGTGGTTCCTGGACTAACAACAAGTAATAGGCCTTAGAGCCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGTGGTTCCTGGACTAACAACAAGTAATAGGCCTTAGAGCCAGAA  400

seq1  AACCGACTTTCGCTCTGTCCACTCTTCTTCCCTTTCTGATTCCCCTCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGACTTTCGCTCTGTCCACTCTTCTTCCCTTTCTGATTCCCCTCCAC  450

seq1  TTTGCTCCCAACAATTGCTCTTTATTTTAGTTTTTCCAGGAGTACCCGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCCCAACAATTGCTCTTTATTTTAGTTTTTCCAGGAGTACCCGGC  500

seq1  ATCCACCCTCTGGTGTCATTAGCTTAAATAATCAGCAAGATAGGACCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCCTCTGGTGTCATTAGCTTAAATAATCAGCAAGATAGGACCTGC  550

seq1  GGTGCTAAGCCACACCTAAGGTTGTGTTGTGAGCAACCTCTTGGAGTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTAAGCCACACCTAAGGTTGTGTTGTGAGCAACCTCTTGGAGTGGT  600

seq1  AGCAACCTAAACGTTTTCAAGCTTCATGCCACAGTGCCGTGCCCTCCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCTAAACGTTTTCAAGCTTCATGCCACAGTGCCGTGCCCTCCATC  650

seq1  TTTAAGAATTTCATAACAAGTAAATCCAATACATGCAAGTTGTGAATGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAATTTCATAACAAGTAAATCCAATACATGCAAGTTGTGAATGCT  700

seq1  TCCCCTGTGGTTAGCGCCTGACCCGAAAGTCACCCTTCCCCTATCTATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGTGGTTAGCGCCTGACCCGAAAGTCACCCTTCCCCTATCTATTG  750

seq1  AAGCGATGAATGGCTAATGTACTTGACTAGGCATGCCCTGGGATGGGTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGATGAATGGCTAATGTACTTGACTAGGCATGCCCTGGGATGGGTGC  800

seq1  TAACTACAGGGTGAATTTTCAAATTAATAACAAAAAAACAATTGTTCTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTACAGGGTGAATTTTCAAATTAATAACAAAAAAACAATTGTTCTGC  850

seq1  CCTCTTAAGAACCGAGCAGGGGGAAAAAACAAAACCAAAGCCTTTATTCA  900
      |||||| |||||||||||||||| ||||||||||||||||||||||||||
seq2  CCTCTTTAGAACCGAGCAGGGGG-AAAAACAAAACCAAAGCCTTTATTCA  899

seq1  GCTGTAACTTGTAAACACAAAGGAGTAAGCCCTCTTTATGCAGTAGCTAA  950
      |||||||| ||||||||||||||||| |||||||||||||||||||||||
seq2  GCTGTAAC-TGTAAACACAAAGGAGT-AGCCCTCTTTATGCAGTAGCTAA  947

seq1  CACCACAGTTATGGGCCACAAAATTGCAGGAAAGCATGATGTTGGTATTT  1000
      || ||||| |||||||||| |||||||| |||||||||||| ||||||||
seq2  CA-CACAG-TATGGGCCAC-AAATTGCA-GAAAGCATGATG-TGGTATTT  992

seq1  CATTAGTTCTGATATTGGTGTGAAGGGAAAACACATGCAAATCAAAGCAA  1050
      || |||||||||||||||||   |||  |||||||||| |||| ||||||
seq2  CA-TAGTTCTGATATTGGTGGTGAGG--AAACACATGCTAATC-AAGCAA  1038

seq1  GGAATAAATGA  1061
      |||||||||||
seq2  GGAATAAATGA  1049