BAC Information

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BAC

Clone NameB6Ng01-164P13
Chromosome15 (Build37)
Map Location 58,353,169 - 58,354,246
singlet/doubletsinglet
Overlap geneEG631797
Upstream geneZhx2, Derl1, Wdr67, BC030396, 9130401M01Rik, Zhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32, 8230402K04Rik, Anxa13, LOC100040231, D15Ertd621e
Downstream geneTmem65, EG546638, Trmt12, Rnf139, Tatdn1, Ndufb9, Mtss1, LOC100040330, EG268809, LOC665565, Sqle, E430025E21Rik, Nsmce2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164P13.bB6Ng01-164P13.g
ACCDH957155DH957156
length1,1631,075
definitionDH957155|Mus musculus domesticus DNA, BAC clone: B6Ng01-164P13, 5' end.DH957156|Mus musculus domesticus DNA, BAC clone: B6Ng01-164P13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgaaatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaacgggatcttcaaccc
tataggtggacacatatgactaaccagtacccctgagctcttggactcta
gctgcatatgtatcaaaagatggctagtcgccatcactggtaagaaggcc
catgacacccgactttgtgtccgtacaggtactccatgccaaggggggga
atgggtgggtatg
gaattcttttcacttgaaaacctccccaaccctattccattcatcaagaa
cagacacaggctggcataaaagttgcagtagaatggcgggcgggactctt
ggacttcactctgagtttgatctgagtttgaccttgatgcttcggggcta
atctggtgtgtagtctatctactaagtgaaatagctgaactgaatgacca
agctttctccagcatagtcttcattattgaaggtcttagtgtctgatctc
caatatttattgaatgcttgatgtcggaggcaagaagaatggaataagtg
gtgtttctctcttctaggagctttcggcatgcgtggctagacaccaagag
tggcggtgatggtgatgggtctgaacaccttctcagttgatcagcatgct
tcagcacaagcaatttcaacatccactgctcactttataccaataattgg
attgcagcatggtattattttatagaaagacgtgcctgcttgccaatttc
agtgatagttcccttgggttgggtagcataaggatgctttgggtttaggt
tgcacaggaaaacaatgcacaggccaccttccatggtggaattttgttca
atggatatgctaaatactagcactaaagtataaagtataaagtataaagt
ataaagtttaagagataaggatttagaatagtgtcttgactttatcacct
aaagctgattgagtctggacaagtagcttgaatgcttatctatctatcat
ctatctatctatctatctatctatctatcgatctatctatcatctatcat
ctaactatcatctatctatcatacatatatcaatctatcatttatcaatt
atctatcatctaactatcatctacctatcatctatcatctaactatcatc
tctctgtcatctaactatcatctatctatcatacatatatcaatctatca
tttatcaattatctatcatctaactatcatctatctatcatctatcatct
aactatcatctctctggcatctaactatcatctatctatcgtcttctatc
tatttgctatcacttatcaattatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_58353169_58354246
seq2: B6Ng01-164P13.g_69_1143

seq1  GAATTCTTTTCACTTGAAAACCTCCCCAACCCTATTCCATTCATCAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCACTTGAAAACCTCCCCAACCCTATTCCATTCATCAAGAA  50

seq1  CAGACACAGGCTGGCATAAAAGTTGCAGTAGAATGGCGGGCGGGACTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACAGGCTGGCATAAAAGTTGCAGTAGAATGGCGGGCGGGACTCTT  100

seq1  GGACTTCACTCTGAGTTTGATCTGAGTTTGACCTTGATGCTTCGGGGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCACTCTGAGTTTGATCTGAGTTTGACCTTGATGCTTCGGGGCTA  150

seq1  ATCTGGTGTGTAGTCTATCTACTAAGTGAAATAGCTGAACTGAATGACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTGTGTAGTCTATCTACTAAGTGAAATAGCTGAACTGAATGACCA  200

seq1  AGCTTTCTCCAGCATAGTCTTCATTATTGAAGGTCTTAGTGTCTGATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCTCCAGCATAGTCTTCATTATTGAAGGTCTTAGTGTCTGATCTC  250

seq1  CAATATTTATTGAATGCTTGATGTCGGAGGCAAGAAGAATGGAATAAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTTATTGAATGCTTGATGTCGGAGGCAAGAAGAATGGAATAAGTG  300

seq1  GTGTTTCTCTCTTCTAGGAGCTTTCGGCATGCGTGGCTAGACACCAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCTCTCTTCTAGGAGCTTTCGGCATGCGTGGCTAGACACCAAGAG  350

seq1  TGGCGGTGATGGTGATGGGTCTGAACACCTTCTCAGTTGATCAGCATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGGTGATGGTGATGGGTCTGAACACCTTCTCAGTTGATCAGCATGCT  400

seq1  TCAGCACAAGCAATTTCAACATCCACTGCTCACTTTATACCAATAATTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACAAGCAATTTCAACATCCACTGCTCACTTTATACCAATAATTGG  450

seq1  ATTGCAGCATGGTATTATTTTATAGAAAGACGTGCCTGCTTGCCAATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAGCATGGTATTATTTTATAGAAAGACGTGCCTGCTTGCCAATTTC  500

seq1  AGTGATAGTTCCCTTGGGTTGGGTAGCATAAGGATGCTTTGGGTTTAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATAGTTCCCTTGGGTTGGGTAGCATAAGGATGCTTTGGGTTTAGGT  550

seq1  TGCACAGGAAAACAATGCACAGGCCACCTTCCATGGTGGAATTTTGTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGGAAAACAATGCACAGGCCACCTTCCATGGTGGAATTTTGTTCA  600

seq1  ATGGATATGCTAAATACTAGCACTAAAGTATAAAGTATAAAGTATAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATATGCTAAATACTAGCACTAAAGTATAAAGTATAAAGTATAAAGT  650

seq1  ATAAAGTTTAAGAGATAAGGATTTAGAATAGTGTCTTGACTTTATCACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTTTAAGAGATAAGGATTTAGAATAGTGTCTTGACTTTATCACCT  700

seq1  AAAGCTGATTGAGTCTGGACAAGTAGCTTGAATGCTTATCTATCTATCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGATTGAGTCTGGACAAGTAGCTTGAATGCTTATCTATCTATCAT  750

seq1  CTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATCTATCAT  800
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTATCTATCTATCTATCTATCTATCTATCGATCTATCTATCATCTATCAT  800

seq1  CTAACTATCATCTATCTATCATACATATATCAATCTATCATTTATCAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTATCATCTATCTATCATACATATATCAATCTATCATTTATCAATT  850

seq1  ATCTATCATCTAACTATCATCTACCTATCATCTATCATCTAACTATCATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCATCTAACTATCATCTACCTATCATCTATCATCTAACTATCATC  900

seq1  TCTCTGTCATCTAACTATCATCTATCTATCATACATATATCAATCTATCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCATCTAACTATCATCTATCTATCATACATATATCAATCTATCA  950

seq1  TTTATCAATTATCTATCATCTAACTATCATCTATCTATCATCTATCATCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAATTATCTATCATCTAACTATCATCTATCTATCATCTATCATCT  1000

seq1  AACTATCATCTCTCTGTCATCTAACTATCATCTATCTATCTATCTATCTA  1050
      |||||||||||||||| |||||||||||||||||||||||  ||| ||||
seq2  AACTATCATCTCTCTGGCATCTAACTATCATCTATCTATC-GTCT-TCTA  1048

seq1  TCTATCTATCTATCACTTATCAATTATC  1078
      ||||| |  |||||||||||||||||||
seq2  TCTAT-TTGCTATCACTTATCAATTATC  1075