BAC Information

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BAC

Clone NameB6Ng01-167P07
Chromosome15 (Build37)
Map Location 67,225,621 - 67,226,880
singlet/doubletsinglet
Overlap genenone
Upstream geneLrrc6, Tmem71, LOC100040881, Phf20l1, Tg, Sla, Wisp1, Ndrg1, LOC100040667, St3gal1
Downstream geneZfat1, LOC100041000
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167P07.bB6Ng01-167P07.g
ACCDH959321DH959322
length1,2331,214
definitionDH959321|Mus musculus domesticus DNA, BAC clone: B6Ng01-167P07, 5' end.DH959322|Mus musculus domesticus DNA, BAC clone: B6Ng01-167P07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgcctaagatgaacaacatcctaggtttgatcccaagaaccac
attaaactgagtatggtggcacatacactaatcctagcatctaggaagtg
gagatgagaggatcagaggttcaaggttacagctacatagtgagttagat
gacattctgagttagatcctttataaagcaacaaaatttttaaaagaaag
aaaaataagaaaaaaaaaggaaaaaaagaaaaatatgtttgatgctcctg
taactggttgtggaactctttgctggaggaaaaatattgagccatagttc
tcatggcaatctatctgttttgtattctcttattccttttcttatttacg
tgttcctggtagcctaggccaagatcttaagtgataataatgggtaagaa
accatccctagagatggggtcactaacatgaccttatccccagggaaacc
aatgctttactttctaaatcatttataaaactattatgataaaaactttc
ccaacaataaaatttcatatggctacaggtgtgtcatcgaaggcagattt
tggtatatggtaaagaaagccttaattagaaagaattgaaatagtttaaa
tttatacattgaagattataaaaaatcaggcactagatgttaaataataa
ttgaccatagggctggaaagttagttcagtggttaagagcactgactatt
aaagatttattaacctgctcctggaaatatgccactagccttggatgaca
acccccactgaatacatccttttagaattgctatattttgatgatttata
ataatgttacctgttctgtttgtgattcactaaatatatagtttcagagt
tgtaatgattggatgatttttgtgctttacagtgccaaatgatttttgtt
ggtatctgtgattgtttcattggatatagtttctaagagatgtaatgttt
gggtttttaatgtataaaacccctgcttgatagctgcagaatacactcag
attcaactgctctgttgtttctgtcactgcaaattcttaccaactaggtt
tcagaccctcattcaggatcccataacccactcagttggttcatggcatt
tatatttccccatggccagcggatggagacttacggtaatatttaccttt
cactgccaagtcctcactgccatgcccagtctcatggcacttggatcagg
gcgactgggtgtctataggaccagatgtggctc
gaattcatctcaagctcatggggtagctagcctgggagacacaaagcaga
aacaacatgagaatacctgtttcacaaacaaggcagaaggagggaactga
ctcctcaaaattgtccattcatctccacatgtgtgcagtagcacacacac
acacacacacacacacacacacacacacacacacaccacaaatttaaaac
attataagtgacataacccaaacccaataaagacaaatggcacaagtttt
ctcttttatgtggatgctatctttgaatctttagacgtgtttaaattgga
gtacactcagaagtcagggtgctagaaagggccatagagtctgggtgact
caggagaaggaacttagactcagcttgcatgatagagaaataatggaaca
gacagggataaattggtggataacaggaaggcagggaagaggaaggagta
taagaaggcataactaacactgaatgcctttgaagaagctatgaggaaac
ctactaatgtagaagctttctaaaatatagacacataagagaagtttcaa
tagaattaccctgtaacagagaaataaatgcctcaaccaggcaccataga
ctagcaaataaaaagcctagtactgggtatgtgtcacttcttttggaggt
gttggtgattggggttccatagactgccccatcaaacactacaggatatt
gccattgctctgtgctgctatctataacatatgagaatgtattgctcaca
gcatcatcatatacttgaatcataggacataggaaaatcaggctggtaac
aacttataagcttcatttctccaggctaccttcaaggtgctggaattact
atacacattatccagaggaaaaaagtcattaacatcttatccaaccgtga
accctgtgaattataacaacaactgtcctagcaatatctaccgatgctac
aatagtgacatgaatgtataggagcaaccaacacatttgccttaatttaa
agttctcccataagacaaaactcatgctggcatgtaactgggtcagaacc
atgactacttgatcatatactctcagagagagcaatactacgatctgtaa
atgaatagtatgactgtacttaagtctatatggacaataattaggtgacc
ctcacctatggaggctcttctaaggatgccattaacagacccacactggt
ccagatggcaggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_67225621_67226880
seq2: B6Ng01-167P07.b_47_1279

seq1  GAATTCTTGCCTAAGATGAACAACATCCTAGGTTTGATCCCAAGAACCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCCTAAGATGAACAACATCCTAGGTTTGATCCCAAGAACCAC  50

seq1  ATTAAACTGAGTATGGTGGCACATACACTAATCCTAGCATCTAGGAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACTGAGTATGGTGGCACATACACTAATCCTAGCATCTAGGAAGTG  100

seq1  GAGATGAGAGGATCAGAGGTTCAAGGTTACAGCTACATAGTGAGTTAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAGAGGATCAGAGGTTCAAGGTTACAGCTACATAGTGAGTTAGAT  150

seq1  GACATTCTGAGTTAGATCCTTTATAAAGCAACAAAATTTTTAAAAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCTGAGTTAGATCCTTTATAAAGCAACAAAATTTTTAAAAGAAAG  200

seq1  AAAAATAAGAAAAAAAAAGGAAAAAAAGAAAAATATGTTTGATGCTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAGAAAAAAAAAGGAAAAAAAGAAAAATATGTTTGATGCTCCTG  250

seq1  TAACTGGTTGTGGAACTCTTTGCTGGAGGAAAAATATTGAGCCATAGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGTTGTGGAACTCTTTGCTGGAGGAAAAATATTGAGCCATAGTTC  300

seq1  TCATGGCAATCTATCTGTTTTGTATTCTCTTATTCCTTTTCTTATTTACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCAATCTATCTGTTTTGTATTCTCTTATTCCTTTTCTTATTTACG  350

seq1  TGTTCCTGGTAGCCTAGGCCAAGATCTTAAGTGATAATAATGGGTAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTGGTAGCCTAGGCCAAGATCTTAAGTGATAATAATGGGTAAGAA  400

seq1  ACCATCCCTAGAGATGGGGTCACTAACATGACCTTATCCCCAGGGAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCCTAGAGATGGGGTCACTAACATGACCTTATCCCCAGGGAAACC  450

seq1  AATGCTTTACTTTCTAAATCATTTATAAAACTATTATGATAAAAACTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTTACTTTCTAAATCATTTATAAAACTATTATGATAAAAACTTTC  500

seq1  CCAACAATAAAATTTCATATGGCTACAGGTGTGTCATCGAAGGCAGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAATAAAATTTCATATGGCTACAGGTGTGTCATCGAAGGCAGATTT  550

seq1  TGGTATATGGTAAAGAAAGCCTTAATTAGAAAGAATTGAAATAGTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATATGGTAAAGAAAGCCTTAATTAGAAAGAATTGAAATAGTTTAAA  600

seq1  TTTATACATTGAAGATTATAAAAAATCAGGCACTAGATGTTAAATAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACATTGAAGATTATAAAAAATCAGGCACTAGATGTTAAATAATAA  650

seq1  TTGACCATAGGGCTGGAAAGTTAGTTCAGTGGTTAAGAGCACTGACTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCATAGGGCTGGAAAGTTAGTTCAGTGGTTAAGAGCACTGACTATT  700

seq1  AAAGATTTATTAACCTGCTCCTGGAAATATGCCACTAGCCTTGGATGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTTATTAACCTGCTCCTGGAAATATGCCACTAGCCTTGGATGACA  750

seq1  ACCCCCACTGAATACATCCTTTTAGAATTGCTATATTTTGATGATTTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCACTGAATACATCCTTTTAGAATTGCTATATTTTGATGATTTATA  800

seq1  ATAATGTTACCTGTTCTGTTTGTGATTCACTAAATATATAGTTTCAGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTTACCTGTTCTGTTTGTGATTCACTAAATATATAGTTTCAGAGT  850

seq1  TGTAATGATTGGATGATTTTTGTGCTTTACAGTGCCAAATGATTTTTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGATTGGATGATTTTTGTGCTTTACAGTGCCAAATGATTTTTGTT  900

seq1  GGTATCTGTGATTGTTTCATTGGATATAGTTTCTAAGAGATGTAATGTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCTGTGATTGTTTCATTGGATATAGTTTCTAAGAGATGTAATGTTT  950

seq1  GGTTTTTTAATGTATAAAAACCCCTGCTTGATAGCTGCAGAATACACTCA  1000
      || |||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGGTTTTTAATGTAT-AAAACCCCTGCTTGATAGCTGCAGAATACACTCA  999

seq1  GATTCAAACTGCCTCTGTTTGTTTCTGTCACTGCCAAATCCTTACCCACC  1050
      ||||| ||||| ||||| ||||||||||||||| ||||| |||||| || 
seq2  GATTC-AACTG-CTCTG-TTGTTTCTGTCACTG-CAAATTCTTACCAACT  1045

seq1  TAGTTTCAAGGACCCTCATTCCAGGGAATCCCATACCCAACTCAGGTGGT  1100
        ||||||  |||||||||| ||||  |||||||| || |||||| ||||
seq2  AGGTTTCA--GACCCTCATT-CAGG--ATCCCATAACCCACTCAGTTGGT  1090

seq1  CCATGGCATTTATA-TTCCCCATGGCCAGCAGAAAGGAGACTAACCAGTA  1149
       ||||||||||||| ||||||||||||||| | | ||||||| | | |||
seq2  TCATGGCATTTATATTTCCCCATGGCCAGC-GGATGGAGACTTA-CGGTA  1138

seq1  ATATTTACTTTCAACTGCACAGTTCACTCACTGCATGGCTCAGTTCCTCC  1199
      |||||||| ||  |||||  |||   ||||||||   || ||||  ||| 
seq2  ATATTTACCTTTCACTGCCAAGT--CCTCACTGCCATGCCCAGT--CTC-  1183

seq1  ATTTGCAACTTGTGATCAGTGGCCCAGACCTTGTGAGTCATATGAGGACC  1249
         ||  ||||| |||||| |||   |||  || | ||| ||| ||||||
seq2  --ATGGCACTTG-GATCAG-GGC---GAC--TGGGTGTC-TAT-AGGACC  1222

seq1  AGAGATGGCTC  1260
      |||  ||||||
seq2  AGATGTGGCTC  1233