BAC Information

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BAC

Clone NameB6Ng01-169K10
Chromosome15 (Build37)
Map Location 79,007,039 - 79,098,059
singlet/doubletdoublet
Overlap geneLOC100041655, Pick1, Slc16a8, Baiap2l2
Upstream genePvalb, Ncf4, Csf2rb2, Csf2rb1, 1700061J05Rik, Tst, Mpst, Kctd17, Tmprss6, Il2rb, C1qtnf6, Sstr3, EG626952, Rac2, Pscd4, Lrrc62, Mfng, Card10, LOC641104, LOC100041601, Cdc42ep1, Lgals2, Gga1, Sh3bp1, Pdxp, Lgals1, Nol12, Triobp, H1f0, Gcat, Galr3, LOC100042603, Ankrd54, Eif3s6ip, 1700088E04Rik, Polr2f, Sox10
Downstream genePla2g6, Maff, 4732495E13Rik, Csnk1e, LOC675798, LOC100041676, Kcnj4, Kdelr3, Ddx17, Dmc1, 4933432B09Rik, Pgea1, Tomm22, Josd1, Gtpbp1, Unc84b, Dnalc4, Npcd, Nptxr, Cbx6, LOC100042748, Apobec3, Cbx7, Pdgfb, Rpl3, Syngr1, Map3k7ip1, Mgat3, EG666948, Smcr7l, Atf4, Rps19bp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169K10.bB6Ng01-169K10.g
ACCDH960572DH960573
length1,042818
definitionDH960572|Mus musculus domesticus DNA, BAC clone: B6Ng01-169K10, 5' end.DH960573|Mus musculus domesticus DNA, BAC clone: B6Ng01-169K10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,097,017 - 79,098,059)(79,007,039 - 79,007,854)
sequence
gaattcctgtaattctctgggtggtgaaagcttgcagtgtttgttagagg
aacttggtaagacagatgtaagggcagggaccaaagaggaaagttagcac
agtcccagtgattggactgccaacggggtgacccacagtctctaagcagt
caggtgtccttccaggaaatattgtctgagatagttgtttagcattttct
ctactcagattagttcacatgaaaacagcatccttctgttaggaaggtac
agaggcctccctttggcagtccttcagtggagtcctctacgattttagag
gagcactgcagccaggaaatctatgtcatttcgtagggtgatggtgctct
gttgtaccagggtcaggtcttccttcatctgataggcttggccgtgctgt
acctgttggagctctatcactgatgcccctctaggagtacaggtgtggcc
ggaggcttgtctttctcctgattttatggacaagatattgatgagtgcta
tatcctgggagaacatccaagcctagcttgaggaagactgtggcacattg
cccttcagggtggcagctgtgaagtgccctcctgacacacaaagcaagtc
ccgtttgatgccattgccatggaaaccaacgggtactatttgtttctggt
tgtatgcaacctcattgatataagctaagcaggagtcgtctattggcagg
ttagtttgcattgggctggggatgactgtccagtgctcagagactaaata
gtttgtgctcacagaaacaggaatggcgttggcccttagagacaactgtg
aagtttggagtttgccccatgagtgtacaatggttagctcccaaattatg
tcagccgtatgctccctgttcaataaataagttgactctttgtccctgtg
tgggtgcccctgcctatgcccctggactagcaatatcagtgcagtaaatg
gcagatgtgaagacgtatggagggtaaggatgagggctgggcagcagggg
atgctaatggcaggggtggtgggagcgtgtaggggagaaggt
gaattcctctgacctagctccatggtcagctcaggcatatcccactaggt
gacttcaggatcctttagttgcctgcattcgaggggagcatcagggagct
cagctcacacaggggacaaagctcatctgctgctgagacaagccttccaa
tgtcacccacagcctggcttgtggcagaggaccagcggcccccagagtca
tctgaaatgtcacagcccagggcaggccttggaggcgctccaggccacac
ttcaggttttgtgggcacatatacggaggcctggaagggcactagcttgt
cctgggttagagctgagcttggtgttgacccaggttgtctgtctccagat
tagtgttttgaaacaccccaccccccacccccatgtggagtctcaccaaa
cacagtacgcatagactgtgcatacacttggtgcaagacacctggccgtc
tgagtcagacacctcatctctggttttgtgactcagcctggctgtatcac
cctcagctggcggcttcattttcggggaaatgaaccgtaacagacagctg
ggcaggggtggcgcatgcctttaatcccagcacttgggaggcagaggcag
agaggtaggcagcctggactacagagtgagagagtgagttccaggactgc
caggcttacacagagaaaccctgtcttgaaaaccaaaaaaagaaaagaaa
agaaatgaaacttaacagacatgtaacccttggatagagccactatgtgt
gtttgtttgtttttgtttttatcttttctctttctttttctttttttggg
gtgggagtggggacaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_79097017_79098059
seq2: B6Ng01-169K10.b_48_1088 (reverse)

seq1  CCTTCTCCCCACAACGCTCCCACCACCCCTGCCAATAGCAATCCCCCTGC  50
      ||||||||||   ||||||||||||||||||||| |||||   |||||||
seq2  CCTTCTCCCCTACACGCTCCCACCACCCCTGCCATTAGCA--TCCCCTGC  48

seq1  TGCCCAGCCCTCATCCTTACCCTCCATACGTCTTCACATCTGCCATTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGCCCTCATCCTTACCCTCCATACGTCTTCACATCTGCCATTTAC  98

seq1  TGCACTGATATTGCTAGTCCAGGGGCATAGGCAGGGGCACCCACACAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGATATTGCTAGTCCAGGGGCATAGGCAGGGGCACCCACACAGGG  148

seq1  ACAAAGAGTCAACTTATTTATTGAACAGGGAGCATACGGCTGACATAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAGTCAACTTATTTATTGAACAGGGAGCATACGGCTGACATAATT  198

seq1  TGGGAGCTAACCATTGTACACTCATGGGGCAAACTCCAAACTTCACAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCTAACCATTGTACACTCATGGGGCAAACTCCAAACTTCACAGTT  248

seq1  GTCTCTAAGGGCCAACGCCATTCCTGTTTCTGTGAGCACAAACTATTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTAAGGGCCAACGCCATTCCTGTTTCTGTGAGCACAAACTATTTAG  298

seq1  TCTCTGAGCACTGGACAGTCATCCCCAGCCCAATGCAAACTAACCTGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAGCACTGGACAGTCATCCCCAGCCCAATGCAAACTAACCTGCCA  348

seq1  ATAGACGACTCCTGCTTAGCTTATATCAATGAGGTTGCATACAACCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACGACTCCTGCTTAGCTTATATCAATGAGGTTGCATACAACCAGAA  398

seq1  ACAAATAGTACCCGTTGGTTTCCATGGCAATGGCATCAAACGGGACTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAGTACCCGTTGGTTTCCATGGCAATGGCATCAAACGGGACTTGC  448

seq1  TTTGTGTGTCAGGAGGGCACTTCACAGCTGCCACCCTGAAGGGCAATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTGTCAGGAGGGCACTTCACAGCTGCCACCCTGAAGGGCAATGTG  498

seq1  CCACAGTCTTCCTCAAGCTAGGCTTGGATGTTCTCCCAGGATATAGCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTCTTCCTCAAGCTAGGCTTGGATGTTCTCCCAGGATATAGCACT  548

seq1  CATCAATATCTTGTCCATAAAATCAGGAGAAAGACAAGCCTCCGGCCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATATCTTGTCCATAAAATCAGGAGAAAGACAAGCCTCCGGCCACA  598

seq1  CCTGTACTCCTAGAGGGGCATCAGTGATAGAGCTCCAACAGGTACAGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTCCTAGAGGGGCATCAGTGATAGAGCTCCAACAGGTACAGCAC  648

seq1  GGCCAAGCCTATCAGATGAAGGAAGACCTGACCCTGGTACAACAGAGCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGCCTATCAGATGAAGGAAGACCTGACCCTGGTACAACAGAGCAC  698

seq1  CATCACCCTACGAAATGACATAGATTTCCTGGCTGCAGTGCTCCTCTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCCTACGAAATGACATAGATTTCCTGGCTGCAGTGCTCCTCTAAA  748

seq1  ATCGTAGAGGACTCCACTGAAGGACTGCCAAAGGGAGGCCTCTGTACCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTAGAGGACTCCACTGAAGGACTGCCAAAGGGAGGCCTCTGTACCTT  798

seq1  CCTAACAGAAGGATGCTGTTTTCATGTGAACTAATCTGAGTAGAGAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACAGAAGGATGCTGTTTTCATGTGAACTAATCTGAGTAGAGAAAAT  848

seq1  GCTAAACAACTATCTCAGACAATATTTCCTGGAAGGACACCTGACTGCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAACAACTATCTCAGACAATATTTCCTGGAAGGACACCTGACTGCTT  898

seq1  AGAGACTGTGGGTCACCCCGTTGGCAGTCCAATCACTGGGACTGTGCTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTGTGGGTCACCCCGTTGGCAGTCCAATCACTGGGACTGTGCTAA  948

seq1  CTTTCCTCTTTGGTCCCTGCCCTTACATCTGTCTTACCAAGTTCCTCTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCTTTGGTCCCTGCCCTTACATCTGTCTTACCAAGTTCCTCTAA  998

seq1  CAAACACTGCAAGCTTTCACCACCCAGAGAATTACAGGAATTC  1043
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACTGCAAGCTTTCACCACCCAGAGAATTACAGGAATTC  1041

seq1: chr15_79007039_79007854
seq2: B6Ng01-169K10.g_66_883

seq1  GAATTCCTCTGACCTAGCTCCATGGTCAGCTCAGGCATATCCCACTAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGACCTAGCTCCATGGTCAGCTCAGGCATATCCCACTAGGT  50

seq1  GACTTCAGGATCCTTTAGTTGCCTGCATTCGAGGGGAGCATCAGGGAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCAGGATCCTTTAGTTGCCTGCATTCGAGGGGAGCATCAGGGAGCT  100

seq1  CAGCTCACACAGGGGACAAAGCTCATCTGCTGCTGAGACAAGCCTTCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCACACAGGGGACAAAGCTCATCTGCTGCTGAGACAAGCCTTCCAA  150

seq1  TGTCACCCACAGCCTGGCTTGTGGCAGAGGACCAGCGGCCCCCAGAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACCCACAGCCTGGCTTGTGGCAGAGGACCAGCGGCCCCCAGAGTCA  200

seq1  TCTGAAATGTCACAGCCCAGGGCAGGCCTTGGAGGCGCTCCAGGCCACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAATGTCACAGCCCAGGGCAGGCCTTGGAGGCGCTCCAGGCCACAC  250

seq1  TTCAGGTTTTGTGGGCACATATACGGAGGCCTGGAAGGGCACTAGCTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTTTTGTGGGCACATATACGGAGGCCTGGAAGGGCACTAGCTTGT  300

seq1  CCTGGGTTAGAGCTGAGCTTGGTGTTGACCCAGGTTGTCTGTCTCCAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTTAGAGCTGAGCTTGGTGTTGACCCAGGTTGTCTGTCTCCAGAT  350

seq1  TAGTGTTTTGAAACACCCCACCCCCCACCCCCATGTGGAGTCTCACCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTTTGAAACACCCCACCCCCCACCCCCATGTGGAGTCTCACCAAA  400

seq1  CACAGTACGCATAGACTGTGCATACACTTGGTGCAAGACACCTGGCCGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTACGCATAGACTGTGCATACACTTGGTGCAAGACACCTGGCCGTC  450

seq1  TGAGTCAGACACCTCATCTCTGGTTTTGTGACTCAGCCTGGCTGTATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCAGACACCTCATCTCTGGTTTTGTGACTCAGCCTGGCTGTATCAC  500

seq1  CCTCAGCTGGCGGCTTCATTTTCGGGGAAATGAACCGTAACAGACAGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCTGGCGGCTTCATTTTCGGGGAAATGAACCGTAACAGACAGCTG  550

seq1  GGCAGGGGTGGCGCATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGGTGGCGCATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAG  600

seq1  AGAGGTAGGCAGCCTGGACTACAGAGTGAGAGAGTGAGTTCCAGGACTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAGGCAGCCTGGACTACAGAGTGAGAGAGTGAGTTCCAGGACTGC  650

seq1  CAGGCTTACACAGAGAAACCCTGTCTTGAAAACCAAAAAAAGAAAAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTACACAGAGAAACCCTGTCTTGAAAACCAAAAAAAGAAAAGAAA  700

seq1  AGAAATGAAACTTAACAGACATGTAACCCTTGGATAGAGCCACTATGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGAAACTTAACAGACATGTAACCCTTGGATAGAGCCACTATGTGT  750

seq1  GTTTGTTTG-TTTTGTTTTTATC-TTTCTCTTTCTTTTTCTTTTTTTGGG  798
      ||||||||| ||||||||||||| ||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTTTGTTTTTATCTTTTCTCTTTCTTTTTCTTTTTTTGGG  800

seq1  GTGGGAGTGGGGACAGGG  816
      ||||||||||||||||||
seq2  GTGGGAGTGGGGACAGGG  818