BAC Information

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BAC

Clone NameB6Ng01-170J21
Chromosome15 (Build37)
Map Location 23,161,871 - 23,162,878
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545091, Cdh18
Downstream geneLOC624863, LOC666989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170J21.b
ACCDH961284
length1,008
definitionDH961284|Mus musculus domesticus DNA, BAC clone: B6Ng01-170J21, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgtataaattacacaatgtattcttttattcatgcttcta
cattttgcatttccttgtcttgcacattgtctgggctagtaattctcagc
tggtaaatgtgaatgacttaaaatttctttctaagaatatttagcaatat
ctagaaacatcaagtttttatatagtgtgagggatgctaccgataccagg
gtttagtggccagaaaggatgctaacaaatgctactgtgaggagtgcatc
ttcaaatgatcaagacttgtaactgcactgacgtcaaatatgataacagg
ggaaactgcagtgtgtaaattacacaaatgggaagaagcattatatgaga
ggagtttacaaaaatatttgatttatgtttgtacgtgtcttaaacaatct
ctgaggcaacagatgttgcctgatactggcaaaactttatggctgagaag
gtattagcccttacagtgcatgtcctactattgtgaagataaattcacat
ggattcaaagctaaatacagtatttgtatctgtatgtctagctaaagggt
actcagacttcatcagagaagctttctttgataccagagttggtgaaccc
agagatgcatggcttctctgggtacaaaatataagtaatacattgtccct
gggtagggcaatgaggataagggctgttaaagtgaccttgtaggcataac
attattgcatgggtctggtttctttgttcttcattgtaaggtgaatgcat
acatctcagtatccaaaatctgatcctgattttactcaatgtgacttcac
tattcattggcctgttcattgtctttcaaaattattagaatgtactacca
ataaatgtaatattatataacattctaagttgaaaactaatattttgtga
cttcatttagaatttataataattcaaaaatttctcctatctcagtgtgt
atatatatatatatatatatatatatatatatatgcatgtatatggtatg
ggtatata
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_23161871_23162878
seq2: B6Ng01-170J21.b_45_1052 (reverse)

seq1  TATATACACATA-CATATACATGCATATATATATATATATATATATATAT  49
      ||||||| |||| |||||||||||||||||||||||||||||||||||||
seq2  TATATACCCATACCATATACATGCATATATATATATATATATATATATAT  50

seq1  ATATATATACACACTGAGATAGGAGAAATTTTTGAATTATTATAAAATTC  99
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATATATATACACACTGAGATAGGAGAAATTTTTGAATTATTAT-AAATTC  99

seq1  TAAATGAAGTCACAAAATATTAGTTTTCAACTTAGAATGTTATATAATAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAAGTCACAAAATATTAGTTTTCAACTTAGAATGTTATATAATAT  149

seq1  TACATTTATTGGTAGTACATTCTAATAATTTTGAAAGACAATGAACAGGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTATTGGTAGTACATTCTAATAATTTTGAAAGACAATGAACAGGC  199

seq1  CAATGAATAGTGAAGTCACATTGAGTAAAATCAGGATCAGATTTTGGATA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAATAGTGAAGTCACATTGAGTAAAATCAGGATCAGATTTTGGATA  249

seq1  CTGAGATGTATGCATTCACCTTACAATGAAGAACAAAGAAACCAGACCCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATGTATGCATTCACCTTACAATGAAGAACAAAGAAACCAGACCCA  299

seq1  TGCAATAATGTTATGCCTACAAGGTCACTTTAACAGCCCTTATCCTCATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATAATGTTATGCCTACAAGGTCACTTTAACAGCCCTTATCCTCATT  349

seq1  GCCCTACCCAGGGACAATGTATTACTTATATTTTGTACCCAGAGAAGCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTACCCAGGGACAATGTATTACTTATATTTTGTACCCAGAGAAGCCA  399

seq1  TGCATCTCTGGGTTCACCAACTCTGGTATCAAAGAAAGCTTCTCTGATGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTCTGGGTTCACCAACTCTGGTATCAAAGAAAGCTTCTCTGATGA  449

seq1  AGTCTGAGTACCCTTTAGCTAGACATACAGATACAAATACTGTATTTAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGAGTACCCTTTAGCTAGACATACAGATACAAATACTGTATTTAGC  499

seq1  TTTGAATCCATGTGAATTTATCTTCACAATAGTAGGACATGCACTGTAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATCCATGTGAATTTATCTTCACAATAGTAGGACATGCACTGTAAG  549

seq1  GGCTAATACCTTCTCAGCCATAAAGTTTTGCCAGTATCAGGCAACATCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAATACCTTCTCAGCCATAAAGTTTTGCCAGTATCAGGCAACATCTG  599

seq1  TTGCCTCAGAGATTGTTTAAGACACGTACAAACATAAATCAAATATTTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCAGAGATTGTTTAAGACACGTACAAACATAAATCAAATATTTTT  649

seq1  GTAAACTCCTCTCATATAATGCTTCTTCCCATTTGTGTAATTTACACACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTCCTCTCATATAATGCTTCTTCCCATTTGTGTAATTTACACACT  699

seq1  GCAGTTTCCCCTGTTATCATATTTGACGTCAGTGCAGTTACAAGTCTTGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTCCCCTGTTATCATATTTGACGTCAGTGCAGTTACAAGTCTTGA  749

seq1  TCATTTGAAGATGCACTCCTCACAGTAGCATTTGTTAGCATCCTTTCTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGAAGATGCACTCCTCACAGTAGCATTTGTTAGCATCCTTTCTGG  799

seq1  CCACTAAACCCTGGTATCGGTAGCATCCCTCACACTATATAAAAACTTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAAACCCTGGTATCGGTAGCATCCCTCACACTATATAAAAACTTGA  849

seq1  TGTTTCTAGATATTGCTAAATATTCTTAGAAAGAAATTTTAAGTCATTCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTAGATATTGCTAAATATTCTTAGAAAGAAATTTTAAGTCATTCA  899

seq1  CATTTACCAGCTGAGAATTACTAGCCCAGACAATGTGCAAGACAAGGAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACCAGCTGAGAATTACTAGCCCAGACAATGTGCAAGACAAGGAAA  949

seq1  TGCAAAATGTAGAAGCATGAATAAAAGAATACATTGTGTAATTTATACAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAATGTAGAAGCATGAATAAAAGAATACATTGTGTAATTTATACAA  999

seq1  AGTGAATTC  1008
      |||||||||
seq2  AGTGAATTC  1008


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