BAC Information

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BAC

Clone NameB6Ng01-170O03
Chromosome15 (Build37)
Map Location 67,657,426 - 67,658,498
singlet/doubletsinglet
Overlap genenone
Upstream geneTg, Sla, Wisp1, Ndrg1, LOC100040667, St3gal1
Downstream geneZfat1, LOC100041000, EG665945
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170O03.bB6Ng01-170O03.g
ACCDH961485DH961486
length1,1271,068
definitionDH961485|Mus musculus domesticus DNA, BAC clone: B6Ng01-170O03, 5' end.DH961486|Mus musculus domesticus DNA, BAC clone: B6Ng01-170O03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttagctttgtaccctatttttaatagggttatttggttc
tctggagtccaacttcttgacttctttgtatatattggatattagccctc
tatccgatgtaggattggtaaagatctgttcctaatttgttggttgccat
tttgtccatttgacagtgtcctttgctttacagaagctttgtaattttat
gaggtcccatatgtcaattcttgaacttacagcataagccattggtgttc
tattcaggaaattttgccctgtgcccatgtgctcaaggttttttcccact
ttcttttctattaggttcagtgtatctggttttatgtgtaggtccttgat
tcacttggagttgacttttgtacaagaagataatagatcaatttatattc
ttctacatgttgaccaccagttgaaccagcaccatttgttgaaagtgctg
tcttttttccactggatggttttagcacttttgtcaaagaacaagtgacc
ataggtgtgtgggttcatttctgggtcttcaattctattctatttgtcac
tagtgctctgtagtacttcttgagatctgagatgctaattcccccagaag
ttcttttattgttgagaatagttttcgctattctgggtattttgttatcc
cagatgaatttgagaattgctctttctaactctatgatgaatcgatttgg
aattttgatggggattgcattgaatctgtaaattgctttcggcaagatgg
ccatttttactatattaattcttccaatctacaagtatgggagatctttc
catcttctggggtcttcttcgatttctttcttcagagaattgaagttctt
gtcataaagatatttcacttgtttgggtagagtccaccagatactttata
ttgttcgtgattattgtgaaagtgtcgtttccttaatttcttttttcatc
ctgcttatccttagaagtataggaaggctacttatttgttttgataattg
ttatatcacgccacttgctgaaattgaatatcaccttagaagggcttggg
agaaatttttgtcacttaagatacatatctctgcagagtgaaagatggac
tccttcctcttccaattattagcctga
gaattcatacaatttcttaatggcatgttaaaggttaggaaacttaagta
agaggcacttatgtggtttgtagaagtgaaatatccactaacaattgcta
tagcaaacaggtagtgagcatgtaatatgttccagacactttacatcttt
attacctcgacactcatcgcaaaaattacagaagggagagcccattatta
ctggagtgtgaggggataatgagcaatagaaagcaacaaggcagatgtaa
gtcagatcagctaagatatcagtgaaaatggaagtggtgagcagtttagg
tgtgtggatgtgctatggttcttagtgttctcacacacaacttagacctg
ggaaaagcacactcagtggatattcaggtttatagagctgtcatgtacat
ggtaatggccttttcttcacccaggtaagttagaaagcaaaaatgcatga
tgaaaacttttatgttgtcattgttaccacccaagtagctcagtagggga
aaagcgtgggacaagggaatggggaagtttaggcatctttctctttcctg
aacaccaaaggcaaagagaaaggcattcccagaactctcaatcgagggaa
ggaggggcgagggaagtcactcaaagtcatgtaactgttctgtggcagat
gcagtaaagctggctctggagttaatgcccaaactaggctgcagcgttca
cagtccagtctgtcttattgggcttcttcctctattgtgtattacctggc
ttaaagagctaagacagtgggatgaaagtatgttgactgccaagtcttcc
aaaggatccaggaacaactctctgtccagagaactagaagcagctgaccc
tcactgcttagtgtgtttctctttgtgctagatttaagcacagctggtag
ctatcattaatgattcacttcagacaccactgcctatgtctttactgact
ctctttaattctaacttggagcatttccaaatttatgagccctcacagag
ccccccaagaacacctggggaccacacagactaggagaaaagccagttct
gttcaagttaatgcagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_67657426_67658498
seq2: B6Ng01-170O03.g_68_1135 (reverse)

seq1  TGCTGCATTAAACTTGAACCAGAACTTGGCTTTCTTCTAGTTCTATGTGG  50
      ||||||||| |||||||| ||||||| |  ||||| |||| ||| |||||
seq2  TGCTGCATT-AACTTGAA-CAGAACTGGCTTTTCTCCTAG-TCTGTGTGG  47

seq1  TCCCCAAGTTGTACTGTGGGGGACTGTGAAGGGCTCATAAAATTTGGAAA  100
      |||||| ||  |  || ||||  ||||| ||||||||| |||||||||||
seq2  TCCCCAGGTGTTCTTGGGGGGCTCTGTG-AGGGCTCAT-AAATTTGGAAA  95

seq1  TGCTCCAAG-TAGGAATAAAGAGAGTCAGTAAAGACATAGGCAGTGGTGT  149
      ||||||||| ||| | ||||||||||||||||||||||||||||||||||
seq2  TGCTCCAAGTTAGAATTAAAGAGAGTCAGTAAAGACATAGGCAGTGGTGT  145

seq1  CTGAAGTGAATCATTAATGATAGCTACCAGCTGTGCTTAAATCTAGCACA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTGAATCATTAATGATAGCTACCAGCTGTGCTTAAATCTAGCACA  195

seq1  AAGAGAAACACACTTAAGCAGTGAGGGTCAGCTGCTTCTAGTTCTCTGGA  249
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAACACAC-TAAGCAGTGAGGGTCAGCTGCTTCTAGTTCTCTGGA  244

seq1  CAGAGAGTTGTTCCTGGATCCTTTGGAAGACTTGGCAGTCAACATACTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGTTGTTCCTGGATCCTTTGGAAGACTTGGCAGTCAACATACTTT  294

seq1  CATCCCACTGTCTTAGCTCTTTAAGCCAGGTAATACACAATAGAGGAAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCACTGTCTTAGCTCTTTAAGCCAGGTAATACACAATAGAGGAAGA  344

seq1  AGCCCAATAAGACAGACTGGACTGTGAACGCTGCAGCCTAGTTTGGGCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAATAAGACAGACTGGACTGTGAACGCTGCAGCCTAGTTTGGGCAT  394

seq1  TAACTCCAGAGCCAGCTTTACTGCATCTGCCACAGAACAGTTACATGACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCCAGAGCCAGCTTTACTGCATCTGCCACAGAACAGTTACATGACT  444

seq1  TTGAGTGACTTCCCTCGCCCCTCCTTCCCTCGATTGAGAGTTCTGGGAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGACTTCCCTCGCCCCTCCTTCCCTCGATTGAGAGTTCTGGGAAT  494

seq1  GCCTTTCTCTTTGCCTTTGGTGTTCAGGAAAGAGAAAGATGCCTAAACTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCTCTTTGCCTTTGGTGTTCAGGAAAGAGAAAGATGCCTAAACTT  544

seq1  CCCCATTCCCTTGTCCCACGCTTTTCCCCTACTGAGCTACTTGGGTGGTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTCCCTTGTCCCACGCTTTTCCCCTACTGAGCTACTTGGGTGGTA  594

seq1  ACAATGACAACATAAAAGTTTTCATCATGCATTTTTGCTTTCTAACTTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGACAACATAAAAGTTTTCATCATGCATTTTTGCTTTCTAACTTAC  644

seq1  CTGGGTGAAGAAAAGGCCATTACCATGTACATGACAGCTCTATAAACCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGAAGAAAAGGCCATTACCATGTACATGACAGCTCTATAAACCTG  694

seq1  AATATCCACTGAGTGTGCTTTTCCCAGGTCTAAGTTGTGTGTGAGAACAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCACTGAGTGTGCTTTTCCCAGGTCTAAGTTGTGTGTGAGAACAC  744

seq1  TAAGAACCATAGCACATCCACACACCTAAACTGCTCACCACTTCCATTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACCATAGCACATCCACACACCTAAACTGCTCACCACTTCCATTTT  794

seq1  CACTGATATCTTAGCTGATCTGACTTACATCTGCCTTGTTGCTTTCTATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATATCTTAGCTGATCTGACTTACATCTGCCTTGTTGCTTTCTATT  844

seq1  GCTCATTATCCCCTCACACTCCAGTAATAATGGGCTCTCCCTTCTGTAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTATCCCCTCACACTCCAGTAATAATGGGCTCTCCCTTCTGTAAT  894

seq1  TTTTGCGATGAGTGTCGAGGTAATAAAGATGTAAAGTGTCTGGAACATAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCGATGAGTGTCGAGGTAATAAAGATGTAAAGTGTCTGGAACATAT  944

seq1  TACATGCTCACTACCTGTTTGCTATAGCAATTGTTAGTGGATATTTCACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCTCACTACCTGTTTGCTATAGCAATTGTTAGTGGATATTTCACT  994

seq1  TCTACAAACCACATAAGTGCCTCTTACTTAAGTTTCCTAACCTTTAACAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAAACCACATAAGTGCCTCTTACTTAAGTTTCCTAACCTTTAACAT  1044

seq1  GCCATTAAGAAATTGTATGAATTC  1073
      ||||||||||||||||||||||||
seq2  GCCATTAAGAAATTGTATGAATTC  1068