BAC Information

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BAC

Clone NameB6Ng01-177K10
Chromosome15 (Build37)
Map Location 44,914,446 - 44,915,593
singlet/doubletsinglet
Overlap genenone
Upstream geneTrhr, LOC665041, Nudcd1, Eny2, Pkhd1l1, Ebag9, 5730410E15Rik, A930017M01Rik, EG432950
Downstream geneKcnv1, LOC100039389, EG432951
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177K10.bB6Ng01-177K10.g
ACCGA004862GA004863
length1,0141,154
definitionB6Ng01-177K10.b B6Ng01-177K10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccataaaaattccaactcaattcttcatagagttagaaagagca
attctcaaagtcatttggaaaaacaacaacaagaaaaaaccaaaacaaaa
cggtatatcaaaaactattctcaacaataaaagaattctgggggaatcac
catctctgacctcaagctgtaccaaagagcaacagtgatgaaaactgcat
ggtattggtatatgacaaacaggtagatcaaggaaacagaattgaagtcc
tgtaaatgaatgtacatacctatggtcacttgatctttgacaaaggagct
aaaaagagatagcattttcaacaaatggtgttggttcaactggcagtcat
cacttagaagaatgcaaaatgatccatttttttctctttttttattaggt
attttcctcgtttacatttccaatgctataccaaaagtcccccataccct
ctcccccccaatcccctacccacccactccccctttttggccctggcgtt
cccctgtaagggacatataaagtttgcaagtccaaagggcctctctttcc
agtgatggctgactaggccatcttttgatacatatgcagctagagacaag
agctccggggtactggttagttcatattgttgttccacctatagggttgc
agttccctttagctccttgggtactttctctagcttctccattgggggcc
ctgtgacccatccaatagctgactgtgatcatccacttctgtgtttgcta
ggccccggcatagtctcacaagagagagctatatctgggtcctttcagca
aaattttgctagtgtatgcaatggtgtcagcgtttggaagctgattatgg
gatggatccctggatatagctatcactaggtggtcccatcctttcatcac
agctccaaattttgtctcggtaactcctttcaatgggtgtttgttcccat
ttctaagaaagggcaaagtgttccacactttggtcttcgttcttcttgag
tttcatgcatttag
gaattctcctaaggatctgctgatcttcacctatactgtggcacatatgc
attcctttatatacaaagatacagacatagacacaaacacaaacacacaa
acatatagatacatatatacataccctaaaacacagaaaataaataagtg
tagagaaatgcatgaaatatttcattgaccctattatagtcatatatcat
tttaaaatttgaggtctaaaatacaaatttatgtatgcatcatatgtatt
catatacatatatgtatacatgtatgaattaattccacaagtaaatagct
acttgactattatgtttatattctgttcaaaataatcctgcatattgtgc
ctttaaaataaagagaactaagaacttcacctttatgtatttctgtgata
tctttaaaatgtttatttcaataaactattaagtgaaaaagatcatctta
aggtgaacaataactttgcacatagctgtaaaaataaaatagtttttcta
agtgtcattcaaacgtaatatgtacatttacattttgttcttcaagaaat
cttttatttctttttattacattacaatttctttgcttatttgtttattt
gtcatgcaatcatttttacttctctaacagtttctgttacagattctagt
ttgaataattagtaaatggtgctcatacttaggtaaagttttggcatttt
tagcaaaatatttggcataatatttagcattagattcctaagctgtaaag
aaaagctgttttattttctacactaaaacaaaacaattatagacatcaaa
taaatgttctagctaatatctctataaattttaaagcagtgaatgggtat
acacaagctgagaacagagagatttgattgtcaaagtgatcagattaaat
gaaatcctgttttggaaaaacatactttttccctgcagggagtgtgaaat
tcaattatcccctttcacatttattggtcctgtctcttatcttttaattg
aaactatacccaacatttgttttatgttctgaaaagggaataccttttaa
aaagaagaaagtcagttgcatgccactgtggtgtatggcaggactgctga
ataacataatgtgtttggagaaacaagagaatggatgtcaatatgcccgt
ttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_44914446_44915593
seq2: B6Ng01-177K10.g_62_1215 (reverse)

seq1  TGAAACGGGGCATA-TGAC-TTCATTCTCTGG--TCTCCAAACACA-TAT  45
      |||||| ||||||| |||| | |||||||| |  |||||||||||| |||
seq2  TGAAAC-GGGCATATTGACATCCATTCTCTTGTTTCTCCAAACACATTAT  49

seq1  G-TAGTCAGCAGTCCTGCCCATACA-CACAGT-GCATGCAAACTGACTTT  92
      | || |||||||||||| ||||||| |||||| |||||| ||||||| ||
seq2  GTTATTCAGCAGTCCTG-CCATACACCACAGTGGCATGC-AACTGAC-TT  96

seq1  TCTTCTTTTTAAAAGGTATTCCCTTTTCAGAACATAAAACAAATGTGGGT  142
      |||||||||||||||||||||||||||||||||||||||||||||| || 
seq2  TCTTCTTTTTAAAAGGTATTCCCTTTTCAGAACATAAAACAAATGTTGGG  146

seq1  AATAGTTTCAAATAAAAGATAAGAGAACAGAACAATAAATGTGAAA-GGG  191
       |||||||||| ||||||||||||||   || |||||||||||||| |||
seq2  TATAGTTTCAATTAAAAGATAAGAGACAGGACCAATAAATGTGAAAGGGG  196

seq1  ATAATTGAAATTTCACACTCCCTGCAGGG-AAAAGTATG-TTTTCCAAAA  239
      ||||||| ||||||||||||||||||||| ||||||||| ||||||||||
seq2  ATAATTG-AATTTCACACTCCCTGCAGGGAAAAAGTATGTTTTTCCAAAA  245

seq1  CAGGATTTCATTTAATCTGATCACTTTGACAATCAAATCTCTCTGTTCTC  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTTCATTTAATCTGATCACTTTGACAATCAAATCTCTCTGTTCTC  295

seq1  AGCTTGTGTATACCCATTCACTGCTTTAAAATTTATAGAGATATTAGCTA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTGTATACCCATTCACTGCTTTAAAATTTATAGAGATATTAGCTA  345

seq1  GAACATTTATTTGATGTCTATAATTGTTTTGTTTTAGTGTAGAAAATAAA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTTATTTGATGTCTATAATTGTTTTGTTTTAGTGTAGAAAATAAA  395

seq1  ACAGCTTTTCTTTACAGCTTAGGAATCTAATGCTAAATATTATGCCAAAT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTTTCTTTACAGCTTAGGAATCTAATGCTAAATATTATGCCAAAT  445

seq1  ATTTTGCTAAAAATGCCAAAACTTTACCTAAGTATGAGCACCATTTACTA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCTAAAAATGCCAAAACTTTACCTAAGTATGAGCACCATTTACTA  495

seq1  ATTATTCAAACTAGAATCTGTAACAGAAACTGTTAGAGAAGTAAAAATGA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCAAACTAGAATCTGTAACAGAAACTGTTAGAGAAGTAAAAATGA  545

seq1  TTGCATGACAAATAAACAAATAAGCAAAGAAATTGTAATGTAATAAAAAG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGACAAATAAACAAATAAGCAAAGAAATTGTAATGTAATAAAAAG  595

seq1  AAATAAAAGATTTCTTGAAGAACAAAATGTAAATGTACATATTACGTTTG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAGATTTCTTGAAGAACAAAATGTAAATGTACATATTACGTTTG  645

seq1  AATGACACTTAGAAAAACTATTTTATTTTTACAGCTATGTGCAAAGTTAT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACACTTAGAAAAACTATTTTATTTTTACAGCTATGTGCAAAGTTAT  695

seq1  TGTTCACCTTAAGATGATCTTTTTCACTTAATAGTTTATTGAAATAAACA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACCTTAAGATGATCTTTTTCACTTAATAGTTTATTGAAATAAACA  745

seq1  TTTTAAAGATATCACAGAAATACATAAAGGTGAAGTTCTTAGTTCTCTTT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGATATCACAGAAATACATAAAGGTGAAGTTCTTAGTTCTCTTT  795

seq1  ATTTTAAAGGCACAATATGCAGGATTATTTTGAACAGAATATAAACATAA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAGGCACAATATGCAGGATTATTTTGAACAGAATATAAACATAA  845

seq1  TAGTCAAGTAGCTATTTACTTGTGGAATTAATTCATACATGTATACATAT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAAGTAGCTATTTACTTGTGGAATTAATTCATACATGTATACATAT  895

seq1  ATGTATATGAATACATATGATGCATACATAAATTTGTATTTTAGACCTCA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATGAATACATATGATGCATACATAAATTTGTATTTTAGACCTCA  945

seq1  AATTTTAAAATGATATATGACTATAATAGGGTCAATGAAATATTTCATGC  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAAATGATATATGACTATAATAGGGTCAATGAAATATTTCATGC  995

seq1  ATTTCTCTACACTTATTTATTTTCTGTGTTTTAGGGTATGTATATATGTA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTACACTTATTTATTTTCTGTGTTTTAGGGTATGTATATATGTA  1045

seq1  TCTATATGTTTGTGTGTTTGTGTTTGTGTCTATGTCTGTATCTTTGTATA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATGTTTGTGTGTTTGTGTTTGTGTCTATGTCTGTATCTTTGTATA  1095

seq1  TAAAGGAATGCATATGTGCCACAGTATAGGTGAAGATCAGCAGATCCTTA  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAATGCATATGTGCCACAGTATAGGTGAAGATCAGCAGATCCTTA  1145

seq1  GGAGAATTC  1148
      |||||||||
seq2  GGAGAATTC  1154