BAC Information

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BAC

Clone NameB6Ng01-181O20
Chromosome15 (Build37)
Map Location 70,189,697 - 70,323,516
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383050
Downstream geneLOC383051, 1700010C24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181O20.bB6Ng01-181O20.g
ACCGA007958GA007959
length1,1861,086
definitionB6Ng01-181O20.b B6Ng01-181O20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,322,342 - 70,323,516)(70,189,697 - 70,190,764)
sequence
gaattcacttgtaaaattatatcctgggttgtgagagttacatgtgttgg
agatccttatgttttgttcacaactattctgttttttttcttctttttta
ttgtttcattataaacatctatttaatgggtgtggactcaggcttcagta
tagcattcactggaatgcatatttatctatgtaatctgtgcattatttat
gcattttatctgggatgctcagagtttctcatagacctgcagttcaacag
ttagtgagcaaattgagctgttcctgtgttcaaagatcatggcaagttct
ttcaactactgagtatttccccataacttacattgagtgattttctaaaa
ctcccccatctggagaggatggagtgatggctcagcagctaagagtagtg
tttgctcttgtagaggaccaggttcagttcctaggaccagtatacccaca
tgacagttcaaaattgtttactgttccagttctaggaaatctgacacctt
ctgaccttcctgggtactaggtacactgatgatacacgtacatacacaca
tgcaaatagaacagttatgcttacactaagcagagccttgcaggtttaag
tatcagtttctgcatatatttattcagtgttcagttctggacactctggc
atctcatgattcaagattcaagcttgtactctgtcatatggagcacagag
accctacctcatcagaactcaatgacatggtaactcttaatgtcatttca
agtttccttttcttaatatagacaaaattatccatttttacatatattaa
taaaaattataaaaatgataagtgtacttattctttacgagctattggga
tggctattcttggtgctagtttgactacatctgggaattatctaaaaggt
aagaatctggtttacacctctaaagggtttttttcttttttttaaattaa
tttattttttccacactccatattccatttccctgcctcctcctctgatc
cacctcccaacagctccacatcacacacctcctccccacttcacccgtac
tccacgtggatgcccccagcccttcttgcccccccacttctaacgtcctt
gtgcctccattatctgagggtagttgcatccattctctgaatgacaagat
ccaaagttctctctaactgtatgtgtgtatgtgggg

gaattcactatttaattgaaaggccattgccttaatgaataaggtaagag
gtaatccgcatctccaggagtggtaccctgatgcacatagcaactcatgc
actcatgcatctctagggttataggggctgtgtgctctttatctaactgt
tggctggaaatatcctggactgtactccctttccatatgcccttataagg
ttccttcccttggcatcagctactgcttcaatgtgttaaaggggtcaggg
ggattgacacgtgtaggctggtataagaaacttcaaagcttggggaaaag
taccatcagctgagttgctctaagtatttctcaatatttaagcacaacgc
aaaacatatcctctactcatttgggtggaagatggcacattcttgagatt
ttgcagttcttatttttaattaagtattttacttatttacagccctaatg
ttgctctccctcctcatcccccttcccattgtttttgaccttttccccct
cccctttgcttttgagcaggtactccccacttcccctggcaattatctat
aggattaggcacatcctttctcactgttacatatgtgctggagtccatag
acccatcaatgtctgctcttttgaaagatgtttactgtcattcttcacaa
ttagagacaagcatgaatgtcaccaaagctccaaaacggttcctcttccc
tagttttgatggaggaagttcattctcccttccttcttaaaaacataaaa
agtgtttcgatggttactgataatctcattatccccaagctttgaaaaca
gcattagtgaagggatgggtagggattttaaagtcatagagaagatatat
ttgaactacgtttgaaaatagttgattgttgcaatggaagagaaagaaaa
caattccaaggtaaacaactagaatattgggctaaccagtgcacttggaa
tgatccttttcttcaattctatcaacaataccaggtcttggacccttttt
ttcacccaaggagacacttaagaagtattggaaaggaaatttggaataaa
actttctctatgtgaagttggcaaggcctgtgcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_70322342_70323516
seq2: B6Ng01-181O20.b_43_1228 (reverse)

seq1  CCCCA---ACACACATACAGT---AGAGAACTTCTGGGTCTTTGTTCATT  44
      |||||   |||||||||||||   ||||||||| ||| ||||   |||||
seq2  CCCCACATACACACATACAGTTAGAGAGAACTT-TGGATCTT--GTCATT  47

seq1  CAGAGA--TGATGCACCTAACCCTCAAGATAATGGAGGCACCAGGACGTT  92
      ||||||   |||||| || |||||| ||||||||||||||| |||||| |
seq2  CAGAGAATGGATGCAACT-ACCCTC-AGATAATGGAGGCACAAGGACG-T  94

seq1  TAGAGGTTGGGGGGCAAG-AGGGCTGGGGGCATCCACGTGGAGTACGGGT  141
      |||| || |||||||||| |||||||||||||||||||||||||||||||
seq2  TAGAAGTGGGGGGGCAAGAAGGGCTGGGGGCATCCACGTGGAGTACGGGT  144

seq1  GAAGTGGGGAGGAGGTGTGTGATGTGGAGCTGTT-GGAGGTGGATCAGA-  189
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  GAAGTGGGGAGGAGGTGTGTGATGTGGAGCTGTTGGGAGGTGGATCAGAG  194

seq1  GAGGAGGCAGGG-AATGGAATATGGAGTGTG--AAAAATAAATTAATTTT  236
      |||||||||||| ||||||||||||||||||  |||||||||||||||| 
seq2  GAGGAGGCAGGGAAATGGAATATGGAGTGTGGAAAAAATAAATTAATTTA  244

seq1  AAAAAAAG-AAAAAACCCTTTAGAGGTGT-AACCAGATTCTTACCTTTTA  284
      |||||||| |||||||||||||||||||| ||||||||||||||||||||
seq2  AAAAAAAGAAAAAAACCCTTTAGAGGTGTAAACCAGATTCTTACCTTTTA  294

seq1  GATAATT-CCAGATGTAGTCAAACTAGCACCAAGAATAGCCATCCCAATA  333
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTCCCAGATGTAGTCAAACTAGCACCAAGAATAGCCATCCCAATA  344

seq1  GCTCGTAAAGAATAAGTACACTTATCATTTTTATAATTTTTATTAATATA  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTAAAGAATAAGTACACTTATCATTTTTATAATTTTTATTAATATA  394

seq1  TGTAAAAATGGATAATTTTGTCTATATTAAGAAAAGGAAACTTGAAATGA  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAATGGATAATTTTGTCTATATTAAGAAAAGGAAACTTGAAATGA  444

seq1  CATTAAGAGTTACCATGTCATTGAGTTCTGATGAGGTAGGGTCTCTGTGC  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGAGTTACCATGTCATTGAGTTCTGATGAGGTAGGGTCTCTGTGC  494

seq1  TCCATATGACAGAGTACAAGCTTGAATCTTGAATCATGAGATGCCAGAGT  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATGACAGAGTACAAGCTTGAATCTTGAATCATGAGATGCCAGAGT  544

seq1  GTCCAGAACTGAACACTGAATAAATATATGCAGAAACTGATACTTAAACC  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGAACTGAACACTGAATAAATATATGCAGAAACTGATACTTAAACC  594

seq1  TGCAAGGCTCTGCTTAGTGTAAGCATAACTGTTCTATTTGCATGTGTGTA  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGCTCTGCTTAGTGTAAGCATAACTGTTCTATTTGCATGTGTGTA  644

seq1  TGTACGTGTATCATCAGTGTACCTAGTACCCAGGAAGGTCAGAAGGTGTC  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACGTGTATCATCAGTGTACCTAGTACCCAGGAAGGTCAGAAGGTGTC  694

seq1  AGATTTCCTAGAACTGGAACAGTAAACAATTTTGAACTGTCATGTGGGTA  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCCTAGAACTGGAACAGTAAACAATTTTGAACTGTCATGTGGGTA  744

seq1  TACTGGTCCTAGGAACTGAACCTGGTCCTCTACAAGAGCAAACACTACTC  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTCCTAGGAACTGAACCTGGTCCTCTACAAGAGCAAACACTACTC  794

seq1  TTAGCTGCTGAGCCATCACTCCATCCTCTCCAGATGGGGGAGTTTTAGAA  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGCTGAGCCATCACTCCATCCTCTCCAGATGGGGGAGTTTTAGAA  844

seq1  AATCACTCAATGTAAGTTATGGGGAAATACTCAGTAGTTGAAAGAACTTG  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTCAATGTAAGTTATGGGGAAATACTCAGTAGTTGAAAGAACTTG  894

seq1  CCATGATCTTTGAACACAGGAACAGCTCAATTTGCTCACTAACTGTTGAA  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATCTTTGAACACAGGAACAGCTCAATTTGCTCACTAACTGTTGAA  944

seq1  CTGCAGGTCTATGAGAAACTCTGAGCATCCCAGATAAAATGCATAAATAA  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGTCTATGAGAAACTCTGAGCATCCCAGATAAAATGCATAAATAA  994

seq1  TGCACAGATTACATAGATAAATATGCATTCCAGTGAATGCTATACTGAAG  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGATTACATAGATAAATATGCATTCCAGTGAATGCTATACTGAAG  1044

seq1  CCTGAGTCCACACCCATTAAATAGATGTTTATAATGAAACAATAAAAAAG  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTCCACACCCATTAAATAGATGTTTATAATGAAACAATAAAAAAG  1094

seq1  AAGAAAAAAAACAGAATAGTTGTGAACAAAACATAAGGATCTCCAACACA  1133
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAAAAACAGAATAGTTGTGAACAAAACATAAGGATCTCCAACACA  1144

seq1  TGTAACTCTCACAACCCAGGATATAATTTTACAAGTGAATTC  1175
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTCTCACAACCCAGGATATAATTTTACAAGTGAATTC  1186


seq1: chr15_70189697_70190764
seq2: B6Ng01-181O20.g_66_1151

seq1  GAATTCACTATTTAATTGAAAGGCCATTGCCTTAATGAATAAGGTAAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATTTAATTGAAAGGCCATTGCCTTAATGAATAAGGTAAGAG  50

seq1  GTAATCCGCATCTCCAGGAGTGGTACCCTGATGCACATAGCAACTCATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCCGCATCTCCAGGAGTGGTACCCTGATGCACATAGCAACTCATGC  100

seq1  ACTCATGCATCTCTAGGGTTATAGGGGCTGTGTGCTCTTTATCTAACTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGCATCTCTAGGGTTATAGGGGCTGTGTGCTCTTTATCTAACTGT  150

seq1  TGGCTGGAAATATCCTGGACTGTACTCCCTTTCCATATGCCCTTATAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGAAATATCCTGGACTGTACTCCCTTTCCATATGCCCTTATAAGG  200

seq1  TTCCTTCCCTTGGCATCAGCTACTGCTTCAATGTGTTAAAGGGGTCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCCTTGGCATCAGCTACTGCTTCAATGTGTTAAAGGGGTCAGGG  250

seq1  GGATTGACACGTGTAGGCTGGTATAAGAAACTTCAAAGCTTGGGGAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGACACGTGTAGGCTGGTATAAGAAACTTCAAAGCTTGGGGAAAAG  300

seq1  TACCATCAGCTGAGTTGCTCTAAGTATTTCTCAATATTTAAGCACAACGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCAGCTGAGTTGCTCTAAGTATTTCTCAATATTTAAGCACAACGC  350

seq1  AAAACATATCCTCTACTCATTTGGGTGGAAGATGGCACATTCTTGAGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATATCCTCTACTCATTTGGGTGGAAGATGGCACATTCTTGAGATT  400

seq1  TTGCAGTTCTTATTTTTAATTAAGTATTTTACTTATTTACAGCCCTAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTTCTTATTTTTAATTAAGTATTTTACTTATTTACAGCCCTAATG  450

seq1  TTGCTCTCCCTCCTCATCCCCCTTCCCATTGTTTTTGACCTTTTCCCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTCCCTCCTCATCCCCCTTCCCATTGTTTTTGACCTTTTCCCCCT  500

seq1  CCCCTTTGCTTTTGAGCAGGTACTCCCCACTTCCCCTGGCAATTATCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTGCTTTTGAGCAGGTACTCCCCACTTCCCCTGGCAATTATCTAT  550

seq1  AGGATTAGGCACATCCTTTCTCACTGTTACATATGTGCTGGAGTCCATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTAGGCACATCCTTTCTCACTGTTACATATGTGCTGGAGTCCATAG  600

seq1  ACCCATCAATGTCTGCTCTTTTGAAAGATGTTTACTGTCATTCTTCACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATCAATGTCTGCTCTTTTGAAAGATGTTTACTGTCATTCTTCACAA  650

seq1  TTAGAGACAAGCATGAATGTCACCAAAGCTCCAAAACGGTTCCTCTTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGACAAGCATGAATGTCACCAAAGCTCCAAAACGGTTCCTCTTCCC  700

seq1  TAGTTTTGATGGAGGAAGTTCATTCTCCCTTCCTTCTTAAAAACATAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTGATGGAGGAAGTTCATTCTCCCTTCCTTCTTAAAAACATAAAA  750

seq1  AGTGTTTCGATGGTTACTGATAATCTCATTATCCCCAAGCTTTGAAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTCGATGGTTACTGATAATCTCATTATCCCCAAGCTTTGAAAACA  800

seq1  GCATTAGTGAA-GGATGGGTAGGGATTTTAAAGTCATAGAGAAGATATAT  849
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCATTAGTGAAGGGATGGGTAGGGATTTTAAAGTCATAGAGAAGATATAT  850

seq1  TTGAACTACGTTTGAAAATAGTTGAATGTTGCAATGGAAGAGAAAGAAAA  899
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTGAACTACGTTTGAAAATAGTTGATTGTTGCAATGGAAGAGAAAGAAAA  900

seq1  CAATTCCAAGGTAAACAACTAG-ATATT-GGCTAACCAGTGCACTT-GAA  946
      |||||||||||||||||||||| ||||| ||||||||||||||||| |||
seq2  CAATTCCAAGGTAAACAACTAGAATATTGGGCTAACCAGTGCACTTGGAA  950

seq1  TGAT-CTTTTCT--CATTCTATCAACAATACCAGG-CTTTGACCC-TTTT  991
      |||| |||||||   |||||||||||||||||||| ||| ||||| ||||
seq2  TGATCCTTTTCTTCAATTCTATCAACAATACCAGGTCTTGGACCCTTTTT  1000

seq1  TTCACC--AAGAGACAC-TAAGGAGTATTGG-AAGGAAATTT-GAATAAA  1036
      ||||||  | ||||||| |||| |||||||| |||||||||| |||||||
seq2  TTCACCCAAGGAGACACTTAAGAAGTATTGGAAAGGAAATTTGGAATAAA  1050

seq1  ATTTTCT---AGTGAAGTTTGCAA-GCCTGTGCAGA  1068
      | |||||    |||||||| |||| |||||||||||
seq2  ACTTTCTCTATGTGAAGTTGGCAAGGCCTGTGCAGA  1086


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