BAC Information

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BAC

Clone NameB6Ng01-183O15
Chromosome15 (Build37)
Map Location 89,925,222 - 90,007,281
singlet/doubletdoublet
Overlap genenone
Upstream gene1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1, Adm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa, Shank3, Acr, Rabl2a, LOC676575, Syt10
Downstream geneAlg10b, Cpne8, EG627342, LOC100042462, LOC100042471, EG667682, Tcea1-ps1, Spn-ps, Kif21a, EG635871, Abcd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183O15.bB6Ng01-183O15.g
ACCGA009421GA009422
length1,1431,054
definitionB6Ng01-183O15.b B6Ng01-183O15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,006,143 - 90,007,281)(89,925,222 - 89,926,273)
sequence
gaattcaaaattcccgcagctctatgtactataatgaaaagcctagcaaa
cccagtagattcacatcctattgctatagcattgtgaactctaacaacct
attgtatggcatagttgaggtaataatttatagattgtcatgaaagacct
agataaatagacaacctgataggaagtaccaaatggccaatcttccttct
ttctgagtcataacagttaaagtttatgtctatacagtgctagctacaag
acctccaacagagtgacctctgatcatactcatataagaaatggttccct
ggtgtgaaggcaaaattcttctggatgcaaagacccgtctctcacttaat
tggttatgcctatttcagtgtcagttatattcatgtgttaaggggagtta
aggaaatatcaaggttagaatattatgcctagagggaagtttattgtttt
aaaaatatgttgtagttcttattgttattgaaactggagagaggattata
attatcttgctactcatgatcagagccatccaggtcatgaaagaacatta
aatgaaaaattgatggatttctatgtcataggtagctctatagaaagata
tatctcatggatgtgccgaaattggctctactttccaaaatggatgacaa
aatggcagcctaacataacatctgtacataaactcttgggtgaaaggatg
atatgtttaaaccctagtcagagacactggggaacaacattgctgtgcct
gcttgtacatgcatgtgtgtgcatttgtacatgcacctggacaagatggt
ctatctccagccttcctagcctcagtgaaaagctgttttcaacgtgcaaa
aatgtgtgtcacagaaaactgtaatagatgcttttatacttactatgtct
gtttttttttttttaactgtttatactgataacagtgtttgggaaaatcc
ttcatgggaagtgagggatcaggctagagtctcttctgaacctgcagcaa
gcccgtgacagcttattgaaatgcaagatcgtaaacaaagggtgaggcaa
gcaagttactgagagatgagcagccacctcagttgggcagggcttgaaag
ggcttgtagaagaaggctgatgaaagcctatgccttactgaga
gaattcctaactagtactgtcaaggtttccagaaatgctcacgctctcct
ggcctaacatagcaccttatccctagtgagcagtaggattagttccaagg
gacacacagagtgattctgtgtgagctcatagcaggtgactgtttagaaa
tgttgctttccctctcagagtcatctctactacaaatgtctctgaccaat
tcccacagggctatacatgacacaaacaggaacaagctgatatttctgaa
ggtcactgctagacatgtggccagaaacttagacttgagcttccaagaag
gccaaggtgtaaatgttactgttgaaccgcagcggcataaacacactgca
cagcagacacaacagcgcagctcttggtgttgattttttttttttgatgc
catctctaagcaaagagaaaccatccctttctagtcactgatgaattttc
attccttggaagactttgcagtgagaattttcatttgttctgaatctgac
agcggctatcctcaaactcagctggtacccaggctagatacctctcagat
tcttccaagccccagacaagacatgactgtccagccctgcacggcctctg
tgtctcacttgctttgtcacactatccttagatactatgtgtttgctttg
ctttgttttgttttgttttcatattctttattccctggctagaattcctc
tcacttgcccttctttttctggttactattcacacttacacacaagttat
ttccaagataaacacttacacaatggcaaaaattagcatcttcagaggct
agagagatggttcagagggtaagagcactggatgctctttcaaaggtcct
gagttcagttcccagcaatcacatggtggctcacaaccatctataatgag
atctggtgccctcttctggcctgcaggcatacatgcagcagaatgttgta
tacatataaataatcctttttttttttttttttaaaaaagcattctcatc
atggcctctcttctgcatggattctctgagccctgtgcactttccttctt
catc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_90006143_90007281
seq2: B6Ng01-183O15.b_46_1188 (reverse)

seq1  TCTCAGTAAGCATTAAGCCTTCATCAGCCTTTCTTCT-CAAG-CCTTCCA  48
      ||||||||||   || || |||||||||| ||||||| |||| |||| ||
seq2  TCTCAGTAAGGCATAGGCTTTCATCAGCC-TTCTTCTACAAGCCCTTTCA  49

seq1  AGCCCCTGCCCACCTGAGGT-GCTGCTCATTCTCTTCAGTAACTTGCTTG  97
      || ||||||||| ||||||| |||||||| |||| |||||||||||||||
seq2  AG-CCCTGCCCAACTGAGGTGGCTGCTCA-TCTC-TCAGTAACTTGCTTG  96

seq1  CTTCACCCTTTGTTTACGATCTTGCA-TTCAAT-AGCTGTCACGGGCTTG  145
      | |||||||||||||||||||||||| |||||| ||||||||||||||||
seq2  CCTCACCCTTTGTTTACGATCTTGCATTTCAATAAGCTGTCACGGGCTTG  146

seq1  CTGCAGGTTCAAGAGAGACTCTAGCCTGATCCCTCACTT-CCATGAAGGA  194
      |||||||||||  |||||||||||||||||||||||||| ||||||||||
seq2  CTGCAGGTTCAGAAGAGACTCTAGCCTGATCCCTCACTTCCCATGAAGGA  196

seq1  TTTT-CCAAACACTGTTATCAGTATAAACAGTT-AAAAAAAAAAAACAGA  242
      |||| |||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTTCCCAAACACTGTTATCAGTATAAACAGTTAAAAAAAAAAAAACAGA  246

seq1  CATAGTAAGTATAAAAGCATCTATTACAGTTTTCTGTGACACACATTTTT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTAAGTATAAAAGCATCTATTACAGTTTTCTGTGACACACATTTTT  296

seq1  GCACGTTGAAAACAGCTTTTCACTGAGGCTAGGAAGGCTGGAGATAGACC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTTGAAAACAGCTTTTCACTGAGGCTAGGAAGGCTGGAGATAGACC  346

seq1  ATCTTGTCCAGGTGCATGTACAAATGCACACACATGCATGTACAAGCAGG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTCCAGGTGCATGTACAAATGCACACACATGCATGTACAAGCAGG  396

seq1  CACAGCAATGTTGTTCCCCAGTGTCTCTGACTAGGGTTTAAACATATCAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAATGTTGTTCCCCAGTGTCTCTGACTAGGGTTTAAACATATCAT  446

seq1  CCTTTCACCCAAGAGTTTATGTACAGATGTTATGTTAGGCTGCCATTTTG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCACCCAAGAGTTTATGTACAGATGTTATGTTAGGCTGCCATTTTG  496

seq1  TCATCCATTTTGGAAAGTAGAGCCAATTTCGGCACATCCATGAGATATAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCATTTTGGAAAGTAGAGCCAATTTCGGCACATCCATGAGATATAT  546

seq1  CTTTCTATAGAGCTACCTATGACATAGAAATCCATCAATTTTTCATTTAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTATAGAGCTACCTATGACATAGAAATCCATCAATTTTTCATTTAA  596

seq1  TGTTCTTTCATGACCTGGATGGCTCTGATCATGAGTAGCAAGATAATTAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTCATGACCTGGATGGCTCTGATCATGAGTAGCAAGATAATTAT  646

seq1  AATCCTCTCTCCAGTTTCAATAACAATAAGAACTACAACATATTTTTAAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCTCTCCAGTTTCAATAACAATAAGAACTACAACATATTTTTAAA  696

seq1  ACAATAAACTTCCCTCTAGGCATAATATTCTAACCTTGATATTTCCTTAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAACTTCCCTCTAGGCATAATATTCTAACCTTGATATTTCCTTAA  746

seq1  CTCCCCTTAACACATGAATATAACTGACACTGAAATAGGCATAACCAATT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTTAACACATGAATATAACTGACACTGAAATAGGCATAACCAATT  796

seq1  AAGTGAGAGACGGGTCTTTGCATCCAGAAGAATTTTGCCTTCACACCAGG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGAGACGGGTCTTTGCATCCAGAAGAATTTTGCCTTCACACCAGG  846

seq1  GAACCATTTCTTATATGAGTATGATCAGAGGTCACTCTGTTGGAGGTCTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCATTTCTTATATGAGTATGATCAGAGGTCACTCTGTTGGAGGTCTT  896

seq1  GTAGCTAGCACTGTATAGACATAAACTTTAACTGTTATGACTCAGAAAGA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTAGCACTGTATAGACATAAACTTTAACTGTTATGACTCAGAAAGA  946

seq1  AGGAAGATTGGCCATTTGGTACTTCCTATCAGGTTGTCTATTTATCTAGG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGATTGGCCATTTGGTACTTCCTATCAGGTTGTCTATTTATCTAGG  996

seq1  TCTTTCATGACAATCTATAAATTATTACCTCAACTATGCCATACAATAGG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCATGACAATCTATAAATTATTACCTCAACTATGCCATACAATAGG  1046

seq1  TTGTTAGAGTTCACAATGCTATAGCAATAGGATGTGAATCTACTGGGTTT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGAGTTCACAATGCTATAGCAATAGGATGTGAATCTACTGGGTTT  1096

seq1  GCTAGGCTTTTCATTATAGTACATAGAGCTGCGGGAATTTTGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGCTTTTCATTATAGTACATAGAGCTGCGGGAATTTTGAATTC  1143

seq1: chr15_89925222_89926273
seq2: B6Ng01-183O15.g_66_1119

seq1  GAATTCCTAACTAGTACTGTCAAGGTTTCCAGAAATGCTCACGCTCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAACTAGTACTGTCAAGGTTTCCAGAAATGCTCACGCTCTCCT  50

seq1  GGCCTAACATAGCACCTTATCCCTAGTGAGCAGTAGGATTAGTTCCAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAACATAGCACCTTATCCCTAGTGAGCAGTAGGATTAGTTCCAAGG  100

seq1  GACACACAGAGTGATTCTGTGTGAGCTCATAGCAGGTGACTGTTTAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACAGAGTGATTCTGTGTGAGCTCATAGCAGGTGACTGTTTAGAAA  150

seq1  TGTTGCTTTCCCTCTCAGAGTCATCTCTACTACAAATGTCTCTGACCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTTTCCCTCTCAGAGTCATCTCTACTACAAATGTCTCTGACCAAT  200

seq1  TCCCACAGGGCTATACATGACACAAACAGGAACAAGCTGATATTTCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACAGGGCTATACATGACACAAACAGGAACAAGCTGATATTTCTGAA  250

seq1  GGTCACTGCTAGACATGTGGCCAGAAACTTAGACTTGAGCTTCCAAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACTGCTAGACATGTGGCCAGAAACTTAGACTTGAGCTTCCAAGAAG  300

seq1  GCCAAGGTGTAAATGTTACTGTTGAACCGCAGCGGCATAAACACACTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGGTGTAAATGTTACTGTTGAACCGCAGCGGCATAAACACACTGCA  350

seq1  CAGCAGACACAACAGCGCAGCTCTTGGTGTTGATTTTTTTTTTTTGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGACACAACAGCGCAGCTCTTGGTGTTGATTTTTTTTTTTTGATGC  400

seq1  CATCTCTAAGCAAAGAGAAACCATCCCTTTCTAGTCACTGATGAATTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTAAGCAAAGAGAAACCATCCCTTTCTAGTCACTGATGAATTTTC  450

seq1  ATTCCTTGGAAGACTTTGCAGTGAGAATTTTCATTTGTTCTGAATCTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTGGAAGACTTTGCAGTGAGAATTTTCATTTGTTCTGAATCTGAC  500

seq1  AGCGGCTATCCTCAAACTCAGCTGGTACCCAGGCTAGATACCTCTCAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGCTATCCTCAAACTCAGCTGGTACCCAGGCTAGATACCTCTCAGAT  550

seq1  TCTTCCAAGCCCCAGACAAGACATGACTGTCCAGCCCTGCACGGCCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAAGCCCCAGACAAGACATGACTGTCCAGCCCTGCACGGCCTCTG  600

seq1  TGTCTCACTTGCTTTGTCACACTATCCTTAGATACTATGTGTTTGCTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCACTTGCTTTGTCACACTATCCTTAGATACTATGTGTTTGCTTTG  650

seq1  CTTTGTTTTGTTTTGTTTTCATATTCTTTATTCCCTGGCTAGAATTCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTTGTTTTGTTTTCATATTCTTTATTCCCTGGCTAGAATTCCTC  700

seq1  TCACTTGCCCTTCTTTTTCTGGTTACTATTCACACTTACACACAAGTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGCCCTTCTTTTTCTGGTTACTATTCACACTTACACACAAGTTAT  750

seq1  TTCCAAGATAAACACTTACACAATGGCAAAAATTAGCATCTTCAGAGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGATAAACACTTACACAATGGCAAAAATTAGCATCTTCAGAGGCT  800

seq1  AGAGAGATGGTTCAGAGGGTAAGAGCACTGGATGCTCTTTCAAAGGTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGATGGTTCAGAGGGTAAGAGCACTGGATGCTCTTTCAAAGGTCCT  850

seq1  GAGTTCAGTTCCCAGCAATCACATGGTGGCTCACAACCATCTATAATGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAGTTCCCAGCAATCACATGGTGGCTCACAACCATCTATAATGAG  900

seq1  ATCTGGTGCCCTCTTCTGGCCTGCAGGCATACATGCAGGCAGAATGTTGT  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATCTGGTGCCCTCTTCTGGCCTGCAGGCATACATGCA-GCAGAATGTTGT  949

seq1  ATACATAATAAATAAATCC---TTTTTTTTTTTTTTAAAAAAGCATTCTC  997
      |||||| |||||| |||||   ||||||||||||||||||||||||||| 
seq2  ATACAT-ATAAAT-AATCCTTTTTTTTTTTTTTTTTAAAAAAGCATTCT-  996

seq1  CATCATGGCCTCTC-TCTGCATGG-TTCTCTGAGCCCTGTGCACTTTCTT  1045
      |||||||||||||| ||||||||| ||||||||||||||||||||||| |
seq2  CATCATGGCCTCTCTTCTGCATGGATTCTCTGAGCCCTGTGCACTTTCCT  1046

seq1  TC-TCATC  1052
      || |||||
seq2  TCTTCATC  1054