BAC Information

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BAC

Clone NameB6Ng01-185P19
Chromosome15 (Build37)
Map Location 37,068,537 - 37,230,465
singlet/doubletdoublet
Overlap geneLOC670911, LOC667492, LOC100041288, Grhl2
Upstream geneRgs22, Fbxo43, 1700074I03Rik, Polr2k, Spag1, Rnf19, LOC670773, EG268795, EG545101, Ankrd46, 4631426E05Rik, Pabpc1, LOC626746, Ywhaz, Zfp706
Downstream geneNcald, LOC667498, 4930447A16Rik, LOC100041313, LOC667534, Rrm2b, LOC100041478, Edd1, Odf1, LOC382986, LOC667563, Klf10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185P19.bB6Ng01-185P19.g
ACCGA010950GA010951
length255413
definitionB6Ng01-185P19.b B6Ng01-185P19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,068,537 - 37,068,791)(37,230,047 - 37,230,465)
sequence
agagtcttgtgcatgctaaggcaagtatcttaccactgagttatatccca
gtccaaaactaaagtcattttaagaagaatgttttcattcagagatgatg
cacctaaccttcaagactagaggccccagggagtttagaggtcaggtggg
gtgaaggggtgggacatccatgtggagacagtggggcagggaggaggtat
gggatatggagcagtcagagggtgtatggggaatggggaatcccccttgg
agtgt
tcattatcatctagtacggtctgtttaaggagcagttccaccctctcatt
aaaatgggggaggggaaggggttgtcgtcaggaatccactacaccccatc
ctccgtggaacattccttctgcttagccatttgggctccaatattccctg
gaaaagaaaagctgtttatcaggaaaggctcattaagcaataatgatctg
ggcctggaaaaacaagactcctcagcgcagaaaagaaaggtacagaagta
cggccttgaattcccaaattctttgttttgtttttggttgcttttaaaca
actccccatttgattgatccagtaaatctaatactttctagctaggttta
aaaggacaatctcccctggtttactagtgtgtattacgtttctacactaa
gtaatttaatctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_37068537_37068791
seq2: B6Ng01-185P19.b_50_304

seq1  AGAGTCTTGTGCATGCTAAGGCAAGTATCTTACCACTGAGTTATATCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTTGTGCATGCTAAGGCAAGTATCTTACCACTGAGTTATATCCCA  50

seq1  GTCCAAAACTAAAGTCATTTTAAGAAGAATGTTTTCATTCAGAGATGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAAACTAAAGTCATTTTAAGAAGAATGTTTTCATTCAGAGATGATG  100

seq1  CACCTAACCTTCAAGACTAGAGGCCCCAGGGAGTTTAGAGGTCAGGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAACCTTCAAGACTAGAGGCCCCAGGGAGTTTAGAGGTCAGGTGGG  150

seq1  GTGAAGGGGTGGGACATCCATGTGGAGACAGTGGGGCAGGGAGGAGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGGGTGGGACATCCATGTGGAGACAGTGGGGCAGGGAGGAGGTAT  200

seq1  GGGATATGGAGCAGTCAGAGGGTGAATGGGGAATGGGGAATAAAATATGG  250
      |||||||||||||||||||||||| ||||||||||||||||      |||
seq2  GGGATATGGAGCAGTCAGAGGGTGTATGGGGAATGGGGAATCCCCCTTGG  250

seq1  AGTGT  255
      |||||
seq2  AGTGT  255

seq1: chr15_37230047_37230465
seq2: B6Ng01-185P19.g_70_488 (reverse)

seq1  ATGATTTAATTACTTAGTGTAGAAACGTAATACACACTAGTAAACCAGGG  50
      | |||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTAAATTACTTAGTGTAGAAACGTAATACACACTAGTAAACCAGGG  50

seq1  GAGATTGTCCTTTTAAACCTAGCTAGAAAGTATTAGATTTACTGGATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGTCCTTTTAAACCTAGCTAGAAAGTATTAGATTTACTGGATCAA  100

seq1  TCAAATGGGGAGTTGTTTAAAAGCAACCAAAAACAAAACAAAGAATTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGGGGAGTTGTTTAAAAGCAACCAAAAACAAAACAAAGAATTTGG  150

seq1  GAATTCAAGGCCGTACTTCTGTACCTTTCTTTTCTGCGCTGAGGAGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCGTACTTCTGTACCTTTCTTTTCTGCGCTGAGGAGTCTT  200

seq1  GTTTTTCCAGGCCCAGATCATTATTGCTTAATGAGCCTTTCCTGATAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCCAGGCCCAGATCATTATTGCTTAATGAGCCTTTCCTGATAAAC  250

seq1  AGCTTTTCTTTTCCAGGGAATATTGGAGCCCAAATGGCTAAGCAGAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTCTTTTCCAGGGAATATTGGAGCCCAAATGGCTAAGCAGAAGGA  300

seq1  ATGTTCCACGGAGGATGGGGTGTAGTGGATTCCTGACGACAACCCCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCACGGAGGATGGGGTGTAGTGGATTCCTGACGACAACCCCTTCC  350

seq1  CCTCCCCCATTTTAATGAGAGGGTGGAACTGCTCCTTAAACAGACCGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCATTTTAATGAGAGGGTGGAACTGCTCCTTAAACAGACCGTAC  400

seq1  TAGATGATAATGAGAATTC  419
      |||||||||||||||||||
seq2  TAGATGATAATGAGAATTC  419