BAC Information

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BAC

Clone NameB6Ng01-187H21
Chromosome15 (Build37)
Map Location 47,907,215 - 47,907,768
singlet/doubletsinglet
Overlap geneCsmd3
Upstream geneLOC665130, LOC100039485, LOC100039493
Downstream geneEG665146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187H21.bB6Ng01-187H21.g
ACCGA012057GA012058
length548849
definitionB6Ng01-187H21.b B6Ng01-187H21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttcacgattatattacaggattgtctataaatatcataggatatatgaaa
actttttaaaattagtgtttttaacttttcaattattaagtgtgcacacg
aatgtatagttctaatattagagaaaaatctacaattatatgtactattg
tttatactacattttctttgtaattatccttttatcattaccagtataat
agcatttaatagtgtacatagaatctttagacaaaaacgtactttcaata
ttttacgcagcataaaagattgatattctgagaggttatactattttttt
tgagatcacaaaagaacaatatgaactaaccagtacccccagagctccca
gggactaaaacaccaaccaaagtgtatacatggagggacccatgactcca
gcttcatacatagcagaggatggccttgttgaacaccaatgggagaagag
gcctttagtcctgagaaatctcaatgccccagtgtaggggaatgccaaaa
cagggaatcaggagtgagtgggttggtgagcaggaggagaggaggggg

gaattcctaggatacaatccacacaactcaagaaggctaacaagcaaaag
aacccaagtgaggatgtttcaatcccactttggagagaaaaaaaaaaaac
aatcacaggaggcagagggagggacctgagtgggagaagagagggggagg
gaaaaggaggaacagaacaggagagaaggcaaatcaaaactactctgaga
tgccaacttagagctgtcaaaatggctaaggtcaataacacaagtgacag
ctcatgatgataaggatgtgggaccagggaagtactactccattgctgtt
aatagtgcacacttgtacagccaccatggaaatcaatatgtcaattcctt
agaatgttgggaatcaatcttgctcaagtttcaggtatatcaatcaggga
tatactgaacagatgctccatgcataccacagaggacacttgctcaacca
ggttcctttctacactgtttataataccctaaaacttgaaatgaaccaaa
tgtctctcaacaaaagaatggataaagaaaatgcacagtagattattact
ctgctgtaaaaaatatgagatcatgaagttagcaaaaattggatggagct
agaaaaaatgatcctgagtatggtaagtcagacattgaaagataaatttc
ctatacatttacttatatctggattattagctattacataagtgacaacc
aaccttctatctgtagacccatagagatcagatatagaggaagagaatag
tagatacatggatattccaaggaggggaaaatagaatatatttgtgggtt
ggactcggggcagtggagatgttaaccaaaattatatggtgataagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_47907215_47907768
seq2: B6Ng01-187H21.b_47_600 (reverse)

seq1  CCCCCTCCTCTCCTCCTGCTCACCAACCCACTCACTCCTGATTCCCTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCTCTCCTCCTGCTCACCAACCCACTCACTCCTGATTCCCTGTT  50

seq1  TTGGCATTCCCCTACACTGGGGCATTGAGATTTCTCAGGACTAAAGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATTCCCCTACACTGGGGCATTGAGATTTCTCAGGACTAAAGGCCT  100

seq1  CTTCTCCCATTGGTGTTCAACAAGGCCATCCTCTGCTATGTATGAAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCCATTGGTGTTCAACAAGGCCATCCTCTGCTATGTATGAAGCTG  150

seq1  GAGTCATGGGTCCCTCCATGTATACACTTTGGTTGGTGTTTTAGTCCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATGGGTCCCTCCATGTATACACTTTGGTTGGTGTTTTAGTCCCTG  200

seq1  GGAGCTCTGGGGGTACTGGTTAGTTCATATTGTTCTTTTGTGATCTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCTGGGGGTACTGGTTAGTTCATATTGTTCTTTTGTGATCTCAAA  250

seq1  AAAAATAGTATAACCTCTCAGAATATCAATCTTTTATGCTGCGTAAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAGTATAACCTCTCAGAATATCAATCTTTTATGCTGCGTAAAATA  300

seq1  TTGAAAGTACGTTTTTGTCTAAAGATTCTATGTACACTATTAAATGCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGTACGTTTTTGTCTAAAGATTCTATGTACACTATTAAATGCTAT  350

seq1  TATACTGGTAATGATAAAAGGATAATTACAAAGAAAATGTAGTATAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGGTAATGATAAAAGGATAATTACAAAGAAAATGTAGTATAAACA  400

seq1  ATAGTACATATAATTGTAGATTTTTCTCTAATATTAGAACTATACATTCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTACATATAATTGTAGATTTTTCTCTAATATTAGAACTATACATTCG  450

seq1  TGTGCACACTTAATAATTGAAAAGTTAAAAACACTAATTTTAAAAAGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCACACTTAATAATTGAAAAGTTAAAAACACTAATTTTAAAAAGTTT  500

seq1  TCATATATCCTATGATATTTATAGACAATCCTGTAATATAATCGTGAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATATCCTATGATATTTATAGACAATCCTGTAATATAATCGTGAAGA  550

seq1  ATTC  554
      ||||
seq2  ATTC  554


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