BAC Information

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BAC

Clone NameB6Ng01-190E11
Chromosome15 (Build37)
Map Location 21,094,613 - 21,095,632
singlet/doubletsinglet
Overlap geneCdh12
Upstream geneAcot10, LOC100040302
Downstream geneLOC100040351
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190E11.bB6Ng01-190E11.g
ACCGA014073GA014074
length1,2371,013
definitionB6Ng01-190E11.b B6Ng01-190E11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagttcctcctgtaccatgccttcgtggatattgctatgttcc
caccttgataatacgggactgaatctctgaatctgtaaagcagccccaat
taatattgtccttcatatgacttgcctagatcatggtatctgttcacagc
agtaaaaacccaactaagaaactagcaatacatgtataaatctcattttg
aagcatcctttaattgcccttaataatatatttgtttatggcattgaaat
ttaaaaatataatgactattatcttagtcaccatgaccaaggagactttt
atatgagaaagcaattaattggaggcttatttacagtttaaaaggtgtag
tcagtctggcggttcctcagaaaattggacatagtactaccagaggatct
cacaatacctctcctgggcatatatccagaagatcttccaactgataaga
aggacacatgttccactatgttcatagcagccttatttataatagccaga
agctggaaagaacccagatgcccctcaacagaggaatggatacagaaaat
atggtacatttgcacaatggagtactactcagctattaaaaagaatgaat
ttatgaaattcctaggcaaatggatggacctggagggcatcatcctgagt
gaggtaacccaatcacaaaagaaatctcacaatatgtactcactgataag
tagatattagcccagaaacttagaatacccaagatataagatacaatttg
ctaaactcatgaaactgaagaagaatgaagaccaaagtgtggacactttg
ccccttctcagaattgggaacaaaacacccatggaaggagttacagagac
aaagtttggagctgagacgagaggatggaccatctagagactgccatatc
tggtgatccatcccataatcagcttccaaacgatgacaccattgcataca
ttagcaagattttgctgaaaggacccagatatggctatctcttgagagac
tatgccagggcctggcagacatagaagtgaatgatcacagtcagctattg
gatggatcacaggccccaatggaggagctagagaaagtaccaggagctga
aggatctgcatcctataggtgaacaacaatattgaacttacaatacctgc
ccccccccccccgaagctgttcttagctgcatatgccagagaccagaacc
tggaatggatgttgagtgtgggaaacactcgcgcgtc

gaattccagacaaacacaggatactagggagagagccacaaattaagttt
gtactgaatatgtagatggcagtacatagaaacatagtcttggggtaatt
ggcagactattagaaaaataaaaaccagacacaaatagcatgacttgtgc
acttaaggtaagaaatttaagttaggagagaaaaaaagagagatgaacag
acgtcctggaatggtagcctgtttattctgatcactgctgcctgatgggc
tctatttaaattttctaaaaatgtcagttttgatgatacctatggctata
atcattatcgtcatcatcattaccaccaccaccaccaccaccaccactgt
ctttcttgacatagcaaatcagggtgattccaatttgaaattatttttat
gagtgtactttgtgtgtgtgtgtgtgcatgtatgcactcatatatatata
tatgtatgtatgtatgtatatagcagggatgcatgtatatttgcatgttt
acatgtattagtgaatgtctgggttatgaggtgcatacgcagaggccaaa
ggtcagccttaaatgttactctacataatagcaccccctttcattgagac
aggcagttttattgaccggagctcaccacttagagcagattggtggccag
caagctcttagagtcatatactccttctcaacagagcaagaatgccaatt
acctaccaccatgccctgcttctctctttgttgttgtttgtgtttgattt
tgttacatgagttctgtacaacaaactcaggttctcattgtgatgcaagc
actttgctagttgtgctgaccaatcttgctttggctggatgtggacttaa
ctaaaacacaatccaaggtccaaaggcgttgctgtatggattatcttaat
cagatattaaagcaggaagatgcattcgaaacatggtgtcatcttctggt
attagttcaaatacaaggacactgagagaaacttagctctcatctgctgc
cttcactctgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_21094613_21095632
seq2: B6Ng01-190E11.g_63_1075

seq1  GAATTCCAGACAAACACAGGATACTAGGGAGAGAGCCACAAATTAAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACAAACACAGGATACTAGGGAGAGAGCCACAAATTAAGTTT  50

seq1  GTACTGAATATGTAGATGGCAGTACATAGAAACATAGTCTTGGGGTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGAATATGTAGATGGCAGTACATAGAAACATAGTCTTGGGGTAATT  100

seq1  GGCAGACTATTAGAAAAATAAAAACCAGACACAAATAGCATGACTTGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACTATTAGAAAAATAAAAACCAGACACAAATAGCATGACTTGTGC  150

seq1  ACTTAAGGTAAGAAATTTAAGTTAGGAGAGAAAAAAAGAGAGATGAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGGTAAGAAATTTAAGTTAGGAGAGAAAAAAAGAGAGATGAACAG  200

seq1  ACGTCCTGGAATGGTAGCCTGTTTATTCTGATCACTGCTGCCTGATGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCCTGGAATGGTAGCCTGTTTATTCTGATCACTGCTGCCTGATGGGC  250

seq1  TCTATTTAAATTTTCTAAAAATGTCAGTTTTGATGATACCTATGGCTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTAAATTTTCTAAAAATGTCAGTTTTGATGATACCTATGGCTATA  300

seq1  ATCATTATCGTCATCATCATTACCACCACCACCACCACCACCACCACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTATCGTCATCATCATTACCACCACCACCACCACCACCACCACTGT  350

seq1  CTTTCTTGACATAGCAAATCAGGGTGATTCCAATTTGAAATTATTTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGACATAGCAAATCAGGGTGATTCCAATTTGAAATTATTTTTAT  400

seq1  GAGTGTACTTTGTGTGTGTGTGTGTGCATGTATGCACTCATATATATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTACTTTGTGTGTGTGTGTGTGCATGTATGCACTCATATATATATA  450

seq1  TATGTATGTATGTATGTATATAGCAGGGATGCATGTATATTTGCATGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGTATGTATGTATATAGCAGGGATGCATGTATATTTGCATGTTT  500

seq1  ACATGTATTAGTGAATGTCTGGGTTATGAGGTGCATACGCAGAGGCCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTATTAGTGAATGTCTGGGTTATGAGGTGCATACGCAGAGGCCAAA  550

seq1  GGTCAGCCTTAAATGTTACTCTACATAATAGCACCCCCTTTCATTGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGCCTTAAATGTTACTCTACATAATAGCACCCCCTTTCATTGAGAC  600

seq1  AGGCAGTTTTATTGACCGGAGCTCACCACTTAGAGCAGATTGGTGGCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGTTTTATTGACCGGAGCTCACCACTTAGAGCAGATTGGTGGCCAG  650

seq1  CAAGCTCTTAGAGTCATATACTCCTTCTCAACAGAGCAAGAATGCCAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTCTTAGAGTCATATACTCCTTCTCAACAGAGCAAGAATGCCAATT  700

seq1  ACCTACCACCATGCCCTGCTTCTCTCTTTGTTGTTGTTTGTGTTTGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACCACCATGCCCTGCTTCTCTCTTTGTTGTTGTTTGTGTTTGATTT  750

seq1  TGTTACATGAGTTCTGTACAACAAACTCAGGTTCTCATTGTGATGCAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACATGAGTTCTGTACAACAAACTCAGGTTCTCATTGTGATGCAAGC  800

seq1  ACTTTGCTAGTTGTGCTGACCAATCTTGCTTTGGCTGGATGTGGACTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGCTAGTTGTGCTGACCAATCTTGCTTTGGCTGGATGTGGACTTAA  850

seq1  CTAAAACACAATCCAAGGTCC-AAGGCGTTGCTGTATGGATTATCTTAAT  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTAAAACACAATCCAAGGTCCAAAGGCGTTGCTGTATGGATTATCTTAAT  900

seq1  CAGAATATTAAAGCAGGAAGATGCATTCGAAACATGGGTGTCATCTTCTG  949
      ||| ||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAG-ATATTAAAGCAGGAAGATGCATTCGAAACAT-GGTGTCATCTTCTG  948

seq1  GTATTAGTTCAAATACAAGGACACTGAAGAAGGAAACTTAGCCTCTCATC  999
      |||||||||||||||||||||||||| |||  ||||||||| ||||||||
seq2  GTATTAGTTCAAATACAAGGACACTG-AGA--GAAACTTAG-CTCTCATC  994

seq1  TGCCTGCCTTCACTCTTGCTG  1020
      || |||||||||||| |||||
seq2  TG-CTGCCTTCACTC-TGCTG  1013


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