BAC Information

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BAC

Clone NameB6Ng01-192I16
Chromosome15 (Build37)
Map Location 76,115,749 - 76,267,185
singlet/doubletdoublet
Overlap geneSpatc1, LOC100041269, Oplah, Exosc4, Gpaa1, Cyc1, Sharpin, Maf1, EG626280, Brp16, Tssk5
Upstream geneLOC100041652, LOC100041107, 9030619P08Rik, Ly6h, Gpihbp1, Zfp41, 2810039B14Rik, Top1mt, Rhpn1, Mafa, Zc3h3, LOC672572, Gsdmdc1, Naprt1, Eef1d, Tigd5, Pycrl, Tsta3, Zfp623, Eif2s3x-ps1, Zfp707, 2410075B13Rik, Mapk15, AA409316, K230010J24Rik, Scrib, 2410104I19Rik, Nrbp2, Eppk1, BC024139, Plec1, LOC671535, Grina
Downstream geneBop1, Scx, Hsf1, Dgat1, Scrt1, LOC666497, EG666504, Fbxl6, Gpr172b, Adck5, Cpsf1, Slc39a4, Vps28, Nfkbil2, Cyhr1, Kifc2, Foxh1, Ppp1r16a, Gpt1, Mfsd3, Recql4, Lrrc14, Lrrc24, C030006K11Rik, D15Wsu169e, Zfp251, Zfp7, Commd5, Rpl8, Zfp647, 1110038F14Rik, Mb, Apol6, Rbm9, LOC100042318, Apol3, BC020489, BC085284
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192I16.bB6Ng01-192I16.g
ACCGA015756GA015757
length1,137975
definitionB6Ng01-192I16.b B6Ng01-192I16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,266,047 - 76,267,185)(76,115,749 - 76,116,714)
sequence
gaattcactgagggaggggctaatttggctatccttggagccctgctggc
ctccagactagacatctatctggctgggtggttcaggctggatatggtac
ccagggcgtgtgatacacaggacaggaaagagacattttagcccagtgtt
gcacttccaaatgcagtggacaaaatgcctcagcctcctgggacccaaga
tggggcccatgctggaccatgaatgtggctctgagcagttgtcagctctg
ggtgggacactcacataaacaccagcaccatgccctccatctctagaaac
ccacgaagtcttcactaaggaagctgggggcaggcggcagacagctgtac
agccagatgcatctcaaagtattcagagccctcttgggcatcctccaaca
cttcaccattgagcataccttgatcctgcccagactgtggtaccccgaag
caggcaggtatgggagacatggcagtttggaccaaatgggtcaccaaaca
ccaattccttgaatgaaacctgctcacagctgcccctctgggcctgctga
gtgagagaggtaccaagtgcttccttggcagtcccttagccccaggcgct
gcagtccctccttctcattgctgggatcccataagtacctgggctatgct
gtggcaagtgtggaaaaggatggtgggatcagcgttcacaaggccatcct
gcagggtgaggagccgctcggccacatcatcacgatggtctcgggagaag
cctaaggaccagagtcgactgaagccttccccagtgattccagtctgacc
ccacacccaactcctgcctccacggtccccacatccccagcagggctcac
tctcatagcccagctgcaagtagagcaggaatagacacagcccacggctt
tctggcgggtggtagtccatgtgtccgcacaccgtggaagcaaagagacc
gaccaggagacccaaggttgtggaaggtaccaattgtcttgcagggagat
ggaaggggggttagggcttgtcaggatttctggggatagttaccccagct
ttttatcagtagactagaggggggctatgtggactggacaacgtttctct
tcaaatatagtcctacttggctccttaagtatgggag
gaattctatagcccgctgcctccagcatccccagtgctcactgagaacac
cacagggaactggcaagggggtaaggactggggatatgggtctgcacttg
gctggatacccctgccatatgagaccatgcagggcctatccctgtataca
tttgagcttttctcagcgggaaaatggctttccagctgcttattctctta
ggccatctttgtgtacaaattatgttgtaatgacttctgattgcacaggc
tgttttttaaattttgtttaatgtatgagtgctctgctgcatatacatcc
acctgcctgaagggggcatcatatccccctatagatggtcgtaagccacc
atgtgattgctgggaattgagctcatgacctctggaagagcagtcagtgc
tcttaaccactgagttatctcaccagctccacaggctgattcttagcttg
ccttttcttggctaaagtgtcctttcactagatacaattttttgtttgtc
tgtttgtttgtttgtttgtttgtttgtttgttttttgagacagggttcct
ctgtatagccctggctgtcctggaactcactctgttagaccaggctagcc
tcaaaactcagaaatcctcctgcctctgcctcccaagtgctgggattaaa
ggcaggctccactgtgcttagtttagataattaatttgaatgtgttcaga
aatgtcagtctttcctcacgtttatttgtatttgtcttcaattaagaaac
tctcccctagctgggtggtctacaatgtgcaatccagggcagagaggagc
tgcacagagaatccctgtctcaggaaaggaaaaaaaaaaaaagaaaggaa
agtaatatgatagaatgatagatagtagaacgaaaggaatgaaagaaaga
aagaaaagaaagaattcttcccctagcagaaaacttcctgaaactatttt
ggtattcccttaagtcaacattttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_76266047_76267185
seq2: B6Ng01-192I16.b_44_1180 (reverse)

seq1  CTCCCTATACTTAGGGAGCCAGGT-GGACTATATGTGAAGAGGAAACGTT  49
      ||||| ||||||| ||||||| || ||||||||| |||||| |||||| |
seq2  CTCCC-ATACTTAAGGAGCCAAGTAGGACTATATTTGAAGA-GAAACG-T  47

seq1  TGTCCAGGCCACATAGCCCCCCTCTAGGTCCTACTGAT-AAAGGCTGGGG  98
      ||||||| |||||||||||||||||||   |||||||| ||| |||||||
seq2  TGTCCAGTCCACATAGCCCCCCTCTAG--TCTACTGATAAAAAGCTGGGG  95

seq1  TTGACTATTCCCCCAG-AATCCTGAC-AGCCCTACCCCCCCTTCCATCTC  146
       | |||||  |||||| ||||||||| ||||||| |||||||||||||||
seq2  -TAACTAT--CCCCAGAAATCCTGACAAGCCCTAACCCCCCTTCCATCTC  142

seq1  CCTGC-AGAC-ATTGGTACCCTTCCACAACC-TGGGTCTCCTGGTCGGTC  193
      ||||| |||| ||||||| |||||||||||| ||||||||||||||||||
seq2  CCTGCAAGACAATTGGTA-CCTTCCACAACCTTGGGTCTCCTGGTCGGTC  191

seq1  TCTTTGC-TCCACGGTGTGCGGACACATGGACTACCACCCGCCAGAAAGC  242
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTTCCACGGTGTGCGGACACATGGACTACCACCCGCCAGAAAGC  241

seq1  CGTGGGCTGTGTCTATTCCCTGCTCTACTTGCAGCTGGGCTATGAGGGTG  292
      ||||||||||||||||| |||||||||||||||||||||||||||| |||
seq2  CGTGGGCTGTGTCTATT-CCTGCTCTACTTGCAGCTGGGCTATGAGAGTG  290

seq1  AGCCCTGCTGGGGATGTGGGGACCGTGGAGGCAGGAGTTGGGTGTGGGGT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGCTGGGGATGTGGGGACCGTGGAGGCAGGAGTTGGGTGTGGGGT  340

seq1  CAGACTGGAATCACTGGGGAAGGCTTCAGTCGACTCTGGTCCTTAGGCTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGGAATCACTGGGGAAGGCTTCAGTCGACTCTGGTCCTTAGGCTT  390

seq1  CTCCCGAGACCATCGTGATGATGTGGCCGAGCGGCTCCTCACCCTGCAGG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCGAGACCATCGTGATGATGTGGCCGAGCGGCTCCTCACCCTGCAGG  440

seq1  ATGGCCTTGTGAACGCTGATCCCACCATCCTTTTCCACACTTGCCACAGC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTTGTGAACGCTGATCCCACCATCCTTTTCCACACTTGCCACAGC  490

seq1  ATAGCCCAGGTACTTATGGGATCCCAGCAATGAGAAGGAGGGACTGCAGC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCCAGGTACTTATGGGATCCCAGCAATGAGAAGGAGGGACTGCAGC  540

seq1  GCCTGGGGCTAAGGGACTGCCAAGGAAGCACTTGGTACCTCTCTCACTCA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGGCTAAGGGACTGCCAAGGAAGCACTTGGTACCTCTCTCACTCA  590

seq1  GCAGGCCCAGAGGGGCAGCTGTGAGCAGGTTTCATTCAAGGAATTGGTGT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCCCAGAGGGGCAGCTGTGAGCAGGTTTCATTCAAGGAATTGGTGT  640

seq1  TTGGTGACCCATTTGGTCCAAACTGCCATGTCTCCCATACCTGCCTGCTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGACCCATTTGGTCCAAACTGCCATGTCTCCCATACCTGCCTGCTT  690

seq1  CGGGGTACCACAGTCTGGGCAGGATCAAGGTATGCTCAATGGTGAAGTGT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGTACCACAGTCTGGGCAGGATCAAGGTATGCTCAATGGTGAAGTGT  740

seq1  TGGAGGATGCCCAAGAGGGCTCTGAATACTTTGAGATGCATCTGGCTGTA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGATGCCCAAGAGGGCTCTGAATACTTTGAGATGCATCTGGCTGTA  790

seq1  CAGCTGTCTGCCGCCTGCCCCCAGCTTCCTTAGTGAAGACTTCGTGGGTT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTCTGCCGCCTGCCCCCAGCTTCCTTAGTGAAGACTTCGTGGGTT  840

seq1  TCTAGAGATGGAGGGCATGGTGCTGGTGTTTATGTGAGTGTCCCACCCAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGATGGAGGGCATGGTGCTGGTGTTTATGTGAGTGTCCCACCCAG  890

seq1  AGCTGACAACTGCTCAGAGCCACATTCATGGTCCAGCATGGGCCCCATCT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACAACTGCTCAGAGCCACATTCATGGTCCAGCATGGGCCCCATCT  940

seq1  TGGGTCCCAGGAGGCTGAGGCATTTTGTCCACTGCATTTGGAAGTGCAAC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCCCAGGAGGCTGAGGCATTTTGTCCACTGCATTTGGAAGTGCAAC  990

seq1  ACTGGGCTAAAATGTCTCTTTCCTGTCCTGTGTATCACACGCCCTGGGTA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCTAAAATGTCTCTTTCCTGTCCTGTGTATCACACGCCCTGGGTA  1040

seq1  CCATATCCAGCCTGAACCACCCAGCCAGATAGATGTCTAGTCTGGAGGCC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATCCAGCCTGAACCACCCAGCCAGATAGATGTCTAGTCTGGAGGCC  1090

seq1  AGCAGGGCTCCAAGGATAGCCAAATTAGCCCCTCCCTCAGTGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGCTCCAAGGATAGCCAAATTAGCCCCTCCCTCAGTGAATTC  1137

seq1: chr15_76115749_76116714
seq2: B6Ng01-192I16.g_68_1042

seq1  GAATTCTATAGCCCGCTGCCTCCAGCATCCCCAGTGCTCACTGAGAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAGCCCGCTGCCTCCAGCATCCCCAGTGCTCACTGAGAACAC  50

seq1  CACAGGGAACTGGCAAGGGGGTAAGGACTGGGGATATGGGTCTGCACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGAACTGGCAAGGGGGTAAGGACTGGGGATATGGGTCTGCACTTG  100

seq1  GCTGGATACCCCTGCCATATGAGACCATGCAGGGCCTATCCCTGTATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATACCCCTGCCATATGAGACCATGCAGGGCCTATCCCTGTATACA  150

seq1  TTTGAGCTTTTCTCAGCGGGAAAATGGCTTTCCAGCTGCTTATTCTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCTTTTCTCAGCGGGAAAATGGCTTTCCAGCTGCTTATTCTCTTA  200

seq1  GGCCATCTTTGTGTACAAATTATGTTGTAATGACTTCTGATTGCACAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCTTTGTGTACAAATTATGTTGTAATGACTTCTGATTGCACAGGC  250

seq1  TGTTTTTTAAATTTTGTTTAATGTATGAGTGCTCTGCTGCATATACATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTAAATTTTGTTTAATGTATGAGTGCTCTGCTGCATATACATCC  300

seq1  ACCTGCCTGAAGGGGGCATCATATCCCCCTATAGATGGTCGTAAGCCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCTGAAGGGGGCATCATATCCCCCTATAGATGGTCGTAAGCCACC  350

seq1  ATGTGATTGCTGGGAATTGAGCTCATGACCTCTGGAAGAGCAGTCAGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATTGCTGGGAATTGAGCTCATGACCTCTGGAAGAGCAGTCAGTGC  400

seq1  TCTTAACCACTGAGTTATCTCACCAGCTCCACAGGCTGATTCTTAGCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACCACTGAGTTATCTCACCAGCTCCACAGGCTGATTCTTAGCTTG  450

seq1  CCTTTTCTTGGCTAAAGTGTCCTTTCACTAGATACAATTTTTTGTTTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCTTGGCTAAAGTGTCCTTTCACTAGATACAATTTTTTGTTTGTC  500

seq1  TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTGAGACAGGGTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTTTTGAGACAGGGTTCCT  550

seq1  CTGTATAGCCCTGGCTGTCCTGGAACTCACTCTG-TAGACCAGGCTAGCC  599
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTTAGACCAGGCTAGCC  600

seq1  TC-AAACTCAGAAATCCTCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAA  648
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACTCAGAAATCCTCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAA  650

seq1  GGCAGGCTCCACTGTGCTTAGTTTAGATAATTAATTTGAATGTGTTCAGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCTCCACTGTGCTTAGTTTAGATAATTAATTTGAATGTGTTCAGA  700

seq1  AATGTCAGTCTTTCCTCACG-TTATTTGTA-TTGTC-TCAATTAAGAAAC  745
      |||||||||||||||||||| ||||||||| ||||| |||||||||||||
seq2  AATGTCAGTCTTTCCTCACGTTTATTTGTATTTGTCTTCAATTAAGAAAC  750

seq1  TCTCCCCTAGCTGGGTGGTCTACAATGTGCAATCCAGGGCAGAGAGGAGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCTAGCTGGGTGGTCTACAATGTGCAATCCAGGGCAGAGAGGAGC  800

seq1  TGCACAGAGAATTCCTGTCTCAGGAAAAGAAAAAAAAAAAAAGAAAAGAA  845
      |||||||||||| |||||||||||||| |||||||||||||||||| |||
seq2  TGCACAGAGAATCCCTGTCTCAGGAAAGGAAAAAAAAAAAAAGAAAGGAA  850

seq1  AAGAA-AAGAAAGAAAGAAAGAAAGAAAGAAAGAAA-GAAAGAAAGAAAG  893
      |  || | || |||| || ||| ||  |||| |||| ||| |||||||||
seq2  AGTAATATGATAGAATGATAGATAG-TAGAACGAAAGGAATGAAAGAAAG  899

seq1  AAAAGAAAAAGAAAGAAATCTTCCCCTAGCAGAAA--CTCCTGAAACTAT  941
      |||   ||||||||||| |||||||||||||||||   ||||||||||||
seq2  AAA--GAAAAGAAAGAATTCTTCCCCTAGCAGAAAACTTCCTGAAACTAT  947

seq1  TTT-GTATTCC--TTAGTCAACATTTTC  966
      ||| |||||||  | |||||||||||||
seq2  TTTGGTATTCCCTTAAGTCAACATTTTC  975