MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-198C14
Chromosome	15 (Build37)
Map Location	87,911,108 - 88,075,846
singlet/doublet	doublet
Overlap gene	none
Upstream gene	AW049604, LOC100042329, LOC100042340
Downstream gene	Zdhhc25, Brd1, Zbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1, Panx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik, Saps2
Link	Open Mouse BAC browser

Click to get alignment info.

name	AW049604 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106014 MGI:2146182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042329 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042329
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100042340 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042340
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Zdhhc25 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70073 MGI:1917323
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Brd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223770 MGI:1924161
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zbed4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223773 MGI:2682302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Alg12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223774 MGI:2385025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Creld2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76737 MGI:1923987
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pim3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223775 MGI:1355297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700019P01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239591 MGI:1922902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mlc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170790 MGI:2157910
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667558 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins pseudo : _no_value

name	Mov10l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83456 MGI:1891384
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Panx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:406218 MGI:1890615
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trabd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67976 MGI:1915226
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1300018J18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223776 MGI:1919007
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hdac10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170787 MGI:2158340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mapk12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:29857 MGI:1353438
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mapk11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19094 MGI:1338024
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plxnb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140570 MGI:2154239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 493 ESTs, 11 Proteins

name	LOC100043185 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	1700027J05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69440 MGI:1916690
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Saps2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71474 MGI:1918724
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	AW049604 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54792125 GeneID:106014 MGI:2146182
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW049604 transcript_id : NM_134096.2

name	LOC100042329 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266723 GeneID:100042329
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100042329 transcript_id : XM_001477952.1

name	LOC100042340 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266728 GeneID:100042340
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042340 transcript_id : XM_001477997.1

name	Zdhhc25 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037194 GeneID:70073 MGI:1917323
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, DHHC domain containing 25 transcript_id : NM_027306.1

name	Brd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801806 GeneID:223770 MGI:1924161
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain containing 1 transcript_id : NM_001033274.2

name	Zbed4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326492 GeneID:223773 MGI:2682302
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, BED domain containing 4 transcript_id : NM_181412.3

name	Alg12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703941 GeneID:223774 MGI:2385025
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : asparagine-linked glycosylation 12 homolog (yeast, alpha-1,6-mannosyltransferase) transcript_id : NM_145477.1

name	Creld2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372255 GeneID:76737 MGI:1923987
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine-rich with EGF-like domains 2 transcript_id : NM_029720.2

name	Pim3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130143 GeneID:223775 MGI:1355297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proviral integration site 3 transcript_id : NM_145478.2

name	1700019P01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357245 GeneID:239591 MGI:1922902
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700019P01 gene transcript_id : NM_172818.2

name	Mlc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126722621 GeneID:170790 MGI:2157910
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : megalencephalic leukoencephalopathy with subcortical cysts 1 homolog (human) transcript_id : NM_133241.2

name	Mov10l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13994126 GeneID:83456 MGI:1891384
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Moloney leukemia virus 10-like 1 transcript_id : NM_031260.1

name	Panx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50284540 GeneID:406218 MGI:1890615
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pannexin 2 transcript_id : NM_001002005.1

name	Trabd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606382 GeneID:67976 MGI:1915226
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TraB domain containing transcript_id : NM_026485.2

name	1300018J18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:81295806 GeneID:223776 MGI:1919007
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1300018J18 gene transcript_id : NM_027905.2

name	Hdac10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40353217 GeneID:170787 MGI:2158340
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : histone deacetylase 10 transcript_id : NM_199198.1

name	Mapk12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980730 GeneID:29857 MGI:1353438
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase 12 transcript_id : NM_013871.2

name	Mapk11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40789283 GeneID:19094 MGI:1338024
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase 11 transcript_id : NM_011161.4

name	Plxnb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149266785 GeneID:140570 MGI:2154239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 493 ESTs, 11 Proteins product : plexin B2, transcript variant 14 transcript_id : XM_001003435.2

name	LOC100043185 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149266786 GeneID:100043185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100043185 transcript_id : XM_001480330.1

name	1700027J05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400913 GeneID:69440 MGI:1916690
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700027J05 gene transcript_id : NM_027081.3

name	Saps2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54145495 GeneID:71474 MGI:1918724
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SAPS domain family, member 2 transcript_id : NM_026813.1

name	Saps2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:53832031 GeneID:71474 MGI:1918724
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SAPS domain family, member 2 transcript_id : NM_027805.2

name	AW049604 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527326 GeneID:106014 MGI:2146182
definition	codon_start : 1 product : TAFA5 protein protein_id : NP_598857.1

name	LOC100042329 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266724 GeneID:100042329
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478002.1

name	LOC100042340 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266729 GeneID:100042340
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478047.1

name	Zdhhc25 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037195 GeneID:70073 MGI:1917323
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger, DHHC domain containing 25 protein_id : NP_081582.1

name	Brd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701782 CCDS:CCDS27730.1 GeneID:223770 MGI:1924161
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : mismatches in translation product : bromodomain containing 1 protein_id : NP_001028446.1

name	Zbed4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088890 CCDS:CCDS27731.1 GeneID:223773 MGI:2682302
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0046983 - protein dimerization activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : zinc finger, BED domain containing 4 protein_id : NP_852077.1

name	Alg12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703942 CCDS:CCDS27732.1 GeneID:223774 MGI:2385025
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0000030 - mannosyltransferase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0006488 - dolichol-linked oligosaccharide biosynthesis [Evidence ISS] codon_start : 1 note : mannosyltransferase product : alpha-1,6-mannosyltransferase ALG12 protein_id : NP_663452.1

name	Creld2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313278 CCDS:CCDS27733.1 GeneID:76737 MGI:1923987
definition	codon_start : 1 product : cysteine-rich with EGF-like domains 2 protein_id : NP_083996.1

name	Pim3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703944 CCDS:CCDS27734.1 GeneID:223775 MGI:1355297
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : KID-1/kinase induced by depolarization product : serine/threonine-protein kinase pim-3 protein_id : NP_663453.1

name	1700019P01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370222 CCDS:CCDS27735.1 GeneID:239591 MGI:1922902
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA] codon_start : 1 note : TTL domain protein product : hypothetical protein LOC239591 protein_id : NP_766406.1

name	Mlc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875410 GeneID:170790 MGI:2157910
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA] codon_start : 1 product : megalencephalic leukoencephalopathy with subcortical cysts 1 protein_id : NP_573504.1

name	Mov10l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13994127 CCDS:CCDS27737.1 GeneID:83456 MGI:1891384
definition	GO_component : GO:0005622 - intracellular [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence ISS] [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence ISS] GO_process : GO:0008283 - cell proliferation [Evidence IDA]; GO:0007275 - development [Evidence IEA]; GO:0007517 - muscle development [Evidence IDA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IDA]; GO:0007283 - spermatogenesis [Evidence ISS] codon_start : 1 exception : mismatches in translation product : Moloney leukemia virus 10-like 1 protein_id : NP_112550.1

name	Panx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50284541 GeneID:406218 MGI:1890615
definition	GO_component : GO:0005921 - gap junction [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : pannexin 2 protein_id : NP_001002005.1

name	Trabd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606383 GeneID:67976 MGI:1915226
definition	codon_start : 1 product : TraB domain containing protein_id : NP_080761.2

name	1300018J18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:81295807 CCDS:CCDS27738.1 GeneID:223776 MGI:1919007
definition	GO_function : GO:0008430 - selenium binding [Evidence IEA] codon_start : 1 product : selenoprotein O protein_id : NP_082181.2 transl_except : (pos:88930405..88930407,aa:Sec)

name	Hdac10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40353218 CCDS:CCDS27739.1 GeneID:170787 MGI:2158340
definition	GO_component : GO:0000118 - histone deacetylase complex [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004407 - histone deacetylase activity [Evidence ISS]; GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0016575 - histone deacetylation [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : histone deacetylase 10 protein_id : NP_954668.1

name	Mapk12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305253 CCDS:CCDS27740.1 GeneID:29857 MGI:1353438
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEP] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004707 - MAP kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : stress activated protein kinase 3 product : mitogen-activated protein kinase 12 protein_id : NP_038899.1

name	Mapk11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40789284 CCDS:CCDS27741.1 GeneID:19094 MGI:1338024
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004707 - MAP kinase activity [Evidence IEA]; GO:0008339 - MP kinase activity [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007243 - protein kinase cascade [Evidence ISS] codon_start : 1 exception : mismatches in translation note : protein kinase, mitogen activated kinase, 11, p38beta product : mitogen-activated protein kinase 11 protein_id : NP_035291.3

name	Plxnb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94398834 GeneID:140570 MGI:2154239
definition	codon_start : 1 product : plexin B2 isoform 14 protein_id : XP_001003435.1

name	LOC100043185 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149266787 GeneID:100043185
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480380.1

name	1700027J05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49355814 GeneID:69440 MGI:1916690
definition	codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein LOC69440 protein_id : NP_081357.2

name	LOC667558 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149266784 GeneID:667558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins product : similar to proteasome maturation protein pseudo : _no_value transcript_id : XR_034622.1

clone name	MSMg01-319G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132O10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-513O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385J18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-352F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533K20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-451E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473P05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-324I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027O07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-198C14.b	B6Ng01-198C14.g
ACC	GA019829	GA019830
length	750	1,102
definition	B6Ng01-198C14.b	B6Ng01-198C14.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(87,911,108 - 87,911,856)	(88,074,761 - 88,075,846)
sequence	gaattctttcttaaaagtctcctgttttgcttgctgttgttgagaagtct ccaccaaactctggttccagtacccaagaacttggaagttcttgtgggta ccctttaaacccccccaaatctactgatagcaaagaattctggagactcg atgaaaagcaagaaccttgatatgcaaagctgagtggtcacacaagaaaa gggctgcagcattccaggatggccaagagcagaacccaagactaagaaca gaagaaggatggaggagtgggaaggctggaagagctggagatggagccca gactacaaagattgcagtcctaagtcacaagatggttccagaaagctgtc agggattaaggagccaagggtcccagcatctagagctcagggcctgtagt ttcagctgctggaaattggctctctaagctctaagcaataagcttccgca ttcgaaagcttgaagccctaagccttaagttcttaaggcttttggagcta gaagattcagcttggaagtcctacttgtgagagttgggaattcatggcca ccaacactgaggtggcagtactctggctgtgtgaagtatctatgcagaga ggacaaatgatccagtgtttgtaaagacaccgtccagagaagagacagga ggcagggaaaatagctggatccttggtgctccccagggatgccttaagct cagtggttgctgctaactatggagtcaggggtgggaggtgggggtgagat	gaattctagggcctctctgcaccagccatccttggctagggtccttttca gtaccttgagggtattctctgcaacattatcttgccccctgtgattttgt agaacctgtcccgaggctctgagaaaaaggatggatgagcgtccctgggc ttggatagtgtgatcttgtaggcaaggctctgctccattcagctgtgaag tggttggaggctatagcagccgtgagaggggtcagggaatggaccctccc tcgggatggtgacggctcatgtcgactgctcaaatttccctggagtgtct gggtgctgtaatcagtgcctgtgtgtttgggtgctgttgtctgtcagtgt gtctgggagctgtcatttgtgtcagtgtgactgggtgcttctgccagtgt ctgtgtgtctgggtactgctgtcagtgtctggttgctgctgtctatgtct aggtgcctgagttctgtcattagtatctggtcgccgctgccagggtccct gtgtctgggtgctgttgtcagtgtcattatgcctgggttctaccatcaat gtctgcgtgcgtgcgtgggcgcttcggtctgtgtccatatgtctgcagtt gttagtgtccgcgagacacatttagattgcaatagctcagtgaggcatgc ttagcaaggcacaggcaggggaacagactgaacgcaggacctggtaccac agacatccatgatgggaacactttgtcccatgctggctgtctctcgtacg cctactgtgtttattaacatgccttgttgctagggcagagtatctgatgt aagtaacgtaaggaaatagttttattttggctggaagctgaaggcttcag tctgtcttggtggggaaagggttagcaggagcgtgaggcagctggtcagt atgcagccaggacgctgaagggagaattattgtgcttacttcactttttt tccttcttatgagggaccccaactaaggatgatgcttgaccataattggg atggtgtttccttacccctacctaactctaagaaaattctctccaccagg catgctttgagaaattgttttcaataggtggactctaattcatctcagtt ta
quality values	Open. Hide. 46 23 27 29 62 62 62 62 46 62 62 62 47 62 62 62 47 47 62 62 62 62 62 62 62 62 62 62 59 59 62 62 45 34 27 28 34 43 32 28 28 38 62 56 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 59 59 56 54 38 54 56 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 59 59 59 59 62 62 62 59 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 46 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 47 47 62 62 62 62 62 62 62 54 62 62 62 52 62 54 62 54 54 62 62 62 62 62 62 62 62 62 52 62 62 62 62 58 58 43 45 58 58 54 58 58 58 54 54 52 58 58 54 54 58 54 58 58 58 54 54 58 54 54 58 54 58 54 58 54 54 58 58 58 58 58 58 58 58 52 54 58 58 58 54 54 54 54 45 58 54 54 58 58 58 48 49 58 23 36 46 58 54 52 58 58 51 58 58 46 49 50 38 34 42 45 58 58 58 58 58 51 58 58 58 53 46 42 35 34 58 42 34 58 42 54 41 51 41 58 58 32 58 39 39 23 49 37 58 39 41 58 49 47 47 58 58 58 58 58 32 35 51 48 50 51 58 58 37 40 39 58 51 47 46 39 42 58 51 39 38 39 46 44 28 29 51 58 37 50 52 52 53 51 58 27 58 42 51 51 50 50 41 39 58 38 35 51 58 53 54 51 38 47 40 54 51 54 53 38 54 54 51 39 38 51 37 40 54 39 32 42 54 42 25 21 17 54 29 49 54 54 54 39 21 29 24 9 16 14	Open. Hide. 62 47 47 47 62 62 62 47 62 62 62 27 38 31 27 21 27 32 32 24 32 35 28 28 45 62 49 59 62 62 62 62 62 59 62 62 59 59 59 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 28 28 43 38 32 48 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 59 59 62 62 59 62 62 59 59 62 54 54 49 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 59 62 62 59 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 44 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 42 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 54 54 62 62 62 56 56 62 62 56 56 62 62 62 54 33 38 62 62 62 47 39 62 62 62 62 62 47 47 47 62 62 62 62 62 62 62 62 62 62 62 62 52 46 54 49 62 62 52 62 62 62 62 62 62 62 62 38 47 62 62 54 62 62 62 52 47 54 62 62 62 52 62 62 62 62 38 62 48 58 58 58 54 58 54 52 58 34 58 51 58 58 54 58 58 58 58 54 54 52 52 58 54 37 42 54 54 58 52 54 58 52 58 47 36 29 54 27 52 52 52 54 58 52 52 41 36 26 58 58 52 32 54 52 58 52 54 58 52 51 37 37 42 42 35 54 52 50 52 50 52 58 45 42 30 54 52 42 48 54 40 52 52 47 37 49 46 41 30 54 49 48 58 48 50 46 16 29 31 58 50 58 58 54 52 58 39 39 54 45 42 48 50 51 48 49 34 33 54 42 48 50 37 49 42 37 41 36 36 28 37 36 41 30 25 41 42 50 50 50 50 41 58 58 39 39 34 24 58 50 46 41 51 46 50 52 51 39 52 52 31 39 38 32 41 50 35 26 37 41 39 46 33 39 32 42 29 47 39 49 12 58 10 25 41 36 30 50 37 32 51 37 26 33 35 29 45 29 16 21 29 42 23 24 54 54 32 39 17 51 10 42 30 40 53 52 45 41 26 33 35 32 29 22 32 42 33 45 31 38 39 41 23 30 10 54 10 14 31 32 41 54 54 7 17 34 54 54 29 33 29 32 38 30 29 23 28 19 37 34 29 32 28 18 25 16 51 18 25 21 15 27 32 34 34 28 28 53 27 32 45 32 27 40 40 36 22 53 31 32 47 31 33 38 37 19 32 31 9 32 30 7 42 28 34 31 40 14 31 16 22 6 13 10 6 25 26 21 18 6 9 21 16 12 21 17 8 31 42 18 28 18 26 11 18 34 42 13 23 22 21 32 9 46 14 22 30 6 6 6 27 29 46 18 20 26 17 41 18 6 5 10 11 26 18 11 43 48 48 48 39 7 9 39 19 25 39 30 31 10 8 25 25 10 37 15 24 25 31 31 28 10 21 31 11 6 6 21 25 8 14 17 31 12 22 10 10 6 9 25 17 21 19 8 9 8 9 28 6 25 7 5 9 17 6 5 5 12 30 15 4 7 7 10 10 33 33 32 29 8 11 6 8 25 9 9 24 10 12 12 19 9 10 21 32 17 5 20 10 11 6 13 23 9 12 6 5 12 29 17 23 17 6 9 27 15 20 34 25 14 11 6 7 6 3 3 3 6 7 34 33 11 27 6 4 6 20 8 10 6 5 7 26 10 13 18 20 16 11 3 10 14 6 6 14 5 6 6 7 20 10 6 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr15_87911108_87911856
seq2: B6Ng01-198C14.b_45_794

seq1  GAATTCTTTCTTAAAAGTCTCCTGTTTTGCTTGCTGTTGTTGAGAAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTAAAAGTCTCCTGTTTTGCTTGCTGTTGTTGAGAAGTCT  50

seq1  CCACCAAACTCTGGTTCCAGTACCCAAGAACTTGGAAGTTCTTGTGGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAAACTCTGGTTCCAGTACCCAAGAACTTGGAAGTTCTTGTGGGTA  100

seq1  CCCTTTAAACCCCCCCAAATCTACTGATAGCAAAGAATTCTGGAGACTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTAAACCCCCCCAAATCTACTGATAGCAAAGAATTCTGGAGACTCG  150

seq1  ATGAAAAGCAAGAACCTTGATATGCAAAGCTGAGTGGTCACACAAGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGCAAGAACCTTGATATGCAAAGCTGAGTGGTCACACAAGAAAA  200

seq1  GGGCTGCAGCATTCCAGGATGGCCAAGAGCAGAACCCAAGACTAAGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCAGCATTCCAGGATGGCCAAGAGCAGAACCCAAGACTAAGAACA  250

seq1  GAAGAAGGATGGAGGAGTGGGAAGGCTGGAAGAGCTGGAGATGGAGCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGATGGAGGAGTGGGAAGGCTGGAAGAGCTGGAGATGGAGCCCA  300

seq1  GACTACAAAGATTGCAGTCCTAAGTCACAAGATGGTTCCAGAAAGCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACAAAGATTGCAGTCCTAAGTCACAAGATGGTTCCAGAAAGCTGTC  350

seq1  AGGGATTAAGGAGCCAAGGGTCCCAGCATCTAGAGCTCAGGGCCTGTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTAAGGAGCCAAGGGTCCCAGCATCTAGAGCTCAGGGCCTGTAGT  400

seq1  TTCAGCTGCTGGAAATTGGCTCTCTAAGCTCTAAGCAATAAGCTTCCGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTGCTGGAAATTGGCTCTCTAAGCTCTAAGCAATAAGCTTCCGCA  450

seq1  TTCGAAAGCTTGAAGCCCTAAGCCTTAAGTTCTTAAGGCTTTTGGAGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAAAGCTTGAAGCCCTAAGCCTTAAGTTCTTAAGGCTTTTGGAGCTA  500

seq1  GAAGATTCAGCTTGGAAGTCCTACTTGTGAGAGTTGGGAATTCATGGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTCAGCTTGGAAGTCCTACTTGTGAGAGTTGGGAATTCATGGCCA  550

seq1  CCAACACTGAGGTGGCAGTACTCTGGCTGTGTGAAGTATCTATGCAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACTGAGGTGGCAGTACTCTGGCTGTGTGAAGTATCTATGCAGAGA  600

seq1  GGACAAATGATCCAGTGTTTGTAAAGACACCGTCCAGAGAAGAGACAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAATGATCCAGTGTTTGTAAAGACACCGTCCAGAGAAGAGACAGGA  650

seq1  GGCAGGGAAAATAGCTGGATCCTTGGTGCTCCCCAGGGATGCCTTAAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGAAAATAGCTGGATCCTTGGTGCTCCCCAGGGATGCCTTAAGCT  700

seq1  CAGTGGTTGCTGCTAACTATGGAGTCAGGGGTGGGAGGT-GGGGTGAGAT  749
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAGTGGTTGCTGCTAACTATGGAGTCAGGGGTGGGAGGTGGGGGTGAGAT  750

seq1: chr15_88074761_88075846
seq2: B6Ng01-198C14.g_64_1165 (reverse)

seq1  TAAACTG-GATGAAATTTAGAGTC--ACTA-TGGAAACAAACTCTCAAAG  46
      ||||||| ||||||  ||||||||   ||| || ||||||  ||||||||
seq2  TAAACTGAGATGAA--TTAGAGTCCACCTATTGAAAACAATTTCTCAAAG  48

seq1  CATGCCTG--TGAGAGAATTT--CTAGAG-TAAGTAGGGGTAGGAAAACA  91
      ||||||||   ||||||||||   ||||| || ||||||||| | |||||
seq2  CATGCCTGGTGGAGAGAATTTTCTTAGAGTTAGGTAGGGGTAAGGAAACA  98

seq1  -CATCCCAAATATGGTC-AGCATCATCCCTAGTTGGGGT-CCTCATAAGA  138
       |||||||| ||||||| |||||||||| |||||||||| ||||||||||
seq2  CCATCCCAATTATGGTCAAGCATCATCCTTAGTTGGGGTCCCTCATAAGA  148

seq1  AGG--AAAAAGTGAGCTAAGCACCAATATTCTTCCCTCAGCGTCCTGGCT  186
      |||  |||||||||  ||||||| |  ||||| || ||||||||||||||
seq2  AGGAAAAAAAGTGAAGTAAGCACAATAATTCTCCCTTCAGCGTCCTGGCT  198

seq1  GCATACTGACCAGCTGCCTCACGCTCCTGCTAACCC-TTCCCCACCAAGA  235
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCATACTGACCAGCTGCCTCACGCTCCTGCTAACCCTTTCCCCACCAAGA  248

seq1  CAGACTGAAGCCTTCAGCTTCCAGCCAAAAT-AAACTA-TTCCTTACGTT  283
      ||||||||||||||||||||||||||||||| |||||| |||||||||||
seq2  CAGACTGAAGCCTTCAGCTTCCAGCCAAAATAAAACTATTTCCTTACGTT  298

seq1  ACTTACATCAGATACTCTGCCCTAGCAACAAGGCATGTTAAT-AACACAG  332
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACTTACATCAGATACTCTGCCCTAGCAACAAGGCATGTTAATAAACACAG  348

seq1  TAGGCGTACGAGAGACAGCCAGCATGGGACAAAGTGTTCCCATCATGGAT  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCGTACGAGAGACAGCCAGCATGGGACAAAGTGTTCCCATCATGGAT  398

seq1  GTCTGTGGTACCAGGTCCTGCGTTCAGTCTGTTCCCCTGCCTGTGCCTTG  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGGTACCAGGTCCTGCGTTCAGTCTGTTCCCCTGCCTGTGCCTTG  448

seq1  CTAAGCATGCCTCACTGAGCTATTGCAATCTAAATGTGTCTCGCGGACAC  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCATGCCTCACTGAGCTATTGCAATCTAAATGTGTCTCGCGGACAC  498

seq1  TAACAACTGCAGACATATGGACACAGACCGAAGCGCCCACGCACGCACGC  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAACTGCAGACATATGGACACAGACCGAAGCGCCCACGCACGCACGC  548

seq1  AGACATTGATGGTAGAACCCAGGCATAATGACACTGACAACAGCACCCAG  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTGATGGTAGAACCCAGGCATAATGACACTGACAACAGCACCCAG  598

seq1  ACACAGGGACCCTGGCAGCGGCGACCAGATACTAATGACAGAACTCAGGC  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGGACCCTGGCAGCGGCGACCAGATACTAATGACAGAACTCAGGC  648

seq1  ACCTAGACATAGACAGCAGCAACCAGACACTGACAGCAGTACCCAGACAC  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGACATAGACAGCAGCAACCAGACACTGACAGCAGTACCCAGACAC  698

seq1  ACAGACACTGGCAGAAGCACCCAGTCACACTGACACAAATGACAGCTCCC  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACACTGGCAGAAGCACCCAGTCACACTGACACAAATGACAGCTCCC  748

seq1  AGACACACTGACAGACAACAGCACCCAAACACACAGGCACTGATTACAGC  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACTGACAGACAACAGCACCCAAACACACAGGCACTGATTACAGC  798

seq1  ACCCAGACACTCCAGGGAAATTTGAGCAGTCGACATGAGCCGTCACCATC  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGACACTCCAGGGAAATTTGAGCAGTCGACATGAGCCGTCACCATC  848

seq1  CCGAGGGAGGGTCCATTCCCTGACCCCTCTCACGGCTGCTATAGCCTCCA  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGGAGGGTCCATTCCCTGACCCCTCTCACGGCTGCTATAGCCTCCA  898

seq1  ACCACTTCACAGCTGAATGGAGCAGAGCCTTGCCTACAAGATCACACTAT  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTTCACAGCTGAATGGAGCAGAGCCTTGCCTACAAGATCACACTAT  948

seq1  CCAAGCCCAGGGACGCTCATCCATCCTTTTTCTCAGAGCCTCGGGACAGG  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCCCAGGGACGCTCATCCATCCTTTTTCTCAGAGCCTCGGGACAGG  998

seq1  TTCTACAAAATCACAGGGGGCAAGATAATGTTGCAGAGAATACCCTCAAG  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAAAATCACAGGGGGCAAGATAATGTTGCAGAGAATACCCTCAAG  1048

seq1  GTACTGAAAAGGACCCTAGCCAAGGATGGCTGGTGCAGAGAGGCCCTAGA  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGAAAAGGACCCTAGCCAAGGATGGCTGGTGCAGAGAGGCCCTAGA  1098

seq1  ATTC  1086
      ||||
seq2  ATTC  1102

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Alignment Information