BAC Information

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BAC

Clone NameB6Ng01-203B07
Chromosome15 (Build37)
Map Location 24,307,647 - 24,423,378
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC624863, LOC666989
Downstream geneLOC666999, LOC100040492, LOC100040499, LOC100040529, 9230109A22Rik, 4930445E18Rik, Basp1, EG432939, LOC100040583
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203B07.bB6Ng01-203B07.g
ACCGA023397GA023398
length1,138771
definitionB6Ng01-203B07.b B6Ng01-203B07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,422,226 - 24,423,378)(24,307,647 - 24,308,417)
sequence
gaattctctcaagttcaacatttccctgatagttcatattttattgtcat
cattaataaataccgtaagttgttctatctctgtaaaatactcaattttg
aataattactgtttgcatttcagtcattctttcaagtgagcatattgttc
atgaccacagcagctgaatgggctctcagctgaaagtcacatacctatgc
tgtgttcaagagaagttgttcttaaaatcaactgaacgtatttttgggaa
acactcaatagcatcagacgttaaaatccctgaggggaaagtggtcccac
attgcatctgggtaaagataaataacagctgttactctcttttcacacaa
cagcatgattactgtcatctgtggtaggaattctgatttaggaaataaat
caggaacccaatttatgtgatcaatattagcatcaaggatatgggctctt
tacagagatgctatgttctggctcctaaaagaggaaaaaaaaaacatcaa
aacaaacctaaaaggtagccatttttgtgtaagattaaaagaagtggttg
tttttcacagcttttcagttatttcttattggtggaagtttgttacaatc
cttattaccaaaagacatgtaaaattagactccatgttagtagccatgtt
cctgtgggggagataaagaaggatggaggaagagatggataaagaagagg
gggtaactcttagtagaggaaaaaaataaaacttaaaacctaccacactt
ttaaatatttcagtcatttttaattgaaagattcaaaatagatacaatgg
ttttcttacatctttaataactatattctaaatgtatgtgttggatgcaa
aagttcacagcatcttataggcaccttaacatgccttgttaggctaaaag
aaaggccaagaatagacagtgctttgatgttttgttgtgagcatcacctt
ggataactacctctccagcccaacaatgttttttttttttttttttaata
aaaatgtatttagaaattgtttcagcctaaaagaatgtcaaattacgact
aaaggagataaaatgaagaatttagtgagggcaactgaagtgacacctag
tatacctttctgtgccaaacacttggtgtttaactccc

gaattccaggactgaatgatcttctttcaatggtcactgtaatggaagaa
taaatttgaagacaaattgccagtaacctgctcctggtttttggattctg
agtcattatgccttcactcttcctttcaatgtgcttcacctttggtgatc
agataaattatttataggaattattattttgagaaatgaggaaatagagt
ggagagtccctgtatttttggtggtacaaaagaagcactgtagaagtcct
ctgaaatctcagctttcttttttctctttctttgtttggattttccaatg
tttttataacttattttgttcatgtttcacctctgaactcctctcagatc
ctgatatctcccaacccaaccatgcttatgctagtctctcgatctcctct
ttctctctctcaaaacaaaactataaagacggaagtgaaaatcatagcaa
acaaaacaaataagatagaaaataccatgacaagatgaaacaaaaccaaa
ataaaaattgagtctgttgagttctgtggaatgtattttgggatatatat
atacacacacacacatgtatggctaatatccatgtattaagctgaggtgc
ccaagtgggcagggaggggcctgggagggaaagtggactggggtctggtg
gtagggggagaggggaacctgatctgatattgggtgagggaaagggactg
aagccctgtcggccagcagagagaatggaaatacgcaaccaacaagaagg
ttagagttggagggacccacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_24422226_24423378
seq2: B6Ng01-203B07.b_41_1178 (reverse)

seq1  GGGA-TTAAACA-CAAGTGTTTGTGCAACAGAAAGTTATTAACTAAGGTG  48
      |||| ||||||| |||||||||| || |||||||| |||  ||| |||||
seq2  GGGAGTTAAACACCAAGTGTTTG-GC-ACAGAAAGGTAT--ACT-AGGTG  45

seq1  TCACCTCAGTTGCCCCTCACTAATATCTTTCATTTTATCTCCTTTAGTCT  98
      |||| ||||||| |||||||||| ||  ||||||||||||||||||||| 
seq2  TCACTTCAGTTG-CCCTCACTAA-ATTCTTCATTTTATCTCCTTTAGTC-  92

seq1  GTATATTTTGAACCATTTCTTTTTGGGCTGAAACATTTTCTAAATACATT  148
         || |||||  ||||   |||| |||||||||| |||||||||||| |
seq2  --GTAATTTGA--CATT--CTTTTAGGCTGAAACAATTTCTAAATACA-T  135

seq1  TTTTATTAAAAAAAAAAAAAAAAAAACACTGTTGGGCTGGAGAGGTAGTT  198
      ||||||| |||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTATT-AAAAAAAAAAAAAAAAAACATTGTTGGGCTGGAGAGGTAGTT  184

seq1  ATCCAAGGTGATGCTCACAACCAAAACATCAAAGCACTGTCTATTCTTGG  248
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATCCAAGGTGATGCTCACAA-CAAAACATCAAAGCACTGTCTATTCTTGG  233

seq1  CCTTTCTTTTAGCCTAACAAGGCATGTTAAGGTGCCTATAAGATGCTGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTTTTAGCCTAACAAGGCATGTTAAGGTGCCTATAAGATGCTGTG  283

seq1  AACTTTTGCATCCAACACATACATTTAGAATATAGTTATTAAAGATGTAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTGCATCCAACACATACATTTAGAATATAGTTATTAAAGATGTAA  333

seq1  GAAAACCATTGTATCTATTTTGAATCTTTCAATTAAAAATGACTGAAATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCATTGTATCTATTTTGAATCTTTCAATTAAAAATGACTGAAATA  383

seq1  TTTAAAAGTGTGGTAGGTTTTAAGTTTTATTTTTTTCCTCTACTAAGAGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGTGTGGTAGGTTTTAAGTTTTATTTTTTTCCTCTACTAAGAGT  433

seq1  TACCCCCTCTTCTTTATCCATCTCTTCCTCCATCCTTCTTTATCTCCCCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCCTCTTCTTTATCCATCTCTTCCTCCATCCTTCTTTATCTCCCCC  483

seq1  ACAGGAACATGGCTACTAACATGGAGTCTAATTTTACATGTCTTTTGGTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAACATGGCTACTAACATGGAGTCTAATTTTACATGTCTTTTGGTA  533

seq1  ATAAGGATTGTAACAAACTTCCACCAATAAGAAATAACTGAAAAGCTGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGATTGTAACAAACTTCCACCAATAAGAAATAACTGAAAAGCTGTG  583

seq1  AAAAACAACCACTTCTTTTAATCTTACACAAAAATGGCTACCTTTTAGGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAACCACTTCTTTTAATCTTACACAAAAATGGCTACCTTTTAGGT  633

seq1  TTGTTTTGATGTTTTTTTTTTCCTCTTTTAGGAGCCAGAACATAGCATCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGATGTTTTTTTTTTCCTCTTTTAGGAGCCAGAACATAGCATCT  683

seq1  CTGTAAAGAGCCCATATCCTTGATGCTAATATTGATCACATAAATTGGGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAAGAGCCCATATCCTTGATGCTAATATTGATCACATAAATTGGGT  733

seq1  TCCTGATTTATTTCCTAAATCAGAATTCCTACCACAGATGACAGTAATCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATTTATTTCCTAAATCAGAATTCCTACCACAGATGACAGTAATCA  783

seq1  TGCTGTTGTGTGAAAAGAGAGTAACAGCTGTTATTTATCTTTACCCAGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTGTGTGAAAAGAGAGTAACAGCTGTTATTTATCTTTACCCAGAT  833

seq1  GCAATGTGGGACCACTTTCCCCTCAGGGATTTTAACGTCTGATGCTATTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTGGGACCACTTTCCCCTCAGGGATTTTAACGTCTGATGCTATTG  883

seq1  AGTGTTTCCCAAAAATACGTTCAGTTGATTTTAAGAACAACTTCTCTTGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTCCCAAAAATACGTTCAGTTGATTTTAAGAACAACTTCTCTTGA  933

seq1  ACACAGCATAGGTATGTGACTTTCAGCTGAGAGCCCATTCAGCTGCTGTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCATAGGTATGTGACTTTCAGCTGAGAGCCCATTCAGCTGCTGTG  983

seq1  GTCATGAACAATATGCTCACTTGAAAGAATGACTGAAATGCAAACAGTAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGAACAATATGCTCACTTGAAAGAATGACTGAAATGCAAACAGTAA  1033

seq1  TTATTCAAAATTGAGTATTTTACAGAGATAGAACAACTTACGGTATTTAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAAAATTGAGTATTTTACAGAGATAGAACAACTTACGGTATTTAT  1083

seq1  TAATGATGACAATAAAATATGAACTATCAGGGAAATGTTGAACTTGAGAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATGACAATAAAATATGAACTATCAGGGAAATGTTGAACTTGAGAG  1133

seq1  AATTC  1153
      |||||
seq2  AATTC  1138


seq1: chr15_24307647_24308417
seq2: B6Ng01-203B07.g_67_837

seq1  GAATTCCAGGACTGAATGATCTTCTTTCAATGGTCACTGTAATGGAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACTGAATGATCTTCTTTCAATGGTCACTGTAATGGAAGAA  50

seq1  TAAATTTGAAGACAAATTGCCAGTAACCTGCTCCTGGTTTTTGGATTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTGAAGACAAATTGCCAGTAACCTGCTCCTGGTTTTTGGATTCTG  100

seq1  AGTCATTATGCCTTCACTCTTCCTTTCAATGTGCTTCACCTTTGGTGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTATGCCTTCACTCTTCCTTTCAATGTGCTTCACCTTTGGTGATC  150

seq1  AGATAAATTATTTATAGGAATTATTATTTTGAGAAATGAGGAAATAGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAATTATTTATAGGAATTATTATTTTGAGAAATGAGGAAATAGAGT  200

seq1  GGAGAGTCCCTGTATTTTTGGTGGTACAAAAGAAGCACTGTAGAAGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTCCCTGTATTTTTGGTGGTACAAAAGAAGCACTGTAGAAGTCCT  250

seq1  CTGAAATCTCAGCTTTCTTTTTTCTCTTTCTTTGTTTGGATTTTCCAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATCTCAGCTTTCTTTTTTCTCTTTCTTTGTTTGGATTTTCCAATG  300

seq1  TTTTTATAACTTATTTTGTTCATGTTTCACCTCTGAACTCCTCTCAGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATAACTTATTTTGTTCATGTTTCACCTCTGAACTCCTCTCAGATC  350

seq1  CTGATATCTCCCAACCCAACCATGCTTATGCTAGTCTCTCGATCTCCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATCTCCCAACCCAACCATGCTTATGCTAGTCTCTCGATCTCCTCT  400

seq1  TTCTCTCTCTCAAAACAAAACTATAAAGACGGAAGTGAAAATCATAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTCTCAAAACAAAACTATAAAGACGGAAGTGAAAATCATAGCAA  450

seq1  ACAAAACAAATAAGATAGAAAATACCATGACAAGATGAAACAAAACCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAATAAGATAGAAAATACCATGACAAGATGAAACAAAACCAAA  500

seq1  ATAAAAATTGAGTCTGTTGAGTTCTGTGGAATGTATTTTGGGATATATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATTGAGTCTGTTGAGTTCTGTGGAATGTATTTTGGGATATATAT  550

seq1  ATACACACACACACATGTATGGCTAATATCCATGTATTAAGCTGAGGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACACACATGTATGGCTAATATCCATGTATTAAGCTGAGGTGC  600

seq1  CCAAGTGGGCAGGGAGGGGCCTGGGAGGGAAAGTGGACTGGGGTCTGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGGGCAGGGAGGGGCCTGGGAGGGAAAGTGGACTGGGGTCTGGTG  650

seq1  GTAGGGGGAGAGGGGAACCTGATCTGATATTGGGTGAGGGAAAGGGACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGGGAGAGGGGAACCTGATCTGATATTGGGTGAGGGAAAGGGACTG  700

seq1  AAGCCCTGTCGGCCAGCAGAGAGAATGGAAATAGGCAACCAACAAGAAGG  750
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAGCCCTGTCGGCCAGCAGAGAGAATGGAAATACGCAACCAACAAGAAGG  750

seq1  TTAGAGTTGGAGGGACCCACC  771
      |||||||||||||||||||||
seq2  TTAGAGTTGGAGGGACCCACC  771


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