BAC Information

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BAC

Clone NameB6Ng01-204B04
Chromosome15 (Build37)
Map Location 60,264,761 - 60,445,159
singlet/doubletdoublet
Overlap geneLOC623094
Upstream geneNsmce2, Trib1, LOC665602, EG632248, LOC665613, 4933412E24Rik, LOC100040266, LOC623048, LOC211832
Downstream geneEG632412, LOC100040311, D330050I23Rik, 9930014A18Rik, A1bg, LOC100040323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204B04.bB6Ng01-204B04.g
ACCGA024118GA024119
length1,1801,044
definitionB6Ng01-204B04.b B6Ng01-204B04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,443,994 - 60,445,159)(60,264,761 - 60,265,782)
sequence
gaattcattctatcatggtggagagaggatgacagagcaactgacatcat
ggagaagaaacaggaagaaagatgcaagaagaaagaagaagactggatca
ggagtagtcttcgtaggcataccccagaagacatacttgctcatctcaac
tccactacttacatagtctacaactttcccaaataattcaagtcctttac
acatgactctgtaagagatataaaataaaaaatttccaccatggagacct
gatttccaatccctataatactaatcccagtgatcctatattgagatagg
agacaaagacaggagaatctagaagcaagatgattagctagcctgaatac
acagcaatgagcaagagagctgtctcaaaaaagatagaaaatgggaactg
acatccaagactgtcctctgactttcatgcatttgtggcatacagtactt
ggacacaagaatatgaacatgactagatattttttttaattcattcatgt
ctgatgcttggtcctagcacactgctctctgcttgactgacacaaacttc
tccttctctcagagaaagttaaaaatctcaaaattttaaataatctagtg
tctagagtttccttatctttttggcacccatgtgtatattccaatataac
atagattcatttttgccttttaaagcaccaacctatatttaaccatatta
tttacattgttagcaagaatctgcctggctcattccttgctgtgtgactt
aaggttgtggttccctgtttctgttctactctgttctcttactttgtagg
gtaaccttcagatttattccttttctgaatacttgatctgattccagtga
cttctgtcttacatctgccgaggcatgcctctcatcctgcctgatacttc
gtgaacttttactacaaccagattttcacatgtacaaattttgagagaga
ggttaatgtctccctgaaccttcccttggttgcaccctatgtctccaacc
tagccattcccccgggagtttaggactgggtcttcagagatcttagtttt
cattcaacaggattttttcttcaagtctaaaagcttcttttgttagacta
tatctaaccattcccattcatattcatgcttaggaatgaaagatttcctt
ttattctgaacctttacaaacatttacttg

gaattctcatcattctgcaggtgtatgcatggatttttttcttggtgaat
gcttagaaaacaactactttataaaaaaaggatagcgttcttgtatctat
tttttttcaggacagggtttctccatatagccctggctgtcctggaactc
actttgtagaccaggctggtctcaaactcagaaatccgcctgcctctgtc
tcccgagtgttgggattaaaggtttatgccaccacgcccagcactttctt
gtatctaaagagacaggatatggggtggatttgatcaaaacaatcatatg
catgcataaaagtctcttacaacaacagcaaacagacagcagctaaaaat
taaaactcatagtatttcaattttatcatgtaaaatttagaaattttaca
gaaactaaactaccagaaaactagtattttttctgtagctactgtcacta
ttttcaaacaatcaattagaaaaaaacgttttatgtattttctttaccaa
ttcaaattgtatcatttattttagagtagacatttaatgcatatatttaa
aaatgttcaaatgaaaaaagaaatcctgtctcctttttcttctgtcccaa
agtaccttcaagagatttgatcagaatcctttgtaccctgtgttttcagt
ttggtccttcagaatatattataaagtgtttattttctttaagagagaga
aaaggaatagttttatcttcagtatacaatagaaagaaagctatgcttag
aaatgtatgtttttgatttacatcactttacattattttttttccctttt
cttttttcttttttattattattatttttattaggtattttctttcattt
tacatttcgaatgctataccaaaagtctccttataccctccccccccaaa
ctcccctacccacccactcccactttcttgggccctggcatttcccctat
aactgaggcatataagtttgcaaggaactaatgggccctctctttcccac
tgatggcctgactaaggccatcctttctgaatagaatatgcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_60443994_60445159
seq2: B6Ng01-204B04.b_46_1225 (reverse)

seq1  CAAGTTAATGTTTTGTAAA-GCTCAG---ATAAGGAAATCTTTTCATT-C  45
      ||||| |||| |||||||| | ||||   | ||||||||| ||||||| |
seq2  CAAGTAAATG-TTTGTAAAGGTTCAGAATAAAAGGAAATC-TTTCATTCC  48

seq1  TAGGTATG-ATATG-ATGGGGAT-GTTAGATTATAGTCTTACAAA--GAG  90
      || | ||| ||||| ||||| || |||||| |||||||| |||||   ||
seq2  TAAGCATGAATATGAATGGGAATGGTTAGA-TATAGTCTAACAAAAGAAG  97

seq1  CTTTTAGACTTGGAG-AAAAATCCTGTTG-ATGAAAACCTAAGATCTCTG  138
      |||||||||||| || ||||||||||||| ||||||| ||||||||||||
seq2  CTTTTAGACTTGAAGAAAAAATCCTGTTGAATGAAAA-CTAAGATCTCTG  146

seq1  -AGA-CCAGTCCTAAACTCCCGGGGG-ATGGCTA-GTTGGAGACATA-GG  183
       ||| ||||||||||||||||||||| ||||||| |||||||||||| ||
seq2  AAGACCCAGTCCTAAACTCCCGGGGGAATGGCTAGGTTGGAGACATAGGG  196

seq1  TGCAACCAAGGGAAGGTTCAGGGAGACATTAAACTTCTCTCTC-AAATTT  232
      |||||||||||||||||||||||||||||| ||| |||||||| ||||||
seq2  TGCAACCAAGGGAAGGTTCAGGGAGACATT-AACCTCTCTCTCAAAATTT  245

seq1  GTACATGTGAAAATCTGGTTGTAGTAAAAGTTCACGAAGTATCAGGCAGG  282
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGTGAAAATCTGGTTGTAGTAAAAGTTCACGAAGTATCAGGCAGG  295

seq1  ATGAGAGGCATGCCTCGGCAGATGTAAGACAGAAGTCACTGGAATCAGAT  332
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGGCATGCCTCGGCAGATGTAAGACAGAAGTCACTGGAATCAGAT  345

seq1  CAAGTATTCAG-AAAGGAATAAATCTGAAGGTTACCCTACAAAGTAAGAG  381
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATTCAGAAAAGGAATAAATCTGAAGGTTACCCTACAAAGTAAGAG  395

seq1  AACAGAGTAGAACAGAAACAGGGAACCACAACCTTAAGTCACACAGCAAG  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGTAGAACAGAAACAGGGAACCACAACCTTAAGTCACACAGCAAG  445

seq1  GAATGAGCCAGGCAGATTCTTGCTAACAATGTAAATAATATGGTTAAATA  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGCCAGGCAGATTCTTGCTAACAATGTAAATAATATGGTTAAATA  495

seq1  TAGGTTGGTGCTTTAAAAGGCAAAAATGAATCTATGTTATATTGGAATAT  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTGGTGCTTTAAAAGGCAAAAATGAATCTATGTTATATTGGAATAT  545

seq1  ACACATGGGTGCCAAAAAGATAAGGAAACTCTAGACACTAGATTATTTAA  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGGGTGCCAAAAAGATAAGGAAACTCTAGACACTAGATTATTTAA  595

seq1  AATTTTGAGATTTTTAACTTTCTCTGAGAGAAGGAGAAGTTTGTGTCAGT  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGAGATTTTTAACTTTCTCTGAGAGAAGGAGAAGTTTGTGTCAGT  645

seq1  CAAGCAGAGAGCAGTGTGCTAGGACCAAGCATCAGACATGAATGAATTAA  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGAGAGCAGTGTGCTAGGACCAAGCATCAGACATGAATGAATTAA  695

seq1  AAAAAATATCTAGTCATGTTCATATTCTTGTGTCCAAGTACTGTATGCCA  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATATCTAGTCATGTTCATATTCTTGTGTCCAAGTACTGTATGCCA  745

seq1  CAAATGCATGAAAGTCAGAGGACAGTCTTGGATGTCAGTTCCCATTTTCT  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCATGAAAGTCAGAGGACAGTCTTGGATGTCAGTTCCCATTTTCT  795

seq1  ATCTTTTTTGAGACAGCTCTCTTGCTCATTGCTGTGTATTCAGGCTAGCT  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTTGAGACAGCTCTCTTGCTCATTGCTGTGTATTCAGGCTAGCT  845

seq1  AATCATCTTGCTTCTAGATTCTCCTGTCTTTGTCTCCTATCTCAATATAG  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCTTGCTTCTAGATTCTCCTGTCTTTGTCTCCTATCTCAATATAG  895

seq1  GATCACTGGGATTAGTATTATAGGGATTGGAAATCAGGTCTCCATGGTGG  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTGGGATTAGTATTATAGGGATTGGAAATCAGGTCTCCATGGTGG  945

seq1  AAATTTTTTATTTTATATCTCTTACAGAGTCATGTGTAAAGGACTTGAAT  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTTATTTTATATCTCTTACAGAGTCATGTGTAAAGGACTTGAAT  995

seq1  TATTTGGGAAAGTTGTAGACTATGTAAGTAGTGGAGTTGAGATGAGCAAG  1031
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGGAAAGTTGTAGACTATGTAAGTAGTGGAGTTGAGATGAGCAAG  1045

seq1  TATGTCTTCTGGGGTATGCCTACGAAGACTACTCCTGATCCAGTCTTCTT  1081
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTCTGGGGTATGCCTACGAAGACTACTCCTGATCCAGTCTTCTT  1095

seq1  CTTTCTTCTTGCATCTTTCTTCCTGTTTCTTCTCCATGATGTCAGTTGCT  1131
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCTTGCATCTTTCTTCCTGTTTCTTCTCCATGATGTCAGTTGCT  1145

seq1  CTGTCATCCTCTCTCCACCATGATAGAATGAATTC  1166
      |||||||||||||||||||||||||||||||||||
seq2  CTGTCATCCTCTCTCCACCATGATAGAATGAATTC  1180


seq1: chr15_60264761_60265782
seq2: B6Ng01-204B04.g_68_1111

seq1  GAATTCTCATCATTCTGCAGGTGTATGCATGGATTTTTTTCTTGGTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCATTCTGCAGGTGTATGCATGGATTTTTTTCTTGGTGAAT  50

seq1  GCTTAGAAAACAACTACTTTATAAAAAAAGGATAGCGTTCTTGTATCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGAAAACAACTACTTTATAAAAAAAGGATAGCGTTCTTGTATCTAT  100

seq1  TTTTTTTCAGGACAGGGTTTCTCCATATAGCCCTGGCTGTCCTGGAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCAGGACAGGGTTTCTCCATATAGCCCTGGCTGTCCTGGAACTC  150

seq1  ACTTTGTAGACCAGGCTGGTCTCAAACTCAGAAATCCGCCTGCCTCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTAGACCAGGCTGGTCTCAAACTCAGAAATCCGCCTGCCTCTGTC  200

seq1  TCCCGAGTGTTGGGATTAAAGGTTTATGCCACCACGCCCAGCACTTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAGTGTTGGGATTAAAGGTTTATGCCACCACGCCCAGCACTTTCTT  250

seq1  GTATCTAAAGAGACAGGATATGGGGTGGATTTGATCAAAACAATCATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTAAAGAGACAGGATATGGGGTGGATTTGATCAAAACAATCATATG  300

seq1  CATGCATAAAAGTCTCTTACAACAACAGCAAACAGACAGCAGCTAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATAAAAGTCTCTTACAACAACAGCAAACAGACAGCAGCTAAAAAT  350

seq1  TAAAACTCATAGTATTTCAATTTTATCATGTAAAATTTAGAAATTTTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTCATAGTATTTCAATTTTATCATGTAAAATTTAGAAATTTTACA  400

seq1  GAAACTAAACTACCAGAAAACTAGTATTTTTTCTGTAGCTACTGTCACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAAACTACCAGAAAACTAGTATTTTTTCTGTAGCTACTGTCACTA  450

seq1  TTTTCAAACAATCAATTAGAAAAAAACGTTTTATGTATTTTCTTTACCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAACAATCAATTAGAAAAAAACGTTTTATGTATTTTCTTTACCAA  500

seq1  TTCAAATTGTATCATTTATTTTAGAGTAGACATTTAATGCATATATTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATTGTATCATTTATTTTAGAGTAGACATTTAATGCATATATTTAA  550

seq1  AAATGTTCAAATGAAAAAAGAAATCCTGTCTCCTTTTTCTTCTGTCCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTCAAATGAAAAAAGAAATCCTGTCTCCTTTTTCTTCTGTCCCAA  600

seq1  AGTACCTTCAAGAGATTTGATCAGAATCCTTTGTACCCTGTGTTTTCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTTCAAGAGATTTGATCAGAATCCTTTGTACCCTGTGTTTTCAGT  650

seq1  TTGGTCCTTCAGAATATATTATAAAGTGTTTATTTTCTTTAAGAGAGAG-  699
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTGGTCCTTCAGAATATATTATAAAGTGTTTATTTTCTTTAAGAGAGAGA  700

seq1  AAAGGAATAGTTTTATCTTCAGTATACAATAG-AAGAAAGCTATGCTTAG  748
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAAGGAATAGTTTTATCTTCAGTATACAATAGAAAGAAAGCTATGCTTAG  750

seq1  AAATGTATGTTTTTGATTTACATCACTTTACATTATTTTTTT--CCTTTT  796
      ||||||||||||||||||||||||||||||||||||||||||  ||||||
seq2  AAATGTATGTTTTTGATTTACATCACTTTACATTATTTTTTTTCCCTTTT  800

seq1  CTTTTTTCTTTTTTATTATTATTATTTTTATTAGGTATTTTC-TTCA-TT  844
      |||||||||||||||||||||||||||||||||||||||||| |||| ||
seq2  CTTTTTTCTTTTTTATTATTATTATTTTTATTAGGTATTTTCTTTCATTT  850

seq1  TACATTTCGAATGCTATACCAAAAGTCTCC-TATACCCTCCCCCCC--AA  891
      |||||||||||||||||||||||||||||| |||||||||||||||  ||
seq2  TACATTTCGAATGCTATACCAAAAGTCTCCTTATACCCTCCCCCCCCAAA  900

seq1  CTCCCCTACCCACCCACTCCCAC-TTCTT-GGCCCTGGCA-TTCCCCTAT  938
      ||||||||||||||||||||||| ||||| |||||||||| |||||||||
seq2  CTCCCCTACCCACCCACTCCCACTTTCTTGGGCCCTGGCATTTCCCCTAT  950

seq1  -ACTGAGGCATATAAAGTTTGCAAG--ACCAATGGG-CCTCTCTTT-CCA  983
       |||||||||||| |||||||||||  || |||||| ||||||||| |||
seq2  AACTGAGGCATAT-AAGTTTGCAAGGAACTAATGGGCCCTCTCTTTCCCA  999

seq1  CTGATGG-CTGACT-AGGCCATC--TTCTG-ATAG-ATATGCAGT  1022
      ||||||| |||||| ||||||||  ||||| |||| |||||||||
seq2  CTGATGGCCTGACTAAGGCCATCCTTTCTGAATAGAATATGCAGT  1044


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