BAC Information

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BAC

Clone NameB6Ng01-204K16
Chromosome7 (Build37)15 (Build37)
Map Location 130,169,473 - 130,169,52998,598,686 - 98,599,220
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEars2, Ubfd1, Ndufab1, Palb2, Dctn5, Plk1, Ern2, 2010110P09Rik, Prkcb1, LOC668486, Cacng3, 4930413G21Rik, Rbbp6, LOC628696, LOC100042977, LOC100042981
Downstream geneTnrc6a, Slc5a11, Arhgap17, Lcmt1, Aqp8, Zkscan2, LOC100043482, EG628779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204K16.bB6Ng01-204K16.g
ACCGA024548GA024549
length150529
definitionB6Ng01-204K16.b B6Ng01-204K16.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(130,169,473 - 130,169,529)(98,598,686 - 98,599,220)
sequence
gaattccaggacctttttagagggtatataaatgctaaggcccctgagag
gtgggggtttgttgattggttgttgttggtctcagttaagtagttgtaat
gcatgaagaagaaacaaggaggaggaggaagaggaggaggaggaggagga

acccatcctctccatggcaacaacttagcgggagatgtcagacacctgct
aacctaatgtgtgaatgaggagaggaagaaaggagaggggactgaagtaa
gatggacttggatacaaccaagaataacagggaacatccagagtgcagat
gccttccctctaggaagaggcattctccagatggggctgtggcgagagag
tcttttaactttccttttccctcccctgtcggtccctttgcctccctcgc
tttcctagcttttctttccatagcatgcacgctctgtggtggacttaagc
cccaaaccacaaccttgacaaattccaattggatttggtcagcagggcca
acaccccctcccagcacaggcgctgggctcaggcccaggactggggtcag
tggtggggtgggagtttgcaacccacagaactggtgggtggctacagttt
cagcttttactgggctctggtggcagctggagggagggaaaagagcacac
tctggaggagccctaccttgaccaaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_130169473_130169529
seq2: B6Ng01-204K16.b_147_190 (reverse)

seq1  TCCTCTCCTCCTCCTCCTCTTCCTTCTCCTCCTCCTCCTTCTCCTTCTTT  50
           |||||||||||||| ||||  |||||||||||||        | |
seq2  -----TCCTCCTCCTCCTCCTCCTCTTCCTCCTCCTCCT--------TGT  37

seq1  TTCTTCT  57
      |||||||
seq2  TTCTTCT  44

seq1: chr15_98598686_98599220
seq2: B6Ng01-204K16.g_72_606 (reverse)

seq1  CCATTTGGTCAAGGTAGGGCTCCTCCAGAGTGTGCTCTTTTCCCTCCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGGTCAAGGTAGGGCTCCTCCAGAGTGTGCTCTTTTCCCTCCCTC  50

seq1  CAGCTGCCACCAGAGCCCAGTAAAAGCTGAAACTGTAGCCACCCACCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCCACCAGAGCCCAGTAAAAGCTGAAACTGTAGCCACCCACCAGT  100

seq1  TCTGTGGGTTGCAAACTCCCACCCCACCACTGACCCCAGTCCTGGGCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGGTTGCAAACTCCCACCCCACCACTGACCCCAGTCCTGGGCCTG  150

seq1  AGCCCAGCGCCTGTGCTGGGAGGGGGTGTTGGCCCTGCTGACCAAATCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGCGCCTGTGCTGGGAGGGGGTGTTGGCCCTGCTGACCAAATCCA  200

seq1  ATTGGAATTTGTCAAGGTTGTGGTTTGGGGCTTAAGTCCACCACAGAGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAATTTGTCAAGGTTGTGGTTTGGGGCTTAAGTCCACCACAGAGCG  250

seq1  TGCATGCTATGGAAAGAAAAGCTAGGAAAGCGAGGGAGGCAAAGGGACCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCTATGGAAAGAAAAGCTAGGAAAGCGAGGGAGGCAAAGGGACCG  300

seq1  ACAGGGGAGGGAAAAGGAAAGTTAAAAGACTCTCTCGCCACAGCCCCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGAGGGAAAAGGAAAGTTAAAAGACTCTCTCGCCACAGCCCCATC  350

seq1  TGGAGAATGCCTCTTCCTAGAGGGAAGGCATCTGCACTCTGGATGTTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAATGCCTCTTCCTAGAGGGAAGGCATCTGCACTCTGGATGTTCCC  400

seq1  TGTTATTCTTGGTTGTATCCAAGTCCATCTTACTTCAGTCCCCTCTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTCTTGGTTGTATCCAAGTCCATCTTACTTCAGTCCCCTCTCCTT  450

seq1  TCTTCCTCTCCTCATTCACACATTAGGTTAGCAGGTGTCTGACATCTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCTCCTCATTCACACATTAGGTTAGCAGGTGTCTGACATCTCCC  500

seq1  GCTAAGTTGTTGCCATGGAGAGGATGGGTGAATTC  535
      |||||||||||||||||||||||||||||||||||
seq2  GCTAAGTTGTTGCCATGGAGAGGATGGGTGAATTC  535