BAC Information

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BAC

Clone NameB6Ng01-205J10
Chromosome15 (Build37)
Map Location 66,516,970 - 66,517,963
singlet/doubletsinglet
Overlap geneTg
Upstream geneC920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3, Lrrc6, LOC100040860, Tmem71, LOC100040881, Phf20l1
Downstream geneSla, Wisp1, Ndrg1, LOC100040667, St3gal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205J10.bB6Ng01-205J10.g
ACCGA025230GA025231
length997499
definitionB6Ng01-205J10.b B6Ng01-205J10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctgatgccacataaaagttgtcaggcaaggagggtgcagcc
cagaaccccagagacaactgagaaggatgggggctcagacaaggctcaga
gagagatgaatctcagattctgttgcggtggggtcagtgaaaactcatca
ggtcagagcctcttgcaagagcaggctgtagacagaggaaggataccact
cagttgagctaggtctccgcactgacttcatatttggtggacagggcaca
ggacactagctgtatgagctagactactagatttcctgacccagtttcca
cagcaagtagaggagtaaacctgggcaagtgactaaggcagggttcaact
tctctgcgtaagggatcatgggtagtattatatctttgttcttctgaaat
gttaacagaattaacacaatgacccaattatgtatttggcatgcaagtta
cctggtcatgggctaggttaaaacactgtgtggttgttgctaaaccagag
gactgtgatacaaacctttgggacctgctctcataattccctgaggtcaa
aggagcaatgggttctcagtaaagagggtcatgttctttctccttccctg
tacacttgggagtgaaaggtaactttaaaacaggtcaagggttaagagca
catgggaccttttaacaagactaaggttttacgtggactgcacgtgccat
ctggggtacacaatgtaaagccccgcatgggctttgctgaaggatcatga
atcctttatgtaacgctttggctagagtcacagaaccattctgccattcc
aggaacctgactgctcatggaaaccaaatgaagtcctggaaaggcagatg
caagctattgcttccccccaaaaagatgctgagagaatcttcagtgcaac
actcactggactgagcagccaagcgaatggcatattcacccccacgtaga
aacttctcagagaaagcatcccgggaatggggaattggggaaggaag
gaattctttgttcagctctgagccccattttttaatgtggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttgggataggtaaagatcatttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgtgacgaaaggatggaccatctagt
gattgccatatgcagggatccatcccataatcagcttccaaatgatgaca
ccattgcatacactagcaagattttgctgaaaggactcagatatagctgt
ctcttgtgagactatgctggggcctagcaaacacagaagtggatgatcac
agtcagctattggatggatcacacggcccccaatggaggagctagagaaa
ttacccaaggagctaaagggatctgcaaccctataggtggaacaacatta
tgaactaaccagtaccccggagctcttgtctctagctgcatatgcatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_66516970_66517963
seq2: B6Ng01-205J10.b_47_1043 (reverse)

seq1  CTTCC-TCCCCAATTCCC--ATCCCGGGATGCTTTCTCTGAGAAGTTTCT  47
      ||||| ||||||||||||   |||||||||||||||||||||||||||||
seq2  CTTCCTTCCCCAATTCCCCATTCCCGGGATGCTTTCTCTGAGAAGTTTCT  50

seq1  ACGTGGGGGTGAATATGCCATTCGCTTGGCTGCTCAGTCCAGTGAGTGTT  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGGGGGTGAATATGCCATTCGCTTGGCTGCTCAGTCCAGTGAGTGTT  100

seq1  GCACTGAAGATTCTCTCAGCATCTTTTTGGGGGGAAGCAATAGCTTGCAT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGAAGATTCTCTCAGCATCTTTTTGGGGGGAAGCAATAGCTTGCAT  150

seq1  CTGCCTTTCCAGGACTTCATTTGGTTTCCATGAGCAGTCAGGTTCCTGGA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTCCAGGACTTCATTTGGTTTCCATGAGCAGTCAGGTTCCTGGA  200

seq1  ATGGCAGAATGGTTCTGTGACTCTAGCCAAAGCGTTACATAAAGGATTCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGAATGGTTCTGTGACTCTAGCCAAAGCGTTACATAAAGGATTCA  250

seq1  TGATCCTTCAGCAAAGCCCATGCGGGGCTTTACATTGTGTACCCCAGATG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTTCAGCAAAGCCCATGCGGGGCTTTACATTGTGTACCCCAGATG  300

seq1  GCACGTGCAGTCCACGTAAAACCTTAGTCTTGTTAAAAGGTCCCATGTGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTGCAGTCCACGTAAAACCTTAGTCTTGTTAAAAGGTCCCATGTGC  350

seq1  TCTTAACCCTTGACCTGTTTTAAAGTTACCTTTCACTCCCAAGTGTACAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACCCTTGACCTGTTTTAAAGTTACCTTTCACTCCCAAGTGTACAG  400

seq1  GGAAGGAGAAAGAACATGACCCTCTTTACTGAGAACCCATTGCTCCTTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGAAAGAACATGACCCTCTTTACTGAGAACCCATTGCTCCTTTG  450

seq1  ACCTCAGGGAATTATGAGAGCAGGTCCCAAAGGTTTGTATCACAGTCCTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGGGAATTATGAGAGCAGGTCCCAAAGGTTTGTATCACAGTCCTC  500

seq1  TGGTTTAGCAACAACCACACAGTGTTTTAACCTAGCCCATGACCAGGTAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTAGCAACAACCACACAGTGTTTTAACCTAGCCCATGACCAGGTAA  550

seq1  CTTGCATGCCAAATACATAATTGGGTCATTGTGTTAATTCTGTTAACATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATGCCAAATACATAATTGGGTCATTGTGTTAATTCTGTTAACATT  600

seq1  TCAGAAGAACAAAGATATAATACTACCCATGATCCCTTACGCAGAGAAGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGAACAAAGATATAATACTACCCATGATCCCTTACGCAGAGAAGT  650

seq1  TGAACCCTGCCTTAGTCACTTGCCCAGGTTTACTCCTCTACTTGCTGTGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCTGCCTTAGTCACTTGCCCAGGTTTACTCCTCTACTTGCTGTGG  700

seq1  AAACTGGGTCAGGAAATCTAGTAGTCTAGCTCATACAGCTAGTGTCCTGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGGTCAGGAAATCTAGTAGTCTAGCTCATACAGCTAGTGTCCTGT  750

seq1  GCCCTGTCCACCAAATATGAAGTCAGTGCGGAGACCTAGCTCAACTGAGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGTCCACCAAATATGAAGTCAGTGCGGAGACCTAGCTCAACTGAGT  800

seq1  GGTATCCTTCCTCTGTCTACAGCCTGCTCTTGCAAGAGGCTCTGACCTGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCCTTCCTCTGTCTACAGCCTGCTCTTGCAAGAGGCTCTGACCTGA  850

seq1  TGAGTTTTCACTGACCCCACCGCAACAGAATCTGAGATTCATCTCTCTCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTCACTGACCCCACCGCAACAGAATCTGAGATTCATCTCTCTCT  900

seq1  GAGCCTTGTCTGAGCCCCCATCCTTCTCAGTTGTCTCTGGGGTTCTGGGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTTGTCTGAGCCCCCATCCTTCTCAGTTGTCTCTGGGGTTCTGGGC  950

seq1  TGCACCCTCCTTGCCTGACAACTTTTATGTGGCATCAGAGTGAATTC  994
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCCTCCTTGCCTGACAACTTTTATGTGGCATCAGAGTGAATTC  997