BAC Information

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BAC

Clone NameB6Ng01-206N08
Chromosome15 (Build37)
Map Location 80,991,039 - 81,096,000
singlet/doubletdoublet
Overlap geneMkl1, LOC675966, Mchr1
Upstream geneMap3k7ip1, Mgat3, EG666948, Smcr7l, Atf4, Rps19bp1, Cacna1i, Enthd1, Grap2, AW544981, Tnrc6b, Adsl, LOC625672, Rutbc3
Downstream geneSlc25a17, St13, Xpnpep3, Dnajb7, Rbx1, EG383080, Ep300, L3mbtl2, Rangap1, Zc3h7b, Tef, LOC667073, Tob2, Phf5a, Aco2, Polr3h, Csdc2, Pmm1, EG545121, 1700029P11Rik, D15Wsu75e, Xrcc6, Nhp2l1, 4930407I10Rik, Mei1, Ccdc134, Srebf2, LOC435145, Tnfrsf13c, Cenpm, 1500009C09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206N08.bB6Ng01-206N08.g
ACCGA026146GA026147
length6421,108
definitionB6Ng01-206N08.b B6Ng01-206N08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,095,360 - 81,096,000)(80,991,039 - 80,992,150)
sequence
gaattcctcccaaatttcaatacaaaggcaagatggtgcttcccccgtga
cactacagtttttttttcgtttatgtattctacatttcctgtgttcgaat
gttcgtgttttgctttggattgctggggtttccaaagccaagtttatgga
tcacattaacaactgtgcagggcagcttactgcatggttatgagcttcgt
tatttccctcctctgaattcctcttcccgtttctaatgatacctatttca
ttccttgatattatatatatatatatatatatatatatatatttgtaagc
cacctcaaacatttgtataacggagcaggtagaaatatatatgtgcatga
aaatgtcccctacccccatcccagtgcatgagtaaaccatgaatacgtag
caatgtccatggagatgaattggacctttcttctgcccaggtgaagtgga
acacccagtgcccgcttccctccatcttttgtaggatcctttggtacccg
gtgcagcctgcccagggggtgggggtggggtgctagtttctgataacttc
cgctccaccctaatgcttcctgccacatacaaggttaagggaaacactga
tctggaatcctacagactgaaaaaacctattacaagagctgg
gaattccaggtcagccaaggctacacagagaaaccctgtctctgaaaaac
aaaacaaaacaaaacaaaaaaacaaaaacaaaaacaaaaaaaaacaatac
agatcaactttaactgggcaatgccagttaaatgaatacattccaacttc
tagtgtaggaaccgcctactcagagtacttctggcacctcaagtcttttc
agaattatcaacaatactgttttctcctgattatctaaagctagtttcat
atctattcgtattcacccctccccttatctgtgccccactacactacctc
caggttttaagttcagagctcttttagatgaataaagaaaacagcctatg
ctctggataaccaaagcttggcaacagacttttccgtctgtatttaatcc
gagtttgcagataaatacattacttttctcatttctaggaataatacata
ttcctagacagtattataaatatttgtattaaatccacagtacaggctgg
caagatggctaagtgggtaaaggtgcttgtcaccaaacctgacaaccaga
gtgtgattcctcaaacacacatagtagaatgagaaaatccccacaaactg
ttctcttacctccacaggtgtcctcacacatacacccaaataaatataaa
aaatgttataaaagaacaagtaaataaaattttacaataagggctggaaa
gatggctcagcagttaagagcactgactcctcttccagaggtcctgagtt
caattcccagcaaccacatggtggctcataaccatctataaaagggattc
gatgccctcttctcatgtgtctgaagacagctacagtatactcatataaa
taaaataaatcttaaaaaaaaactacaataaattcttattcaactgtcaa
caatgcctggaccatgatagggatcaggtaacagtaacgaatgacttagg
agatttgatcttgccatgataaaacacctatagcctagctctttagaact
gagccaggagaatagaaaaattgaagccagcctggactacatggtgaggc
ttgtcttttcacttgttttattcacctgtatatacatggttctgtacaag
tgtatgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_81095360_81096000
seq2: B6Ng01-206N08.b_41_682 (reverse)

seq1  CCAGCTCTTGTAATAGG-TTTTTCAGTCTGTGGGATTCCAGATCAGTGTT  49
      ||||||||||||||||| ||||||||||||| ||||||||||||||||||
seq2  CCAGCTCTTGTAATAGGTTTTTTCAGTCTGTAGGATTCCAGATCAGTGTT  50

seq1  TCCCTTAACCTTGTATGTGGCAGGAAGCATTAGGGTGGAGCGGAAGTTAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTAACCTTGTATGTGGCAGGAAGCATTAGGGTGGAGCGGAAGTTAT  100

seq1  CAGAAACTAGCACCCCACCCCCACCCCCTGGGCAGGCTGCACCGGGTACC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACTAGCACCCCACCCCCACCCCCTGGGCAGGCTGCACCGGGTACC  150

seq1  AAAGGATCCTACAAAAGATGGAGGGAAGCGGGCACTGGGTGTTCCACTTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATCCTACAAAAGATGGAGGGAAGCGGGCACTGGGTGTTCCACTTC  200

seq1  ACCTGGGCAGAAGAAAGGTCCAATTCATCTCCATGGACATTGCTACGTAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGCAGAAGAAAGGTCCAATTCATCTCCATGGACATTGCTACGTAT  250

seq1  TCATGGTTTACTCATGCACTGGGATGGGGGTAGGGGACATTTTCATGCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTTTACTCATGCACTGGGATGGGGGTAGGGGACATTTTCATGCAC  300

seq1  ATATATATTTCTACCTGCTCCGTTATACAAATGTTTGAGGTGGCTTACAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATTTCTACCTGCTCCGTTATACAAATGTTTGAGGTGGCTTACAA  350

seq1  ATATATATATATATATATATATATATATATAATATCAAGGAATGAAATAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATAATATCAAGGAATGAAATAG  400

seq1  GTATCATTAGAAACGGGAAGAGGAATTCAGAGGAGGGAAATAACGAAGCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATTAGAAACGGGAAGAGGAATTCAGAGGAGGGAAATAACGAAGCT  450

seq1  CATAACCATGCAGTAAGCTGCCCTGCACAGTTGTTAATGTGATCCATAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACCATGCAGTAAGCTGCCCTGCACAGTTGTTAATGTGATCCATAAA  500

seq1  CTTGGCTTTGGAAACCCCAGCAATCCAAAGCAAAACACGAACATTCGAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTTTGGAAACCCCAGCAATCCAAAGCAAAACACGAACATTCGAAC  550

seq1  ACAGGAAATGTAGAATACATAAACGAAAAAAAAACTGTAGTGTCACGGGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAATGTAGAATACATAAACGAAAAAAAAACTGTAGTGTCACGGGG  600

seq1  GAAGCACCATCTTGCCTTTGTATTGAAATTTGGGAGGAATTC  641
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACCATCTTGCCTTTGTATTGAAATTTGGGAGGAATTC  642

seq1: chr15_80991039_80992150
seq2: B6Ng01-206N08.g_65_1172

seq1  GAATTCCAGGTCAGCCAAGGCTACACAGAGAAACCCTGTCTCTGAAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTCAGCCAAGGCTACACAGAGAAACCCTGTCTCTGAAAAAC  50

seq1  AAAACAAAACAAAACAAAAAAACAAAAACAAAAACAAAAAAAAACAATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAACAAAACAAAAAAACAAAAACAAAAACAAAAAAAAACAATAC  100

seq1  AGATCAACTTTAACTGGGCAATGCCAGTTAAATGAATACATTCCAACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAACTTTAACTGGGCAATGCCAGTTAAATGAATACATTCCAACTTC  150

seq1  TAGTGTAGGAACCGCCTACTCAGAGTACTTCTGGCACCTCAAGTCTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTAGGAACCGCCTACTCAGAGTACTTCTGGCACCTCAAGTCTTTTC  200

seq1  AGAATTATCAACAATACTGTTTTCTCCTGATTATCTAAAGCTAGTTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTATCAACAATACTGTTTTCTCCTGATTATCTAAAGCTAGTTTCAT  250

seq1  ATCTATTCGTATTCACCCCTCCCCTTATCTGTGCCCCACTACACTACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTCGTATTCACCCCTCCCCTTATCTGTGCCCCACTACACTACCTC  300

seq1  CAGGTTTTAAGTTCAGAGCTCTTTTAGATGAATAAAGAAAACAGCCTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTTAAGTTCAGAGCTCTTTTAGATGAATAAAGAAAACAGCCTATG  350

seq1  CTCTGGATAACCAAAGCTTGGCAACAGACTTTTCCGTCTGTATTTAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGATAACCAAAGCTTGGCAACAGACTTTTCCGTCTGTATTTAATCC  400

seq1  GAGTTTGCAGATAAATACATTACTTTTCTCATTTCTAGGAATAATACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGCAGATAAATACATTACTTTTCTCATTTCTAGGAATAATACATA  450

seq1  TTCCTAGACAGTATTATAAATATTTGTATTAAATCCACAGTACAGGCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGACAGTATTATAAATATTTGTATTAAATCCACAGTACAGGCTGG  500

seq1  CAAGATGGCTAAGTGGGTAAAGGTGCTTGTCACCAAACCTGACAACCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGGCTAAGTGGGTAAAGGTGCTTGTCACCAAACCTGACAACCAGA  550

seq1  GTGTGATTCCTCAAACACACATAGTAGAATGAGAAAATCCCCACAAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATTCCTCAAACACACATAGTAGAATGAGAAAATCCCCACAAACTG  600

seq1  TTCTCTTACCTCCACAGGTGTCCTCACACATACACCCAAATAAATATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTACCTCCACAGGTGTCCTCACACATACACCCAAATAAATATAAA  650

seq1  AAATGTTATAAAAGAACAAGTAAATAAAATTTTACAATAAGGGCTGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTATAAAAGAACAAGTAAATAAAATTTTACAATAAGGGCTGGAAA  700

seq1  GATGGCTCAGCAGTTAAGAGCACTGACTCCTCTTCCAGAGGTCCTGAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTCAGCAGTTAAGAGCACTGACTCCTCTTCCAGAGGTCCTGAGTT  750

seq1  CAATTCCCAGCAACCACATGGTGGCTCATAACCATCTATAAAAGGGATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCCCAGCAACCACATGGTGGCTCATAACCATCTATAAAAGGGATTC  800

seq1  GATGCCCTCTTCTCATGTGTCTGAAGACAGCTACAGTATACTCATATAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCCTCTTCTCATGTGTCTGAAGACAGCTACAGTATACTCATATAAA  850

seq1  TAAAATAAATCTTAAAAAAAAACTACAATAAATTCTTATTCAACTGTCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAATCTTAAAAAAAAACTACAATAAATTCTTATTCAACTGTCAA  900

seq1  CAATGCCTGGACCATGATAGGGATCAGGTAACAGTTAACGAATGACTTAG  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CAATGCCTGGACCATGATAGGGATCAGGTAACAG-TAACGAATGACTTAG  949

seq1  GAGGATTTTGATC-TGGCATGAT-AAACACCTATAAGCCTAGCTCTTTAG  998
      |||   ||||||| || |||||| |||||||||| |||||||||||||||
seq2  GAG--ATTTGATCTTGCCATGATAAAACACCTAT-AGCCTAGCTCTTTAG  996

seq1  AACTGAGGCAGGAGGATAGAAAATTTGAGGCCAGCCTGGACTACATGGTG  1048
      ||||||| |||||| |||||||| |||| |||||||||||||||||||||
seq2  AACTGAGCCAGGAGAATAGAAAAATTGAAGCCAGCCTGGACTACATGGTG  1046

seq1  AGGGCTGTCTTTTCACTTTGTTTTTATTCACTTGTATATACATGTGTCTG  1098
      |||  |||||||||||||   |||||||||| ||||||||||||  ||||
seq2  AGGCTTGTCTTTTCACTT--GTTTTATTCACCTGTATATACATGGTTCTG  1094

seq1  TACAAGTGTATGCC  1112
      ||||||||||||||
seq2  TACAAGTGTATGCC  1108