BAC Information

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BAC

Clone NameB6Ng01-206P16
Chromosome15 (Build37)
Map Location 94,467,139 - 94,655,846
singlet/doubletdoublet
Overlap geneTmem117
Upstream geneZfp42-ps1, LOC100042627, LOC100042631, D630010B17Rik, Adamts20, Pus7l, Irak4, Twf1
Downstream geneLOC100043315, Nell2, Dbx2, LOC100042684, LOC667849, EG629300, LOC667864, Tmem16f, LOC100043329
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206P16.bB6Ng01-206P16.g
ACCGA026252GA026253
length6751,007
definitionB6Ng01-206P16.b B6Ng01-206P16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,655,232 - 94,655,846)(94,467,139 - 94,468,161)
sequence
gaattcaatgatgtttgcgtgggtggggttgttttgtttgtttgtttcat
aattccttttatcttcctggtttttctttgtatattatgctttcctattt
tgtgcttttataggtttcgttttgtctgtgtgtatatctgtatttctttt
gttggggtctttttgttttttacttctggtttgtttacttgtttcatttg
cctatgtttctgttttccaaaagagagaacgaaaacacagagttggatgg
atgaggatgtgggtaggccctagaaggagttggggaaagagaaatcatga
tcaaaatatagtggttgagataactattgtcaaatatgaacatacatata
cgtacgcgtgtgtgtgagagagaggtctcctaatatgtatctatatacat
catatatatccatatatatgtggagatagatagatagatagatagataga
tagatacatacatacatacatacatacatacatacatacatacatacata
ttaggagacctagtgtagctcaggaagatgccaaaggaaaattattctat
gatacaatcaagctgttatgattctgggtttatgtcagtaaggaataatt
acaacagagtccaatctaattacagaaaacatactttttcaccttacttg
tatatatgaaaaactagtaattacc
gaattccaggtctgctagggcaacatacatggagaaaccttgtcccaaga
aacaagatggggaagaagaggaagatgaggaggacagctgtcatctccac
ctggggaaacatcctacttagccttggccatgtctttctctgtgaaagcg
tcctttttttttttttttttttttgtttttgttttttgttttgtcactcc
cagaagcacaatggtccagctctgcccacccacttccacccctgggggaa
atgcttagtatagacttggctatattaaatatttcctgaaattcaaccag
actctaaaggtttttttttttttttttttttgaaatttctgcccatatgc
ccatttaatgatgtctagaaatagatttggaagcatatcccatatccatc
aaattacttactcaccgctgtgcaaaaacagatttgggctgggtttgtta
atatgtattttacttttgcatcacttgatcttttaagtggcttcctagta
ttgtcataagataaactgtctaaaagcatcacaaagatgttgtgcttccc
ccctccatgtcatcgtcaccatagtcatgatctcattaaaacaaaacaaa
acaaaacacaatggtctcatgtagcccagactggcgtcaaacttggttag
ttcaagctgggcttgaacttgtaaaattccatcttttacctcccaagtgt
tgggattacaggtgtgtgccatcaagcctggctatcaccttagctttgtt
cttccctctcttgtcccctccccccaccaaagatttatttattatatcta
agtacactatagctgtcttcagagaacaacccagaagagggcattcagat
ctcattacaggatggctgtggagctactatatagtgctgggaattgatca
gacttggaagagcatcagtgctaataacactgagcatctctcaggccctc
ttctcttttatcttctcactagttctcatgataggagataaataacctgt
cgtggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_94655232_94655846
seq2: B6Ng01-206P16.b_105_720 (reverse)

seq1  GGTAATTACTAG-TTTTCATATATACAAGTAAGGTGAAAAAGTATGTTTT  49
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGTAATTACTAGTTTTTCATATATACAAGTAAGGTGAAAAAGTATGTTTT  50

seq1  CTGTAATTAGATTGGACTCTGTTGTAATTATTCCTTACTGACATAAACCC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATTAGATTGGACTCTGTTGTAATTATTCCTTACTGACATAAACCC  100

seq1  AGAATCATAACAGCTTGATTGTATCATAGAATAATTTTCCTTTGGCATCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCATAACAGCTTGATTGTATCATAGAATAATTTTCCTTTGGCATCT  150

seq1  TCCTGAGCTACACTAGGTCTCCTAATATGTATGTATGTATGTATGTATGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGCTACACTAGGTCTCCTAATATGTATGTATGTATGTATGTATGT  200

seq1  ATGTATGTATGTATGTATGTATCTATCTATCTATCTATCTATCTATCTAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTATGTATGTATGTATCTATCTATCTATCTATCTATCTATCTAT  250

seq1  CTCCACATATATATGGATATATATGATGTATATAGATACATATTAGGAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACATATATATGGATATATATGATGTATATAGATACATATTAGGAGA  300

seq1  CCTCTCTCTCACACACACACGTACGTATATGTATGTTCATATTTGACAAT  349
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCTCTCTCTCACACACACGCGTACGTATATGTATGTTCATATTTGACAAT  350

seq1  AGTTATCTCAACCACTATATTTTGATCATGATTTCTCTTTCCCCAACTCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCTCAACCACTATATTTTGATCATGATTTCTCTTTCCCCAACTCC  400

seq1  TTCTAGGGCCTACCCACATCCTCATCCATCCAACTCTGTGTTTTCGTTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGGCCTACCCACATCCTCATCCATCCAACTCTGTGTTTTCGTTCT  450

seq1  CTCTTTTGGAAAACAGAAACATAGGCAAATGAAACAAGTAAACAAACCAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTGGAAAACAGAAACATAGGCAAATGAAACAAGTAAACAAACCAG  500

seq1  AAGTAAAAAACAAAAAGACCCCAACAAAAGAAATACAGATATACACACAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAAAACAAAAAGACCCCAACAAAAGAAATACAGATATACACACAG  550

seq1  ACAAAACGAAACCTATAAAAGCACAAAATAGGAAAGCATAATATACAAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACGAAACCTATAAAAGCACAAAATAGGAAAGCATAATATACAAAG  600

seq1  AAAAACCAGGAAGATA  615
      ||||||||||||||||
seq2  AAAAACCAGGAAGATA  616

seq1: chr15_94467139_94468161
seq2: B6Ng01-206P16.g_67_1073

seq1  GAATTCCAGGTCTGCTAGGGCAACATACATGGAGAAACCTTGTCCCAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTCTGCTAGGGCAACATACATGGAGAAACCTTGTCCCAAGA  50

seq1  AACAAGATGGGGAAGAAGAGGAAGATGAGGAGGACAGCTGTCATCTCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGATGGGGAAGAAGAGGAAGATGAGGAGGACAGCTGTCATCTCCAC  100

seq1  CTGGGGAAACATCCTACTTAGCCTTGGCCATGTCTTTCTCTGTGAAAGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGAAACATCCTACTTAGCCTTGGCCATGTCTTTCTCTGTGAAAGCG  150

seq1  TCCTTTTTTTTTTTTTTTTTTTTTGTTTTTGTTTTTTGTTTTGTCACTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTTTTTTTTTTTTTTTTTTGTTTTTGTTTTTTGTTTTGTCACTCC  200

seq1  CAGAAGCACAATGGTCCAGCTCTGCCCACCCACTTCCACCCCTGGGGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCACAATGGTCCAGCTCTGCCCACCCACTTCCACCCCTGGGGGAA  250

seq1  ATGCTTAGTATAGACTTGGCTATATTAAATATTTCCTGAAATTCAACCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTAGTATAGACTTGGCTATATTAAATATTTCCTGAAATTCAACCAG  300

seq1  ACTCTAAAGGTTTTTTTTTTTTTTTTTTTTTGAAATTTCTGCCCATATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAAAGGTTTTTTTTTTTTTTTTTTTTTGAAATTTCTGCCCATATGC  350

seq1  CCATTTAATGATGTCTAGAAATAGATTTGGAAGCATATCCCATATCCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAATGATGTCTAGAAATAGATTTGGAAGCATATCCCATATCCATC  400

seq1  AAATTACTTACTCACCGCTGTGCAGAGACAGATTTGGGCTGTGTTTGTTA  450
      |||||||||||||||||||||||| | |||||||||||||| ||||||||
seq2  AAATTACTTACTCACCGCTGTGCAAAAACAGATTTGGGCTGGGTTTGTTA  450

seq1  ATATGTATTTTACTTTTGCATCACTTGATCTTTTAAGTGGCTTCGTAGTA  500
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATATGTATTTTACTTTTGCATCACTTGATCTTTTAAGTGGCTTCCTAGTA  500

seq1  TTGTCATAAGATAAACTGTCTAAAAGCATCACAAAGATGTTGTGCTTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATAAGATAAACTGTCTAAAAGCATCACAAAGATGTTGTGCTTCCC  550

seq1  CCCTCCATGTCATCGTCACCATAGTCATGATCTCATTAAAACAAAACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCATGTCATCGTCACCATAGTCATGATCTCATTAAAACAAAACAAA  600

seq1  ACAAAACACAATGGTCTCATGTAGCCCAGACTGGCGTCAAACTTGGTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACACAATGGTCTCATGTAGCCCAGACTGGCGTCAAACTTGGTTAG  650

seq1  TTCAAGCTGGGCTTGAACTTGTAAAATTCCATCTTTTACCTCCCAAGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCTGGGCTTGAACTTGTAAAATTCCATCTTTTACCTCCCAAGTGT  700

seq1  TGGGATTACAGGTGTGTGCCATCAAGCCTGGCTATCACCTTAGCTTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTACAGGTGTGTGCCATCAAGCCTGGCTATCACCTTAGCTTTGTT  750

seq1  CTTCCCTCTCTTGTCCCCT-CCCCCACCAAAGATTTATTTATTATATCTA  799
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTCCCTCTCTTGTCCCCTCCCCCCACCAAAGATTTATTTATTATATCTA  800

seq1  AGTACACTATAGCTGTCTTCAGAG-ACACCCCAGAAGAGGGCATTCAGAT  848
      |||||||||||||||||||||||| ||| |||||||||||||||||||||
seq2  AGTACACTATAGCTGTCTTCAGAGAACAACCCAGAAGAGGGCATTCAGAT  850

seq1  CTCATTACA-GATGGCTGT-GAGCTACTATATAGTTGCTGGGATTTGAAT  896
      ||||||||| ||||||||| |||||||||||||| |||||||| ||||  
seq2  CTCATTACAGGATGGCTGTGGAGCTACTATATAG-TGCTGGGAATTGA--  897

seq1  TCAGGACCTTTGGAAGAGCATTCAGTGCTAATAACCACTGAGCCATCTCT  946
      ||| |||  ||||||||||| ||||||||||||| ||||||| |||||||
seq2  TCA-GAC--TTGGAAGAGCA-TCAGTGCTAATAA-CACTGAG-CATCTCT  941

seq1  CCAGGCCCTCTCTTCTCTTTTATCTTCTCACTAGTCCTCAAATGATAGGA  996
       ||||||  |||||||||||||||||||||||||| |||  |||||||||
seq2  -CAGGCC--CTCTTCTCTTTTATCTTCTCACTAGTTCTC--ATGATAGGA  986

seq1  GATTAAAAATAAACCTGGTCGGTGGTG  1023
      |||   |||| ||||| ||| ||||||
seq2  GAT---AAAT-AACCT-GTC-GTGGTG  1007