BAC Information

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BAC

Clone NameB6Ng01-207G24
Chromosome15 (Build37)
Map Location 54,027,870 - 54,029,024
singlet/doubletsinglet
Overlap genenone
Upstream geneExt1, Samd12, EG665097, EG621631
Downstream geneTnfrsf11b, LOC665280, EG383032, Colec10, Mal2, Nov, LOC665302, LOC100039816, Enpp2, LOC100039911, LOC100039822, Taf2, 2600005O03Rik, Depdc6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207G24.bB6Ng01-207G24.g
ACCGA026588GA026589
length1,2311,165
definitionB6Ng01-207G24.b B6Ng01-207G24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagaccttcaaagaagacctaatacgcttcaaactattcca
caaaatagaaacagaaagaacactacccactttgtcctatgaagtcacaa
ttatgctgatacctaaaccacacaaagatgtaacaaagaaagagaacttc
acaccaatttcccttatgaacatcaatgcaaagatactcaataaaattct
tgccaaccaaatccaagaacacatcaaaatgatcattcaccatgatcaaa
caggcttcatcccagggatgcggggatatttcagtatatggaaatccatc
aatgtaatactctatataaacaaactcaagggaaaaaaaacacatgatca
tttaattagatgctgaaaatacatttgatattattcaacatcccttcatg
ttaaaaatcttggaaagatcaggaattcaaggcccatacctaaacatagt
aaaagcaaaccagtagtcaacatcaaactagatggagagaaacttgaagc
aatcccactaaaattagggtctagacaagactgctctctctttccctatc
tattccatattgtacttgatattttagctagaacaattagagaacaaaag
gaagtcaaagggatacaaattggaaaggaagaagtcaaatatcactattt
gcaggtgatatgatagtataattaagttacccccaaaactccaccagaga
actcctacagctgatacacagcttcagcaaagtggccagaaataaaatta
actcaaatcagtagccttcttatactcaaaggataaacaggctgagaaag
aaactagggaaatgacaaccttgatgacaatcacaaacaatatatcttag
tgtgactctaaccaaagaagtaaaagatatatatgacaagaacttcaagt
ctctgaaggaaatcgaagaagacctcaggaagatggaaagatctcccatt
gctgctgaattggcatgattaatatagtaaaaatgaccaatcttgaacaa
aagcaatctacaaaattcaatgcaatgccatcaagtttcaaatccacttc
ttcataggaggttaagaaaggagccaattctccaaattcatctggaatta
caaaaaccagggaataacaaaacttattcacagccataaaggaccttctg
agaatcagcatcctgaattcagcctgtatctaacggcccaatagatgtaa
ttaaacaactgttatagagatgatgattgcg
gaattcttttgcaatgtttaaaaaaaaaatgtgtccttgctgtctcctaa
gaattaagaggctggcgtaacaggctgctgattcataggaggatcaaaaa
gaagctgggagtaaatgactgcattgataagtaaagtaaaagactgggtt
tataatctgcaagagatgagccattcagagaattctttagaacagcaaga
gagaacttcttggtgaactgtcttgagcagaaaatagagagaaagagctt
tctggagatctgcacagaaagtagagcagacaaagcagtctggaaagctg
ccttaagcagaatttaggccatacgcatgaggcttggaccaacaataaca
cttcaaatcatttgttttcatggcttgcagataccccttctctcagaacc
cctctccaaggtgaggctggtccttggccagcatactaatacatatatta
aagtttgggtttccatgatcaaacatgcacacaaacacagtgtcagagtg
gtgagaaaaattttgaaattcattcagtaagagtatctttcttccatgac
tcccactgccaaacacacataaaataatatgtttatactggctcctatca
cagcagttttccacagaccaatcaatgaaagtcctcatctgttctactta
agaactgtaggattgcacttgggataaatcaaagttctggtgatttctga
gaggtttgttatattttttaaattttttctatacctttaaagctactgct
cacatgtaaaaaatatgtaatagtggagaacccactgtatgtttctgcct
gacattttcaaatatattcagcgtcagaccttattgaagtgacatcatca
ttcttactgctgatactcaacatgtaaagctttgctttgtgtacaagttt
tgatgtccattttgttcctgaattgttccttctcaaacaaacaaacaaac
aaaaacaaacaaaaccaaataaacacatcactcaaggaagaataagaaaa
aaaaggaaaagtagatttattagtgactcttcttctcttctcattgctat
gacccttacaacgccatttatggagagaggtacttatttgggctcatcag
aataggacgacaccagcataccatatggtgtgaacgcattgagcagagag
agagatggaaaatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_54027870_54029024
seq2: B6Ng01-207G24.g_62_1226 (reverse)

seq1  GTATT---CATCTCTCT---TGCTC-ATGCCTTCACA-CATATGGTATGC  42
      |||||   |||||||||   ||||| |||| |||||| ||||||||||||
seq2  GTATTTTCCATCTCTCTCTCTGCTCAATGCGTTCACACCATATGGTATGC  50

seq1  T-GTGTCCTTCTTATCTGATGAGCCAAAATAAGTCCCTCTCTCCATAAAT  91
      | ||||| | ||  ||||||||||| |||||||| |||||||||||||||
seq2  TGGTGTCGTCCTATTCTGATGAGCCCAAATAAGTACCTCTCTCCATAAAT  100

seq1  GGCCTTTGTAGGGTCATAGCAATGAGAAGAG-AGAAGAGTCACTAATAAA  140
      ||| ||   |||||||||||||||||||||| ||||||||||||||||||
seq2  GGCGTTGTAAGGGTCATAGCAATGAGAAGAGAAGAAGAGTCACTAATAAA  150

seq1  TCTACCTTTTC-TTTTTTTCTTATTCTTCC-TGAGTTGTTGTTGTTTTAT  188
      ||||| ||| | |||||||||||||||||| ||||    || ||| ||  
seq2  TCTACTTTTCCTTTTTTTTCTTATTCTTCCTTGAG----TGATGTGTTTA  196

seq1  TTTTGTTTTGTTTTGTTTTTGTTTGTTTGTTTGTTTGAGAAGGAAC-ATT  237
      ||| |||||| ||||||||||||||||||||||||||||||||||| |||
seq2  TTTGGTTTTG-TTTGTTTTTGTTTGTTTGTTTGTTTGAGAAGGAACAATT  245

seq1  CAGG-ACAAAATGGACATCAAAACTTGTACACAAAGCAAAGCTTTACATG  286
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACAAAATGGACATCAAAACTTGTACACAAAGCAAAGCTTTACATG  295

seq1  TTGAGTATCAGCAGTAAGAATGATGATGTCACTTCAATAAGGTCTGACGC  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTATCAGCAGTAAGAATGATGATGTCACTTCAATAAGGTCTGACGC  345

seq1  TGAATATATTTG-AAATGTCAGGCAGAAACATACAGTGGGTTCTCCACTA  385
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGAATATATTTGAAAATGTCAGGCAGAAACATACAGTGGGTTCTCCACTA  395

seq1  TTACATATTTTTTACATGTGAGCAGTAGCTTTAAAGGTATAGAAAAAATT  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATATTTTTTACATGTGAGCAGTAGCTTTAAAGGTATAGAAAAAATT  445

seq1  TAAAAAATATAACAAACCTCTCAGAAATCACCAGAACTTTGATTTATCCC  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATATAACAAACCTCTCAGAAATCACCAGAACTTTGATTTATCCC  495

seq1  AAGTGCAATCCTACAGTTCTTAAGTAGAACAGATGAGGACTTTCATTGAT  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCAATCCTACAGTTCTTAAGTAGAACAGATGAGGACTTTCATTGAT  545

seq1  TGGTCTGTGGAAAACTGCTGTGATAGGAGCCAGTATAAACATATTATTTT  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGTGGAAAACTGCTGTGATAGGAGCCAGTATAAACATATTATTTT  595

seq1  ATGTGTGTTTGGCAGTGGGAGTCATGGAAGAAAGATACTCTTACTGAATG  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTTTGGCAGTGGGAGTCATGGAAGAAAGATACTCTTACTGAATG  645

seq1  AATTTCAAAATTTTTCTCACCACTCTGACACTGTGTTTGTGTGCATGTTT  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAAAATTTTTCTCACCACTCTGACACTGTGTTTGTGTGCATGTTT  695

seq1  GATCATGGAAACCCAAACTTTAATATATGTATTAGTATGCTGGCCAAGGA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGGAAACCCAAACTTTAATATATGTATTAGTATGCTGGCCAAGGA  745

seq1  CCAGCCTCACCTTGGAGAGGGGTTCTGAGAGAAGGGGTATCTGCAAGCCA  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTCACCTTGGAGAGGGGTTCTGAGAGAAGGGGTATCTGCAAGCCA  795

seq1  TGAAAACAAATGATTTGAAGTGTTATTGTTGGTCCAAGCCTCATGCGTAT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAAATGATTTGAAGTGTTATTGTTGGTCCAAGCCTCATGCGTAT  845

seq1  GGCCTAAATTCTGCTTAAGGCAGCTTTCCAGACTGCTTTGTCTGCTCTAC  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAAATTCTGCTTAAGGCAGCTTTCCAGACTGCTTTGTCTGCTCTAC  895

seq1  TTTCTGTGCAGATCTCCAGAAAGCTCTTTCTCTCTATTTTCTGCTCAAGA  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGCAGATCTCCAGAAAGCTCTTTCTCTCTATTTTCTGCTCAAGA  945

seq1  CAGTTCACCAAGAAGTTCTCTCTTGCTGTTCTAAAGAATTCTCTGAATGG  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCACCAAGAAGTTCTCTCTTGCTGTTCTAAAGAATTCTCTGAATGG  995

seq1  CTCATCTCTTGCAGATTATAAACCCAGTCTTTTACTTTACTTATCAATGC  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTCTTGCAGATTATAAACCCAGTCTTTTACTTTACTTATCAATGC  1045

seq1  AGTCATTTACTCCCAGCTTCTTTTTGATCCTCCTATGAATCAGCAGCCTG  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTTACTCCCAGCTTCTTTTTGATCCTCCTATGAATCAGCAGCCTG  1095

seq1  TTACGCCAGCCTCTTAATTCTTAGGAGACAGCAAGGACACATTTTTTTTT  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGCCAGCCTCTTAATTCTTAGGAGACAGCAAGGACACATTTTTTTTT  1145

seq1  TAAACATTGCAAAAGAATTC  1155
      ||||||||||||||||||||
seq2  TAAACATTGCAAAAGAATTC  1165