BAC Information

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BAC

Clone NameB6Ng01-207H11
Chromosome15 (Build37)
Map Location 88,180,932 - 88,322,123
singlet/doubletdoublet
Overlap genenone
Upstream geneAW049604, LOC100042329, LOC100042340
Downstream geneZdhhc25, Brd1, Zbed4, Alg12, Creld2, Pim3, 1700019P01Rik, Mlc1, LOC667558, Mov10l1, Panx2, Trabd, 1300018J18Rik, Hdac10, Mapk12, Mapk11, Plxnb2, LOC100043185, 1700027J05Rik, Saps2, Sbf1, Adm2, Miox, Tmem112b, Ncaph2, Ecgf1, 2010001J22Rik, Klhdc7b, 1700007E06Rik, Cpt1b, Chkb, C730034F03Rik, Mapk8ip2, Arsa
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207H11.bB6Ng01-207H11.g
ACCGA026608GA026609
length1,070710
definitionB6Ng01-207H11.b B6Ng01-207H11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,180,932 - 88,181,993)(88,321,414 - 88,322,123)
sequence
gaattcttacttacactcaaagttaggccagctgccctttaacctcaaaa
gtctgaattaccatcccataccattttcaatatgcaggagaagtctgctg
gttccatcaggctttatagttgaatgccgagagtggagactcccttccag
tatttggaagcagagtgacggcctccatgctgtgaacaggcagcctcaca
agctctcagttcagtcatgccttgaattctattctcaggatgttaagact
cgggattcccacaggctgggcagtcctcccggctctcccatcctcaccag
actcagggatgcaaatatcctgcactttaccctccctagagactttatga
gttggcatattttgtctttgtgggcaactacagagttggcagatgagtga
gagacctgcgacagaagaatcggcgctggccagtgagaactggtgctgcc
cgataccacagtcacggttccaccttggagctccttcttgcccggagaca
gagggtctaacacagacctaacagatttcaagagtctttctcagctcttc
catgggatttggaacattctaaacgcatcaagggatagcaatgtctccat
ctcctgagtggtggtgacaccacccaaaacattttcttggaaccaccatc
acttgggcctcagcttcacttgggaccttcggctctgggttctgcctcag
attctcccatgccactcacctcatggacttcagagaacagtgtcacctgt
tattcagaagacagagcatggcacttggcaccgatgagctttctgaggac
agtgggcagagaaggcaaagaatgagctggggagagacatgggcaaagtt
acagaggatgttagtgttgtgagaagaggcatcacttctgtgccagcacc
aagggaccagctcatgtggcaagactggaaccagagcagccaggagttca
aggaacctcctaagaattgtcccagcactgacagggccggaagggaaaga
agaaaatggaagccgtccctgggtctgaggagcacttgcttcagaacaca
tttgaaatgagtccctaaga
gaattccctaactaaagcctaccagggttaattcctcctattaaatccta
agaaataataagtagaagtaacaagtaataaggcttttgaaaaacactca
ccaggcaacggactgtacctttgatgacggaatgcctaaaagttgaacac
agaaatatttgtaaggaaaaaatttcagtcccaggtggctactagaacat
tctatctaatattaaagaaagaaataatgttggcagtacacaatgtcttt
caaaagataagaaggggagttgaccctctcttaaaggcccctgtaacagc
agtaacaaccagaagtagcttcatgatggcagagaccagttcgtccagta
tgcccagaggggtcaacaaagtttaaaccggtcagacccattctcaacaa
tgttatacacaagcagggcttctctcgggaagcaaacttgttgttgccat
tcaaaatcagtgtcatttgccaccacaagggcagaaagcagaaagagaca
tcacattcataacccggggtagacacagaaagagaatttcacgtgatttg
atactctgtaaagatagggatgcttagggaactaggtcagggctgtctgt
gtagacttgcagcgagaatccagtgcagactgccaatcacactgctgagc
acggggttggagcgtggatttctgccttattgtggagctttgtcggggtg
ggggatgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_88180932_88181993
seq2: B6Ng01-207H11.b_45_1114

seq1  GAATTCTTACTTACACTCAAAGTTAGGCCAGCTGCCCTTTAACCTCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTTACACTCAAAGTTAGGCCAGCTGCCCTTTAACCTCAAAA  50

seq1  GTCTGAATTACCATCCCATACCATTTTCAATATGCAGGAGAAGTCTGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAATTACCATCCCATACCATTTTCAATATGCAGGAGAAGTCTGCTG  100

seq1  GTTCCATCAGGCTTTATAGTTGAATGCCGAGAGTGGAGACTCCCTTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATCAGGCTTTATAGTTGAATGCCGAGAGTGGAGACTCCCTTCCAG  150

seq1  TATTTGGAAGCAGAGTGACGGCCTCCATGCTGTGAACAGGCAGCCTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGAAGCAGAGTGACGGCCTCCATGCTGTGAACAGGCAGCCTCACA  200

seq1  AGCTCTCAGTTCAGTCATGCCTTGAATTCTATTCTCAGGATGTTAAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCAGTTCAGTCATGCCTTGAATTCTATTCTCAGGATGTTAAGACT  250

seq1  CGGGATTCCCACAGGCTGGGCAGTCCTCCCGGCTCTCCCATCCTCACCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGATTCCCACAGGCTGGGCAGTCCTCCCGGCTCTCCCATCCTCACCAG  300

seq1  ACTCAGGGATGCAAATATCCTGCACTTTACCCTCCCTAGAGACTTTATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGGATGCAAATATCCTGCACTTTACCCTCCCTAGAGACTTTATGA  350

seq1  GTTGGCATATTTTGTCTTTGTGGGCAACTACAGAGTTGGCAGATGAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCATATTTTGTCTTTGTGGGCAACTACAGAGTTGGCAGATGAGTGA  400

seq1  GAGACCTGCGACAGAAGAATCGGCGCTGGCCAGTGAGAACTGGTGCTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTGCGACAGAAGAATCGGCGCTGGCCAGTGAGAACTGGTGCTGCC  450

seq1  CGATACCACAGTCACGGTTCCACCTTGGAGCTCCTTCTTGCCCGGAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATACCACAGTCACGGTTCCACCTTGGAGCTCCTTCTTGCCCGGAGACA  500

seq1  GAGGGTCTAACACAGACCTAACAGATTTCAAGAGTCTTTCTCAGCTCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTCTAACACAGACCTAACAGATTTCAAGAGTCTTTCTCAGCTCTTC  550

seq1  CATGGGATTTGGAACATTCTAAACGCATCAAGGGATAGCAATGTCTCCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGATTTGGAACATTCTAAACGCATCAAGGGATAGCAATGTCTCCAT  600

seq1  CTCCTGAGTGGTGGTGACACCACCCAAAACATTTTCTTGGAACCACCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGAGTGGTGGTGACACCACCCAAAACATTTTCTTGGAACCACCATC  650

seq1  ACTTGGGCCTCAGCTTCACTTGGGACCTTCGGCTCTGGGTTCTGCCTCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGCCTCAGCTTCACTTGGGACCTTCGGCTCTGGGTTCTGCCTCAG  700

seq1  ATTCTCCCATGCCACTCACCTCATGGACTTCAGAGAACAGTGTCACCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCCATGCCACTCACCTCATGGACTTCAGAGAACAGTGTCACCTGT  750

seq1  TATTCAGAAGACAGAGCATGGCACTTGGCACCGATGAGCTTTCTGAGGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGAAGACAGAGCATGGCACTTGGCACCGATGAGCTTTCTGAGGAC  800

seq1  AGTGGGCAGAGAAGGCAAAGAATGAGCTGGGGAGAGACATGGGCAAAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGCAGAGAAGGCAAAGAATGAGCTGGGGAGAGACATGGGCAAAGTT  850

seq1  ACAGAGGATGTTAGTGTTGTGAGAAGAGGCATCACTTCTGTGCCAGCACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGATGTTAGTGTTGTGAGAAGAGGCATCACTTCTGTGCCAGCACC  900

seq1  AAGGGACCAGCTCATGTGGCAAGACTGGAACCAGAGCAGCCAGGAG-TCA  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGGGACCAGCTCATGTGGCAAGACTGGAACCAGAGCAGCCAGGAGTTCA  950

seq1  AGGAACCTCC-AAG-ATTGTCCCAGCACTGACAGG--CCGAAGGGAAAGA  995
      |||||||||| ||| ||||||||||||||||||||  | |||||||||||
seq2  AGGAACCTCCTAAGAATTGTCCCAGCACTGACAGGGCCGGAAGGGAAAGA  1000

seq1  --GACATGGAAGCGGTCCCTGGGTCTGAGGAGCACTTGCTTCAG-ACACA  1042
         | |||||||| |||||||||||||||||||||||||||||| |||||
seq2  AGAAAATGGAAGCCGTCCCTGGGTCTGAGGAGCACTTGCTTCAGAACACA  1050

seq1  TTGGAAATGAGTCCCCAAGA  1062
      || |||||||||||| ||||
seq2  TTTGAAATGAGTCCCTAAGA  1070

seq1: chr15_88321414_88322123
seq2: B6Ng01-207H11.g_66_775 (reverse)

seq1  CCCCATCCCCCACCCCGACAAAGCTCCACAATAAGGCAGAAATCCACGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCCCCCACCCCGACAAAGCTCCACAATAAGGCAGAAATCCACGCT  50

seq1  CCAACCCCGTGCTCAGCAGTGTGATTGGCAGTCTGCACTGGATTCTCGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCCGTGCTCAGCAGTGTGATTGGCAGTCTGCACTGGATTCTCGCT  100

seq1  GCAAGTCTACACAGACAGCCCTGACCTAGTTCCCTAAGCATCCCTATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCTACACAGACAGCCCTGACCTAGTTCCCTAAGCATCCCTATCTT  150

seq1  TACAGAGTATCAAATCACGTGAAATTCTCTTTCTGTGTCTACCCCGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGTATCAAATCACGTGAAATTCTCTTTCTGTGTCTACCCCGGGTT  200

seq1  ATGAATGTGATGTCTCTTTCTGCTTTCTGCCCTTGTGGTGGCAAATGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGTGATGTCTCTTTCTGCTTTCTGCCCTTGTGGTGGCAAATGACA  250

seq1  CTGATTTTGAATGGCAACAACAAGTTTGCTTCCCGAGAGAAGCCCTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTTGAATGGCAACAACAAGTTTGCTTCCCGAGAGAAGCCCTGCTT  300

seq1  GTGTATAACATTGTTGAGAATGGGTCTGACCGGTTTAAACTTTGTTGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATAACATTGTTGAGAATGGGTCTGACCGGTTTAAACTTTGTTGACC  350

seq1  CCTCTGGGCATACTGGACGAACTGGTCTCTGCCATCATGAAGCTACTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGGCATACTGGACGAACTGGTCTCTGCCATCATGAAGCTACTTCT  400

seq1  GGTTGTTACTGCTGTTACAGGGGCCTTTAAGAGAGGGTCAACTCCCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTACTGCTGTTACAGGGGCCTTTAAGAGAGGGTCAACTCCCCTTC  450

seq1  TTATCTTTTGAAAGACATTGTGTACTGCCAACATTATTTCTTTCTTTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTTGAAAGACATTGTGTACTGCCAACATTATTTCTTTCTTTAAT  500

seq1  ATTAGATAGAATGTTCTAGTAGCCACCTGGGACTGAAATTTTTTCCTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATAGAATGTTCTAGTAGCCACCTGGGACTGAAATTTTTTCCTTAC  550

seq1  AAATATTTCTGTGTTCAACTTTTAGGCATTCCGTCATCAAAGGTACAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTCTGTGTTCAACTTTTAGGCATTCCGTCATCAAAGGTACAGTC  600

seq1  CGTTGCCTGGTGAGTGTTTTTCAAAAGCCTTATTACTTGTTACTTCTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGCCTGGTGAGTGTTTTTCAAAAGCCTTATTACTTGTTACTTCTACT  650

seq1  TATTATTTCTTAGGATTTAATAGGAGGAATTAACCCTGGTAGGCTTTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTCTTAGGATTTAATAGGAGGAATTAACCCTGGTAGGCTTTAGT  700

seq1  TAGGGAATTC  710
      ||||||||||
seq2  TAGGGAATTC  710