BAC Information

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BAC

Clone NameB6Ng01-207J10
Chromosome15 (Build37)
Map Location 70,661,164 - 70,781,903
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383050
Downstream geneLOC383051, 1700010C24Rik, LOC100040847, Col22a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207J10.bB6Ng01-207J10.g
ACCGA026694GA026695
length1,129970
definitionB6Ng01-207J10.b B6Ng01-207J10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,661,164 - 70,662,263)(70,780,944 - 70,781,903)
sequence
gaattctgtttttataactcaggcaaaggaaggacataaagcttacctat
catctatttgcaggatacactgtaagatgctaagtagatacacagaggaa
tactttatagaatattttacagtagagaacttgttcagaatgcagacccc
acatctcatcctttaccaatgattagggatcacaaaagcaaggtagaaac
ttagtagacaaggataacaagagcctgaataaccacctggatgaggaatg
catggaaaaaactttgcatttaaacagaaaattgtacattaattttttaa
ggtgacttgatactttcccattgactagactaactcaaaatcaaaatcag
ctcacatttgtgaaagaacattgggaatagaagagaaggaaattccccaa
gatgtgtgagaaccatgtcaaatcaagagggtcaagatgctcaagagtct
tttggtttccaaaaagatatttcttagaacctcaataaagcaggaataat
gtattgccatactttataggggtattgaattttccatttttagagagcct
tccttaggcaatacaaaactttatttgatgatcaagtggtttaaaaagat
acatggatatagaacttagaaaacaaaaagaaaaaacagtcctgagagag
tcctgccaagatgtcattttgctagactgctgcataacgtgagcgaaaag
aatatggtttgtctaaacatatgaagtgaggaaattagataattcagtag
gagcaggaagacttctttgaggataagattggaagctcaagtctcaatga
tacgaagctctaagacagccagggttacaaatcctgaagtttcatgataa
agaccatgttgaccaaaggacttcagttggttatgaccagcccataagga
caagctttcagattgaatctgagaagtagatggggactttgatcacaaat
gatttgattagggacaatttttttgttctccatatcaaataatagtggaa
gatttttgaccatggggaactttacattgaaggcaagttaaggtttttaa
taccaaatattattcaattgtgagtcaatgtgaataaaatgctctaaaaa
ggctcagatatggtttgacttgtttacca

gaattcatatgtagtatttgaatggactttctttggagttaaagttctaa
tgatcagtctcttcacacagaaaccaaattgacttaggctatttgcaggg
tccatttctttgacaaagcacagaacagcagaatgtcctctttggggaga
gtatattccaaacaaaaatttcctagtatgatcatttaaaaaatgagtga
aataaaaagaaagagaataagaaaaaaaggaaaggaggaggctactacta
ccatgactattaagtatggaaaagattctaattatagatataagggagaa
agcaggcagaagaaagagtccaggctgaatatggtcagcagactaaacct
gatcatgagaagagagaggtggaggagagtaagagaggagcaaatgacca
agagaggtagtctggggccaagaggccaagagactggtatagccaatatg
gctgagttatagacggtcaggctggggtaagggaagtggaagcctagccc
ttgatggcaagagatttagggtaaaggtgaggtgagaagcgctgggagga
gccacaaatactgagtgagactcatccctgttttctttgagtccaaacac
aaagtaaatacgagatgagtaagctatgatatttttacagtttcccttga
actgcatgggaatttgacttacatgtgttggtaagtttcatgtgttgcct
gctgtaagtgacagtgtgtgtgtctcattttcatcttgttctctccccct
ctaacttcctcaaccctttcaaattcatgtttgttgaatcaaaattgtcc
ccacaggtccatagggagtggcactattaggaggttgtggccttgtttgg
agaaagagtttcacaggtggtaagcccttttagagttttcataaacttca
agctagaaaccagtgtcagtctctcttcctactgccagaatatggaactc
ttttctcatgttctgccatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_70661164_70662263
seq2: B6Ng01-207J10.b_43_1171

seq1  GAATTCTGTTTTTATAACTCAGGCAAAGGAAGGACATAAAGCTTACCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTTTATAACTCAGGCAAAGGAAGGACATAAAGCTTACCTAT  50

seq1  CATCTATTTGCAGGATACACTGTAAGATGCTAAGTAGATACACAGAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATTTGCAGGATACACTGTAAGATGCTAAGTAGATACACAGAGGAA  100

seq1  TACTTTATAGAATATTTTACAGTAGAGAACTTGTTCAGAATGCAGACCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTATAGAATATTTTACAGTAGAGAACTTGTTCAGAATGCAGACCCC  150

seq1  ACATCTCATCCTTTACCAATGATTAGGGATCACAAAAGCAAGGTAGAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTCATCCTTTACCAATGATTAGGGATCACAAAAGCAAGGTAGAAAC  200

seq1  TTAGTAGACAAGGATAACAAGAGCCTGAATAACCACCTGGATGAGGAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGACAAGGATAACAAGAGCCTGAATAACCACCTGGATGAGGAATG  250

seq1  CATGGAAAAAACTTTGCATTTAAACAGAAAATTGTACATTAATTTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAAAAAACTTTGCATTTAAACAGAAAATTGTACATTAATTTTTTAA  300

seq1  GGTGACTTGATACTTTCCCATTGACTAGACTAACTCAAAATCAAAATCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTTGATACTTTCCCATTGACTAGACTAACTCAAAATCAAAATCAG  350

seq1  CTCACATTTGTGAAAGAACATTGGGAATAGAAGAGAAGGAAATTCCCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATTTGTGAAAGAACATTGGGAATAGAAGAGAAGGAAATTCCCCAA  400

seq1  GATGTGTGAGAACCATGTCAAATCAAGAGGGTCAAGATGCTCAAGAGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGTGAGAACCATGTCAAATCAAGAGGGTCAAGATGCTCAAGAGTCT  450

seq1  TTTGGTTTCCAAAAAGATATTTCTTAGAACCTCAATAAAGCAGGAATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTCCAAAAAGATATTTCTTAGAACCTCAATAAAGCAGGAATAAT  500

seq1  GTATTGCCATACTTTATAGGGGTATTGAATTTTCCATTTTTAGAGAGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGCCATACTTTATAGGGGTATTGAATTTTCCATTTTTAGAGAGCCT  550

seq1  TCCTTAGGCAATACAAAACTTTATTTGATGATCAAGTGGTTTAAAAAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGGCAATACAAAACTTTATTTGATGATCAAGTGGTTTAAAAAGAT  600

seq1  ACATGGATATAGAACTTAGAAAACAAAAAGAAAAAACAGTCCTGAGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGATATAGAACTTAGAAAACAAAAAGAAAAAACAGTCCTGAGAGAG  650

seq1  TCCTGCCAAGATGTCATTTTGCTAGACTGCTGCATAACGTGAGCGAAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCAAGATGTCATTTTGCTAGACTGCTGCATAACGTGAGCGAAAAG  700

seq1  AATATGGTTTGTCTAAACATATGAAGTGAGGAAATTAGATAATTCAGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGTTTGTCTAAACATATGAAGTGAGGAAATTAGATAATTCAGTAG  750

seq1  GAGCAGGAAGACTTCTTTGAGGATAAGATTGGAAGCTCAAGTCTCAATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGAAGACTTCTTTGAGGATAAGATTGGAAGCTCAAGTCTCAATGA  800

seq1  TACGAAGCTCTAAGACAGCCAGGGTTACAAATCCTGAAGTTTCATGATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGAAGCTCTAAGACAGCCAGGGTTACAAATCCTGAAGTTTCATGATAA  850

seq1  AGACCATGTTGACCAAAGGAC-TCAGT--GGTATGACCAGCCCATAAGGA  897
      ||||||||||||||||||||| |||||  | |||||||||||||||||||
seq2  AGACCATGTTGACCAAAGGACTTCAGTTGGTTATGACCAGCCCATAAGGA  900

seq1  C-AGC-TTCAGA-TGAATCTGAGAAGTAGAT-GGGACTTTGATCACAAAT  943
      | ||| |||||| |||||||||||||||||| ||||||||||||||||||
seq2  CAAGCTTTCAGATTGAATCTGAGAAGTAGATGGGGACTTTGATCACAAAT  950

seq1  GA-TTGAT--AGGACAATTTTTT--GTCT-CATATCAAATAATAGTGG-A  986
      || |||||   ||||||||||||   ||| |||||||||||||||||| |
seq2  GATTTGATTAGGGACAATTTTTTTGTTCTCCATATCAAATAATAGTGGAA  1000

seq1  GA-TTTTGA-CAT-GGGAAC-TTACA-TGAA-GCAAGTTAAG--TTTTAA  1028
      || |||||| ||| |||||| ||||| |||| ||||||||||  ||||||
seq2  GATTTTTGACCATGGGGAACTTTACATTGAAGGCAAGTTAAGGTTTTTAA  1050

seq1  TAC--AATATTA-TCAA-TGTGAATCAATGTGAATAAAATGCTCT-AAAA  1073
      |||  ||||||| |||| ||||| ||||||||||||||||||||| ||||
seq2  TACCAAATATTATTCAATTGTGAGTCAATGTGAATAAAATGCTCTAAAAA  1100

seq1  GGCTCAGATATGG-TTGAC-TGTTTACCA  1100
      ||||||||||||| ||||| |||||||||
seq2  GGCTCAGATATGGTTTGACTTGTTTACCA  1129


seq1: chr15_70780944_70781903
seq2: B6Ng01-207J10.g_66_1035 (reverse)

seq1  CATGGCAG-ACATGATGAAAAGAGTTCTATA-TCTGGCAGTAGGAAGAGA  48
      |||||||| |||||| ||||||||||| ||| ||||||||||||||||||
seq2  CATGGCAGAACATGA-GAAAAGAGTTCCATATTCTGGCAGTAGGAAGAGA  49

seq1  GACTGACACTGG-TTCTGGCTTG-AGTTTATGAAACCTC--AAAGG--CT  92
      |||||||||||| |||| ||||| ||||||||||| |||  |||||   |
seq2  GACTGACACTGGTTTCTAGCTTGAAGTTTATGAAAACTCTAAAAGGGCTT  99

seq1  ACCACCTGTGAAACTCTTTCTCC-AACAAGGCCAC-ACCTCCTAATAGTG  140
      ||||||||||||||||||||||| ||||||||||| ||||||||||||||
seq2  ACCACCTGTGAAACTCTTTCTCCAAACAAGGCCACAACCTCCTAATAGTG  149

seq1  CCACTCCCTATGGACCTGTGGGGACAATTTTGATTCAACAAACATGAATT  190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCTATGGACCTGTGGGGACAATTTTGATTCAACAAACATGAATT  199

seq1  TGAAAGGGTTGAGGAAGTTAGAGGGGGAGAGAACAAGATGAAAATGAGAC  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGGTTGAGGAAGTTAGAGGGGGAGAGAACAAGATGAAAATGAGAC  249

seq1  ACACACACTGTCACTTACAGCAGGC-ACACATGAAACTTACCAACACATG  289
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACACACACTGTCACTTACAGCAGGCAACACATGAAACTTACCAACACATG  299

seq1  TAAGTCAAATTCCCATGCAGTTCAAGGGAAACTGTAAAAATATCATAGCT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCAAATTCCCATGCAGTTCAAGGGAAACTGTAAAAATATCATAGCT  349

seq1  TACTCATCTCGTATTTACTTTGTGTTTGGACTCAAAGAAAACAGGGATGA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATCTCGTATTTACTTTGTGTTTGGACTCAAAGAAAACAGGGATGA  399

seq1  GTCTCACTCAGTATTTGTGGCTCCTCCCAGCGCTTCTCACCTCACCTTTA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACTCAGTATTTGTGGCTCCTCCCAGCGCTTCTCACCTCACCTTTA  449

seq1  CCCTAAATCTCTTGCCATCAAGGGCTAGGCTTCCACTTCCCTTACCCCAG  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAATCTCTTGCCATCAAGGGCTAGGCTTCCACTTCCCTTACCCCAG  499

seq1  CCTGACCGTCTATAACTCAGCCATATTGGCTATACCAGTCTCTTGGCCTC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCGTCTATAACTCAGCCATATTGGCTATACCAGTCTCTTGGCCTC  549

seq1  TTGGCCCCAGACTACCTCTCTTGGTCATTTGCTCCTCTCTTACTCTCCTC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCCCAGACTACCTCTCTTGGTCATTTGCTCCTCTCTTACTCTCCTC  599

seq1  CACCTCTCTCTTCTCATGATCAGGTTTAGTCTGCTGACCATATTCAGCCT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTCTCTTCTCATGATCAGGTTTAGTCTGCTGACCATATTCAGCCT  649

seq1  GGACTCTTTCTTCTGCCTGCTTTCTCCCTTATATCTATAATTAGAATCTT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTTTCTTCTGCCTGCTTTCTCCCTTATATCTATAATTAGAATCTT  699

seq1  TTCCATACTTAATAGTCATGGTAGTAGTAGCCTCCTCCTTTCCTTTTTTT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATACTTAATAGTCATGGTAGTAGTAGCCTCCTCCTTTCCTTTTTTT  749

seq1  CTTATTCTCTTTCTTTTTATTTCACTCATTTTTTAAATGATCATACTAGG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCTCTTTCTTTTTATTTCACTCATTTTTTAAATGATCATACTAGG  799

seq1  AAATTTTTGTTTGGAATATACTCTCCCCAAAGAGGACATTCTGCTGTTCT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTGTTTGGAATATACTCTCCCCAAAGAGGACATTCTGCTGTTCT  849

seq1  GTGCTTTGTCAAAGAAATGGACCCTGCAAATAGCCTAAGTCAATTTGGTT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTGTCAAAGAAATGGACCCTGCAAATAGCCTAAGTCAATTTGGTT  899

seq1  TCTGTGTGAAGAGACTGATCATTAGAACTTTAACTCCAAAGAAAGTCCAT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGAAGAGACTGATCATTAGAACTTTAACTCCAAAGAAAGTCCAT  949

seq1  TCAAATACTACATATGAATTC  960
      |||||||||||||||||||||
seq2  TCAAATACTACATATGAATTC  970


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