BAC Information

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BAC

Clone NameB6Ng01-212H06
Chromosome15 (Build37)
Map Location 91,489,482 - 91,490,647
singlet/doubletsinglet
Overlap genenone
Upstream geneCpne8, LOC100042462, LOC100042471, EG667682, Tcea1-ps1, Spn-ps, Kif21a, EG635871, Abcd2, LOC545126, Slc2a13
Downstream geneLrrk2, Muc19, Smgc, LOC100042529, Cntn1, Pdzrn4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212H06.bB6Ng01-212H06.g
ACCGA030244GA030245
length1,183915
definitionB6Ng01-212H06.b B6Ng01-212H06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
caaactcctttgcaaccaagctggtagtctgatcagttagaggttggacc
cttctctggaaccactgagtcagaggtgcagctgaggtgcaggaaataga
ggactcagttgtcaatctggtctaagggtggggctgtcctgtcaatctgt
gctccaagttgtgtgggattcaagattctgagcagcttggcagaagcccc
ctcccagagcccatcccaccaacacctgcaaagatttgcttcctttgacc
aacactacatgcctccctcagtggagcatcttagacccacttctgtgtga
aacaagaaaggggaaacttgctttgacttttattgtatgtttatgtttaa
tgtattttgactctggaaattacccagattaaaaatagacctagtggtct
ctgtaatctgagaacctgggaggttgaggcaggaatatgactacaaactc
aagtagagggcagccagaagtgcatagaaataaacctagttctccaatcc
aacacacacacacacacacacacacacacacacacacacacacacacaca
ctattcaaccagattgttttactagatgcaacagaagacatacaacacac
tcagaactatacagctcagagctctatcaacttggacccttgcctgccag
gagatttactcaacagtaggaacaactaactcctccgaactaaacctatc
aacatttgaaattttaaatgacttgagcataactcaatagcagaggcatc
tgtcttgctggtagctgagatccaggttgcaaggggtaagaggattccaa
ggagtgttttgcctgttcagtgtagttgcgtggaaaggctgttttatcca
ggagtactgagagccacagtgtgaagcagagtttgagcctggtgggagga
gctagaagggttttagggttgatagggtcatctgaaaccctgctttactt
tcttgagtggcatgaagtgttggtggagcacccttgtgaaaaaagacaaa
ggtggtcttacagtaacttaatgtcttgttaagcagttagtggggggcat
gccagtgaatgctagccattcggaaaggctgcggcaagaggtgatgttca
ggcctgcatgagcttacagtagtggagtcccaggcaagcctggaaaagtt
ggaagccttggtcttcaggacacccgaactaca
gaattcatggatcttggaggagaacttacaactgacacattactaaacca
gcactgttcctaactatattctaaacatctgtccttatactatcaggtaa
gtatagtcttcacccaccatcaaggaaaccaacctctcttggtaacagat
gaaaaccatcacagacaaatcacaatcacccaaaatgcagaactgtggat
tctcatcccaacggatacatctacaacccagttcctttctctgaggctca
gggattattgctgaaggtggagtaggaaaatggtaagagcctgaggaaca
gggagttggctgtgagattgtatctcctgggaatgtcagaagttacaaag
tatcaccgacttgacctccacaacctgcgttgcagaaggacggcaccagc
agacatgctaatgtggatggagaaagctcaagaagcgaagacgcaatcct
aagcaaaaaactacacacaggcaactcagcaatgttgatgagcagtcttc
cctaggtaagagactccactgagttatttaatattaaatgatcaaatcaa
ctatgaaaacatatgtacaagtaatattatatagactgagcaggttgtat
ttatgtatttagtaatgtatacatgcacacatttgtaagaacaatttatg
gaaaaatgaggtcacaaatttgaaagagagcatgcaggggtatatggaaa
catttggagggagaaaagagaagggagaagtgatgtgactatataataat
ctcaaaacataaaaacaatttcaaaaaatactcatggctccagctgcata
tgtagctgaggatggccttgtcgggcatcaatgggaggagagggcttgat
cctgtgaaggctcgatgccccagtgcagggactgctagggcagtgaggtg
ggagtgggtaggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_91489482_91490647
seq2: B6Ng01-212H06.b_53_1235 (reverse)

seq1  TGTTGTTC-GGTGTCCTG-AGACAAGCTCTCACATCT----CAGGCTGGC  44
      ||| |||| ||||||||| |||| |   ||  || ||    |||||| ||
seq2  TGTAGTTCGGGTGTCCTGAAGACCAAGGCTTCCAACTTTTCCAGGCTTGC  50

seq1  CTGGAACT-CACTACTGT-AGCTCATGCAGCCCTTGAACCTTCACCTTCC  92
      |||| ||| ||||||||| ||||||||||| || |||| | ||||| || 
seq2  CTGGGACTCCACTACTGTAAGCTCATGCAGGCC-TGAA-CATCACC-TCT  97

seq1  TGCCGCAGCC-TTCCG-ATGGCTAGCA-TCACTGGCATG--CCCCACT-A  136
      |||||||||| ||||| |||||||||| |||||||||||  ||||||| |
seq2  TGCCGCAGCCTTTCCGAATGGCTAGCATTCACTGGCATGCCCCCCACTAA  147

seq1  CTGCTTA--CAGACATAAAGTTACTGTAAAGACCACCTTTGTC-TGTATC  183
      |||||||   |||||| |||||||||| ||||||||||||||| | | ||
seq2  CTGCTTAACAAGACATTAAGTTACTGT-AAGACCACCTTTGTCTTTTTTC  196

seq1  ACAAGGGTGCTCCACC-ACACTTCATGCCACTCAAGAAAGTAAAGCAGGG  232
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACAAGGGTGCTCCACCAACACTTCATGCCACTCAAGAAAGTAAAGCAGGG  246

seq1  TTTCAGATGA-CCTATCAACCCTAAAA-CCTTCTAGCTCCT-CCACCAGG  279
      |||||||||| |||||||||||||||| ||||||||||||| ||||||||
seq2  TTTCAGATGACCCTATCAACCCTAAAACCCTTCTAGCTCCTCCCACCAGG  296

seq1  CTCAAACTCTGCTTCACACTGTGGCTCTCAGTACTCCTGGATAAAACAGC  329
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACTCTGCTTCACACTGTGGCTCTCAGTACTCCTGGATAAAACAGC  346

seq1  CTTTCCACGCAACTACACTGAACAGGCAAAACACTCCTTGGAATCCTCTT  379
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCACGCAACTACACTGAACAGGCAAAACACTCCTTGGAATCCTCTT  396

seq1  ACCCCTTGCAACCTGGATCTCAGCTACCAGCAAGACAGATGCCTCTGCTA  429
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTGCAACCTGGATCTCAGCTACCAGCAAGACAGATGCCTCTGCTA  446

seq1  TTGAGTTATGCTCAAGTCATTTAAAATTTCAAATGTTGATAGGTTTAGTT  479
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTATGCTCAAGTCATTTAAAATTTCAAATGTTGATAGGTTTAGTT  496

seq1  CGGAGGAGTTAGTTGTTCCTACTGTTGAGTAAATCTCCTGGCAGGCAAGG  529
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGAGTTAGTTGTTCCTACTGTTGAGTAAATCTCCTGGCAGGCAAGG  546

seq1  GTCCAAGTTGATAGAGCTCTGAGCTGTATAGTTCTGAGTGTGTTGTATGT  579
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAGTTGATAGAGCTCTGAGCTGTATAGTTCTGAGTGTGTTGTATGT  596

seq1  CTTCTGTTGCATCTAGTAAAACAATCTGGTTGAATAGTGTGTGTGTGTGT  629
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTTGCATCTAGTAAAACAATCTGGTTGAATAGTGTGTGTGTGTGT  646

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGATTGGAGAACT  679
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGATTGGAGAACT  696

seq1  AGGTTTATTTCTATGCACTTCTGGCTGCCCTCTACTTGAGTTTGTAGTCA  729
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTATTTCTATGCACTTCTGGCTGCCCTCTACTTGAGTTTGTAGTCA  746

seq1  TATTCCTGCCTCAACCTCCCAGGTTCTCAGATTACAGAGACCACTAGGTC  779
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTGCCTCAACCTCCCAGGTTCTCAGATTACAGAGACCACTAGGTC  796

seq1  TATTTTTAATCTGGGTAATTTCCAGAGTCAAAATACATTAAACATAAACA  829
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAATCTGGGTAATTTCCAGAGTCAAAATACATTAAACATAAACA  846

seq1  TACAATAAAAGTCAAAGCAAGTTTCCCCTTTCTTGTTTCACACAGAAGTG  879
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATAAAAGTCAAAGCAAGTTTCCCCTTTCTTGTTTCACACAGAAGTG  896

seq1  GGTCTAAGATGCTCCACTGAGGGAGGCATGTAGTGTTGGTCAAAGGAAGC  929
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAAGATGCTCCACTGAGGGAGGCATGTAGTGTTGGTCAAAGGAAGC  946

seq1  AAATCTTTGCAGGTGTTGGTGGGATGGGCTCTGGGAGGGGGCTTCTGCCA  979
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTGCAGGTGTTGGTGGGATGGGCTCTGGGAGGGGGCTTCTGCCA  996

seq1  AGCTGCTCAGAATCTTGAATCCCACACAACTTGGAGCACAGATTGACAGG  1029
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTCAGAATCTTGAATCCCACACAACTTGGAGCACAGATTGACAGG  1046

seq1  ACAGCCCCACCCTTAGACCAGATTGACAACTGAGTCCTCTATTTCCTGCA  1079
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCCACCCTTAGACCAGATTGACAACTGAGTCCTCTATTTCCTGCA  1096

seq1  CCTCAGCTGCACCTCTGACTCAGTGGTTCCAGAGAAGGGTCCAACCTCTA  1129
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCTGCACCTCTGACTCAGTGGTTCCAGAGAAGGGTCCAACCTCTA  1146

seq1  ACTGATCAGACTACCAGCTTGGTTGCAAAGGAGTTTG  1166
      |||||||||||||||||||||||||||||||||||||
seq2  ACTGATCAGACTACCAGCTTGGTTGCAAAGGAGTTTG  1183