BAC Information

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BAC

Clone NameB6Ng01-215E22
Chromosome15 (Build37)
Map Location 96,254,081 - 96,364,786
singlet/doubletdoublet
Overlap geneSfrs2ip
Upstream geneNell2, Dbx2, LOC100042684, LOC667849, EG629300, LOC667864, Tmem16f, LOC100043329, D030018L15Rik, LOC100043335, EG667869, LOC667874, LOC667894, Arid2
Downstream geneSlc38a1, Slc38a2, LOC667941, LOC546651, Slc38a4, Amigo2, BC038822, LOC100043354
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215E22.bB6Ng01-215E22.g
ACCGA032314GA032315
length1,1881,182
definitionB6Ng01-215E22.b B6Ng01-215E22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,363,616 - 96,364,786)(96,254,081 - 96,255,268)
sequence
gaattctgctcgctctggtcaaccccaccccgctcactcagtccctgctt
gctctggcccaaagatgaatttattattactaataagtacactgttgcta
tcttcagacacaccagaagagggcatcagatctcattacagatggttgtg
agccaccatgtggttgctggggattgaactcaggacctctgcaagagcag
tcagtgctcttaaccgctgagccatctccccagccccctagaatttattt
tatgtatgtgagtacactgtagctatcttcagatgagtctaagaatctaa
atcccaggttaaaattgccaaaggggtgaaagccatttaagaagagaggc
acatttactaaagtgcaaggactgactcgttctgtgggcaataactcctt
ggtaaagagacgtctgttgatgctagactgtcagggagacaggaattcac
actgactgcgcagtgaactcccactgttcctgtttcctcctatgtgatgt
gctggtgaaatgaatgggaagataattgtcttcagatctcttttctctaa
ataacatgtctatattgaaatgtatagttcctgttctcctcagcaccctt
gcagtttgaaagttattatattgcctgactttcagacaataagcaaccgg
gtgtgtatagtgacatgcttattatttaggggttcatatttcctttgtat
ctggagaagacaagctgatgtgtgtacattttccttgcctctggtatctt
agtattatcctcccaaatgaagatacagagaatgtcactgtggggagaat
agttttaaactccagctcctggcctgtttctctcatgactttgccaccgt
gcattggtgtgactgaatttttacattcaccattagactagactctttct
tggaacaggaatgtttttatggttgagcctctcttaacatggccctagtt
aatcaattcacaaaggaaaagaagctgagtttttaaccactgagaggaat
tttgaccctcacaaatgggggcaatgcagaatgccagccacttttaaata
aaaatggtcaacggattgctattcttcctcgcctcttgctagccaattgt
agatgaaccacctgtacgaaagcctggtgatcgcccctgctgctgtgtat
tttaaatgccacaacatgagccatcatgttagactact
gaattctcagaaagtttggagaaagcccgagttatggcgtgaatagtgct
agtttccacaagcatcccagggaaacactttctaagtaagcacaccctgc
cctaagaacttttacaaaacaaaactgaatttaaatgcatactacaaaga
attgcttagaattctgaatgaacatctgcaggatgttgttcgcctttgag
agacctagatacagaggctaggttggtctcaaaattccatcatgtactag
ttctgatgaggactgacagaaagccatgaacgctgggcagagtgggcact
tgatccaagagttcttaagacaaccttcaattcagacattaactccaact
ggtgtgagaaattcttactcaggacaatcatgctctactttagtccaaaa
gaagaaaataaaaatgggtggcattatcttgacccaaaatagatttactt
cagcttttcatgaagggaatcagatgtaattgtttcttgagtactcagac
aagctctaaaaatatcacaattctactttgttgactcaattaagtatgtg
tgattttaaaacatcagtattttaatcacacaaatatatacccaatatct
acctgctgatcactatgtatccagagtacaggatcagctctgacacagtt
gatttaataggtggcacacttatgatttcacacttatgtttccccagcat
atatcaaaattatgctcaacaacctacttaagcaaacattgtagaacacc
gaataactcacaaaagttccctctttgctagtactagttttgttttctaa
ggaacaatagcaaaatgagttctctcactttttattgagccccagtttaa
atctctaccaaaagtcaattatgactaaaacacattgtgtaacaactaca
aagcaaggacagtgagcactaaccaggaagctctatgggtgcgaggtccc
cagctgtggctgccacatgaaaacacactggacatctcattttttaatac
acgaatctgtacactgaattggatcttttgaacctaaaaatataaagttg
ttaatggaaacagaaacgaaatattaagattgtatgcacttaagccttaa
tcactaattaccaattcctttattcctagtacttaatgataggaaaaggt
ttttcgttaatttcaacaaacccttatattgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_96363616_96364786
seq2: B6Ng01-215E22.b_46_1233 (reverse)

seq1  AGTAGTCTAAACCAACGATGCTTCATGTTGTGGCATT--AAATACCAACA  48
      ||||||||||    | ||||  |||||||||||||||  ||||||  |||
seq2  AGTAGTCTAA---CATGATGGCTCATGTTGTGGCATTTAAAATAC--ACA  45

seq1  GCACCA-GGGCGATCCACAG--CTTCGTACCAGT-GTTCATCTACCATTG  94
      ||| || ||||||||  |||   |||||||  || |||||||||| ||||
seq2  GCAGCAGGGGCGATCACCAGGCTTTCGTACAGGTGGTTCATCTACAATTG  95

seq1  CCTAGCAAGA-GCGAGG-AGGATAGCAA-CCG-TGA-CATTTTTATT--A  137
       ||||||||| |||||| || ||||||| ||| ||| ||||||||||  |
seq2  GCTAGCAAGAGGCGAGGAAGAATAGCAATCCGTTGACCATTTTTATTTAA  145

seq1  AAGTGGCTGGCA-TCTGCATTG-CCCCAATTGTGA-GGTCAAAATTCCTC  184
      |||||||||||| ||||||||| ||||| |||||| ||||||||||||||
seq2  AAGTGGCTGGCATTCTGCATTGCCCCCATTTGTGAGGGTCAAAATTCCTC  195

seq1  TCAGT-GTTTAAAACTCAGC-TCTTTTCCTTTGTGAATTGATTAACTA-G  231
      ||||| ||| |||||||||| ||||||||||||||||||||||||||| |
seq2  TCAGTGGTTAAAAACTCAGCTTCTTTTCCTTTGTGAATTGATTAACTAGG  245

seq1  GCCATGTT-AGAGAGGCTCAACCATAAAAACATTCCTGTTCCAAG-AAGA  279
      |||||||| |||||||||||||||||||||||||||||||||||| ||||
seq2  GCCATGTTAAGAGAGGCTCAACCATAAAAACATTCCTGTTCCAAGAAAGA  295

seq1  GTCTAGTCTAATGGTGAATGTAAAAATTCAGTCACACCAATGCACGGTGG  329
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGTCTAATGGTGAATGTAAAAATTCAGTCACACCAATGCACGGTGG  345

seq1  CAAAGTCATGAGAGAAACA-GCCAGGAGCTGGAGTTTAAAACTATTCTCC  378
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAAAGTCATGAGAGAAACAGGCCAGGAGCTGGAGTTTAAAACTATTCTCC  395

seq1  CCACAGTGACATTCTCTGTATCTTCATTTGGGAGGATAATACTAAGATAC  428
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTGACATTCTCTGTATCTTCATTTGGGAGGATAATACTAAGATAC  445

seq1  CAGAGGCAAGGAAAATGTACACACATCAGCTTGTCTTCTCCAGATACAAA  478
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAAGGAAAATGTACACACATCAGCTTGTCTTCTCCAGATACAAA  495

seq1  GGAAATATGAACCCCTAAATAATAAGCATGTCACTATACACACCCGGTTG  528
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATATGAACCCCTAAATAATAAGCATGTCACTATACACACCCGGTTG  545

seq1  CTTATTGTCTGAAAGTCAGGCAATATAATAACTTTCAAACTGCAAGGGTG  578
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGTCTGAAAGTCAGGCAATATAATAACTTTCAAACTGCAAGGGTG  595

seq1  CTGAGGAGAACAGGAACTATACATTTCAATATAGACATGTTATTTAGAGA  628
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAGAACAGGAACTATACATTTCAATATAGACATGTTATTTAGAGA  645

seq1  AAAGAGATCTGAAGACAATTATCTTCCCATTCATTTCACCAGCACATCAC  678
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGATCTGAAGACAATTATCTTCCCATTCATTTCACCAGCACATCAC  695

seq1  ATAGGAGGAAACAGGAACAGTGGGAGTTCACTGCGCAGTCAGTGTGAATT  728
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGGAAACAGGAACAGTGGGAGTTCACTGCGCAGTCAGTGTGAATT  745

seq1  CCTGTCTCCCTGACAGTCTAGCATCAACAGACGTCTCTTTACCAAGGAGT  778
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTCCCTGACAGTCTAGCATCAACAGACGTCTCTTTACCAAGGAGT  795

seq1  TATTGCCCACAGAACGAGTCAGTCCTTGCACTTTAGTAAATGTGCCTCTC  828
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCCCACAGAACGAGTCAGTCCTTGCACTTTAGTAAATGTGCCTCTC  845

seq1  TTCTTAAATGGCTTTCACCCCTTTGGCAATTTTAACCTGGGATTTAGATT  878
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAATGGCTTTCACCCCTTTGGCAATTTTAACCTGGGATTTAGATT  895

seq1  CTTAGACTCATCTGAAGATAGCTACAGTGTACTCACATACATAAAATAAA  928
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGACTCATCTGAAGATAGCTACAGTGTACTCACATACATAAAATAAA  945

seq1  TTCTAGGGGGCTGGGGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT  978
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGGGGCTGGGGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCT  995

seq1  TGCAGAGGTCCTGAGTTCAATCCCCAGCAACCACATGGTGGCTCACAACC  1028
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGGTCCTGAGTTCAATCCCCAGCAACCACATGGTGGCTCACAACC  1045

seq1  ATCTGTAATGAGATCTGATGCCCTCTTCTGGTGTGTCTGAAGATAGCAAC  1078
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAATGAGATCTGATGCCCTCTTCTGGTGTGTCTGAAGATAGCAAC  1095

seq1  AGTGTACTTATTAGTAATAATAAATTCATCTTTGGGCCAGAGCAAGCAGG  1128
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACTTATTAGTAATAATAAATTCATCTTTGGGCCAGAGCAAGCAGG  1145

seq1  GACTGAGTGAGCGGGGTGGGGTTGACCAGAGCGAGCAGAATTC  1171
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGTGAGCGGGGTGGGGTTGACCAGAGCGAGCAGAATTC  1188

seq1: chr15_96254081_96255268
seq2: B6Ng01-215E22.g_69_1250

seq1  GAATTCTCAGAAAGTTTGGAGAAAGCCCGAGTTATGGCGTGAATAGTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGAAAGTTTGGAGAAAGCCCGAGTTATGGCGTGAATAGTGCT  50

seq1  AGTTTCCACAAGCATCCCAGGGAAACACTTTCTAAGTAAGCACACCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCACAAGCATCCCAGGGAAACACTTTCTAAGTAAGCACACCCTGC  100

seq1  CCTAAGAACTTTTACAAAACAAAACTGAATTTAAATGCATACTACAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGAACTTTTACAAAACAAAACTGAATTTAAATGCATACTACAAAGA  150

seq1  ATTGCTTAGAATTCTGAATGAACATCTGCAGGATGTTGTTCGCCTTTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTAGAATTCTGAATGAACATCTGCAGGATGTTGTTCGCCTTTGAG  200

seq1  AGACCTAGATACAGAGGCTAGGTTGGTCTCAAAATTCCATCATGTACTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTAGATACAGAGGCTAGGTTGGTCTCAAAATTCCATCATGTACTAG  250

seq1  TTCTGATGAGGACTGACAGAAAGCCATGAACGCTGGGCAGAGTGGGCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATGAGGACTGACAGAAAGCCATGAACGCTGGGCAGAGTGGGCACT  300

seq1  TGATCCAAGAGTTCTTAAGACAACCTTCAATTCAGACATTAACTCCAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCAAGAGTTCTTAAGACAACCTTCAATTCAGACATTAACTCCAACT  350

seq1  GGTGTGAGAAATTCTTACTCAGGACAATCATGCTCTACTTTAGTCCAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGAGAAATTCTTACTCAGGACAATCATGCTCTACTTTAGTCCAAAA  400

seq1  GAAGAAAATAAAAATGGGTGGCATTATCTTGACCCAAAATAGATTTACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAATAAAAATGGGTGGCATTATCTTGACCCAAAATAGATTTACTT  450

seq1  CAGCTTTTCATGAAGGGAATCAGATGTAATTGTTTCTTGAGTACTCAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTTCATGAAGGGAATCAGATGTAATTGTTTCTTGAGTACTCAGAC  500

seq1  AAGCTCTAAAAATATCACAATTCTACTTTGTTGACTCAATTAAGTATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTAAAAATATCACAATTCTACTTTGTTGACTCAATTAAGTATGTG  550

seq1  TGATTTTAAAACATCAGTATTTTAATCACACAAATATATACCCAATATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTAAAACATCAGTATTTTAATCACACAAATATATACCCAATATCT  600

seq1  ACCTGCTGATCACTATGTATCCAGAGTACAGGATCAGCTCTGACACAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCTGATCACTATGTATCCAGAGTACAGGATCAGCTCTGACACAGTT  650

seq1  GATTTAATAGGTGGCACACTTATGATTTCACACTTATGTTTCCCCAGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAATAGGTGGCACACTTATGATTTCACACTTATGTTTCCCCAGCAT  700

seq1  ATATCAAAATTATGCTCAACAACCTACTTAAGCAAACATTGTAGAACACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAAAATTATGCTCAACAACCTACTTAAGCAAACATTGTAGAACACC  750

seq1  GAATAACTCACAAAAGTTCCCTCTTTGCTAGTACTAG-TTTGTTTTCTAA  799
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAATAACTCACAAAAGTTCCCTCTTTGCTAGTACTAGTTTTGTTTTCTAA  800

seq1  GGAACAATAGCAAAATGAGTTCTCTCAC-TTTTATTGAG-CCCAGTTTAA  847
      |||||||||||||||||||||||||||| |||||||||| ||||||||||
seq2  GGAACAATAGCAAAATGAGTTCTCTCACTTTTTATTGAGCCCCAGTTTAA  850

seq1  ATCTCTACCAAAAGTCAATTATGACTAAAACACAATGTGTAACAACTACA  897
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATCTCTACCAAAAGTCAATTATGACTAAAACACATTGTGTAACAACTACA  900

seq1  AAGCAAGGACAGTGAGCACTAACCAGGAAGCTCTATGGGTGCGAGGTCCC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGGACAGTGAGCACTAACCAGGAAGCTCTATGGGTGCGAGGTCCC  950

seq1  CAGCTGTGGCTGCCACATGAAAACACACTGGACATCTCA-TTTCTAATAC  996
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  CAGCTGTGGCTGCCACATGAAAACACACTGGACATCTCATTTTTTAATAC  1000

seq1  ACGAATCTGTACACTG-ATTTGATC-TTTGAACCTAAAAATATAAAAAGT  1044
      |||||||||||||||| ||| |||| |||||||||||||||||  |||||
seq2  ACGAATCTGTACACTGAATTGGATCTTTTGAACCTAAAAATAT--AAAGT  1048

seq1  TGTTAATGAAACCAGAAAACGAAAATATTTAAAAGGAATTGTATGCACCT  1094
      |||||||| || ||| ||||| |||||||   |||  |||||||||| ||
seq2  TGTTAATGGAAACAG-AAACG-AAATATT---AAG--ATTGTATGCA-CT  1090

seq1  TAAGCACTAAATCACTAAATAACAAAATCACTAAATCACTAAATAACTAA  1144
      ||||| || ||||||||| || |  |||  ||  ||  || | ||  |||
seq2  TAAGC-CTTAATCACTAATTACC--AATTCCTTTATTCCT-AGTACTTAA  1136

seq1  TAATAAGAAAAAAGTTTTCCTTTATTTCAACAAA-CCTTAT-TTGT  1188
      | ||| |||||   ||||| || ||||||||||| |||||| ||||
seq2  TGATAGGAAAAGGTTTTTCGTTAATTTCAACAAACCCTTATATTGT  1182