BAC Information

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BAC

Clone NameB6Ng01-217N11
Chromosome15 (Build37)
Map Location 45,804,710 - 45,805,886
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnv1, LOC100039389
Downstream geneEG432951, LOC100039438
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217N11.bB6Ng01-217N11.g
ACCGA034132GA034133
length1,1831,092
definitionB6Ng01-217N11.b B6Ng01-217N11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcatgtctaaagggagcagagtacatgcataagccttaatct
ataccaactcaagatgaagaaataatcatggttcagtggcaaccatttga
tgtctttgaatttaatttcattaagattataataaaggagctggagagaa
gactctgcaaggaaaaacactggctactcttccaaaggaccattgtttaa
ttctcagcactcaggtggcagctcacaactgtttataatggagttaaaat
ctgtcatcttaatacagacttatatccaggcagaaaaccaaggtgcataa
gattaaaataagttaataagtataaaaccttcaaagactgttataatatg
actacataatatccttctttctgttcctaaatcccaaacttccaatacaa
ccaactcttgttatctttcaaattcatttggtattggtagccaactggta
tgtccttcctggaggaagattatttttctttatctcaatatttattagtt
gtctttagttctttctgtagggttgagcttctttggctcctctgtatccc
aaaccatgttaaggtgtttatttttattgttcttgtttagctcatattta
agtagttatgttagtaagactttataggtgtaggttttgacgtttctgga
gataaaatttattttatgggagcatggccatgacctgaggaccttcctgt
aactaaaaatctcttcctagggagagaaataaagcagtatctagtctttt
ccccaagggattaaagggaaactgagacacaaatccaccaaagtacattc
taaaaatcaatgaatatattgagtttctttaaaagtttagggtagtatac
aaggattcctttctacccaactgcacctgaaaagccttacaaaagtggat
taaagaatatttcagtatccatatacttggatccattttctacagatatt
taagcaagaatcaaaagaatatgttacactacactagagcctctattagt
ggatttcaaacccatcaccatgccagctggagatatctttttggcacagg
taacactatggaattcaaatggcatttatttacctcaaggatacctcaca
aatttctgcttaagcacattatctaataatataacctggtgtctaaatac
tgtggaccttagagaacaaatctcttagcatgg

gaattcctggcctttccaagacttttctcatgaatgggtgttggattttg
tcaaatgcttgctgagcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattactttgatggatttccatatattaaacc
atccctgcaccccagaaatgaagcctacttgatcatgatggatgatcatt
ttgatgtattcttgaatttggtttgtgagaaatttattgagtatttttgc
tttaatattcataattggtctgaagttctccgtctttgttgggacttttt
gtggtttaggtatcagaataattgtggcttcatagaatgaattgggtaga
gtaccttctgtatctattttgtggaatagtttgtgcagaactagaattag
gtcttccttgaatgtctgatagaactctgcactaaacccatctggttgtg
ggctttatttgggaaatttttaatgactgattctatttctttaggggata
agggactgtttaggtcattaatatgatccggatttaacttcagtaaatgg
tatctgctgtcctgtccagcaggacctagtttttctgtgggtcgaggaag
atctgggcctacaagagaagcaggcagagaaaggggagtgacaccaagca
gagaattgttaaggtctgtttaatgacggctaggaccctgattataagta
cacagtgagagaaaatagggaggggtcgagggggcataataaatacagag
aaagggatggacatctgggtcaatgctgattacaggcttctcgtagctta
tctgggaatgttggccccctaacagtcccaggtggcctcaaacaatatgc
agtttatcttggagtgccataaacagtcccaggcaccaaacagagacatg
gaggaaggaggtgaagctgccttatctaaagcagttctaggcgccaagtg
aagaatggagttgaagctggcaatctcaaacaccagtggaagcaatgatg
gaaggggttgaccataatttcctttcaaagggtagcttgattctttatgg
ttagaaagtacactgtccgtactcaagattctacagcagttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_45804710_45805886
seq2: B6Ng01-217N11.b_48_1230 (reverse)

seq1  CCATGCT-AGAGATTTGGTCTTTAGTGT-CACAGTATTTAGACA-CAG--  45
      ||||||| ||||||||| ||| ||  || ||||||||||||||| |||  
seq2  CCATGCTAAGAGATTTGTTCTCTAAGGTCCACAGTATTTAGACACCAGGT  50

seq1  TATATTATTAAGATATGGTTGGCTT-AGCAGAAATTTGTGA-GTATCCTT  93
      ||||||||| |||||  ||  |||| ||||||||||||||| |||||| |
seq2  TATATTATT-AGATAATGT--GCTTAAGCAGAAATTTGTGAGGTATCC-T  96

seq1  TGAGGTAAATAAATGCCATTTTGAATTCAATAGTGTTACTTGTGC--AAA  141
      |||||||||||||||||| ||||||||| |||||||||| |||||  |||
seq2  TGAGGTAAATAAATGCCA-TTTGAATTCCATAGTGTTACCTGTGCCAAAA  145

seq1  AGATTATCT-CAGCTGGCATGGTTGATGGGTTTGAAAT-CACTAATAGAG  189
      ||| ||||| |||||||||||| ||||||||||||||| |||||||||||
seq2  AGA-TATCTCCAGCTGGCATGG-TGATGGGTTTGAAATCCACTAATAGAG  193

seq1  GCTCTAGTGTAGTGTAACATATTCTTTTGATTCTTGCTTAAATATCTGTA  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAGTGTAGTGTAACATATTCTTTTGATTCTTGCTTAAATATCTGTA  243

seq1  GAAAATGGATCCAAGTATATGGATACTGAAATA-TCCTTAATCCACTTTT  288
      ||||||||||||||||||||||||||||||||| || |||||||||||||
seq2  GAAAATGGATCCAAGTATATGGATACTGAAATATTCTTTAATCCACTTTT  293

seq1  GTAAGGCTTTTCAGGTGCAGTTGGGTAGAAAGGAATCCTTGTATACTA-C  337
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTAAGGCTTTTCAGGTGCAGTTGGGTAGAAAGGAATCCTTGTATACTACC  343

seq1  CTAAACTTTTAAAGAAACTCAATATATTCATTGATTTTTAGAATGTACTT  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACTTTTAAAGAAACTCAATATATTCATTGATTTTTAGAATGTACTT  393

seq1  TGGTGGATTTGTGTCTCAGTTTCCCTTTAATCCCTTGGGGAAAAGACTAG  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGATTTGTGTCTCAGTTTCCCTTTAATCCCTTGGGGAAAAGACTAG  443

seq1  ATACTGCTTTATTTCTCTCCCTAGGAAGAGATTTTTAGTTACAGGAAGGT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGCTTTATTTCTCTCCCTAGGAAGAGATTTTTAGTTACAGGAAGGT  493

seq1  CCTCAGGTCATGGCCATGCTCCCATAAAATAAATTTTATCTCCAGAAACG  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGTCATGGCCATGCTCCCATAAAATAAATTTTATCTCCAGAAACG  543

seq1  TCAAAACCTACACCTATAAAGTCTTACTAACATAACTACTTAAATATGAG  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACCTACACCTATAAAGTCTTACTAACATAACTACTTAAATATGAG  593

seq1  CTAAACAAGAACAATAAAAATAAACACCTTAACATGGTTTGGGATACAGA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAAGAACAATAAAAATAAACACCTTAACATGGTTTGGGATACAGA  643

seq1  GGAGCCAAAGAAGCTCAACCCTACAGAAAGAACTAAAGACAACTAATAAA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCAAAGAAGCTCAACCCTACAGAAAGAACTAAAGACAACTAATAAA  693

seq1  TATTGAGATAAAGAAAAATAATCTTCCTCCAGGAAGGACATACCAGTTGG  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAGATAAAGAAAAATAATCTTCCTCCAGGAAGGACATACCAGTTGG  743

seq1  CTACCAATACCAAATGAATTTGAAAGATAACAAGAGTTGGTTGTATTGGA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAATACCAAATGAATTTGAAAGATAACAAGAGTTGGTTGTATTGGA  793

seq1  AGTTTGGGATTTAGGAACAGAAAGAAGGATATTATGTAGTCATATTATAA  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGGATTTAGGAACAGAAAGAAGGATATTATGTAGTCATATTATAA  843

seq1  CAGTCTTTGAAGGTTTTATACTTATTAACTTATTTTAATCTTATGCACCT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTGAAGGTTTTATACTTATTAACTTATTTTAATCTTATGCACCT  893

seq1  TGGTTTTCTGCCTGGATATAAGTCTGTATTAAGATGACAGATTTTAACTC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTCTGCCTGGATATAAGTCTGTATTAAGATGACAGATTTTAACTC  943

seq1  CATTATAAACAGTTGTGAGCTGCCACCTGAGTGCTGAGAATTAAACAATG  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAAACAGTTGTGAGCTGCCACCTGAGTGCTGAGAATTAAACAATG  993

seq1  GTCCTTTGGAAGAGTAGCCAGTGTTTTTCCTTGCAGAGTCTTCTCTCCAG  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTGGAAGAGTAGCCAGTGTTTTTCCTTGCAGAGTCTTCTCTCCAG  1043

seq1  CTCCTTTATTATAATCTTAATGAAATTAAATTCAAAGACATCAAATGGTT  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTATTATAATCTTAATGAAATTAAATTCAAAGACATCAAATGGTT  1093

seq1  GCCACTGAACCATGATTATTTCTTCATCTTGAGTTGGTATAGATTAAGGC  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGAACCATGATTATTTCTTCATCTTGAGTTGGTATAGATTAAGGC  1143

seq1  TTATGCATGTACTCTGCTCCCTTTAGACATGAGAGAATTC  1177
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCATGTACTCTGCTCCCTTTAGACATGAGAGAATTC  1183


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