BAC Information

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BAC

Clone NameB6Ng01-219G15
Chromosome15 (Build37)
Map Location 97,403,383 - 97,597,639
singlet/doubletdoublet
Overlap geneD15Ertd682e, Pp11r, Rapgef3
Upstream geneSlc38a1, Slc38a2, LOC667941, LOC546651, Slc38a4, Amigo2, BC038822, LOC100043354, LOC100042774
Downstream gene4930570C03Rik, Hdac7a, Vdr, Tmem106c, Col2a1, Senp1, Pfkm, Asb8, AI836003, Olfr288, LOC634104, EG629524, H1fnt, Zfp641, Olfr285, Olfr284, Olfr283, 1700031M16Rik, LOC100042818, Olfr282, LOC629549, Olfr281, Olfr240-ps1, GA_x5J8B7W76D0-7895713-7896429, Lalba, Olfr234, Olfr278-ps1, 2310037I24Rik, LOC100043418, Ccnt1, 4930415O20Rik, Adcy6, Cacnb3, Ddx23, Rnd1, Ccdc65, Fkbp11, Arf3, 5830427D03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219G15.bB6Ng01-219G15.g
ACCGA035257GA035258
length1,176523
definitionB6Ng01-219G15.b B6Ng01-219G15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,403,383 - 97,404,571)(97,597,112 - 97,597,639)
sequence
gaattcaactggaccacagttctacccgcttcaggattcaccccagagag
ttaccttgtcctgcatccccagaatgtctcctcaccccagagagaccgct
aggtccctcccatgttaaaatcagaaagtctccaggaagtggtatgtggt
gaccttagggaccgtgtcatttgtttccttatctcggggacactagtcct
ccacagctttagggtctgtaccctgaaaactgttgtttcgtcattttgct
gaactgctgtttcaggaaagagggtgattcagtttcactgctcattaggg
gctgtctggaagttccatggactctactcattttctttaaactcttaaaa
atgtcttgatgtgcacaatagactacatcaccggtttatttatagatagt
agctaacaacactgagaaatggttccatgtgaaacgtctgtgctttttct
accatttcctctagcattcaaacaaaagcctttcttgaagcaagatcttt
caattaaacaaacaaacaaatgaaaataaaacggcacatccttcttctat
ccttcttccaggagcatgtatatttggggagagtcagtcattggctcttc
agctcttacccaaacacttaagaagtcaagacacattgaggtcaccctgt
tataagcaacagaaagtgcaataaatagacttcagccataaagggagttc
actgtgcacatagctgaacagtctcggggagaggggtctagcaccgcatg
agcaagacctcaaaggtgctctcttcctcctccctcttcctcctccactt
cctcctcctctccactttccacaacccatccctctgttgacactgtcctc
agacaagtgccgcctgcctttaggactctcagaaagctatcagcaacagg
gctatgtccatcattatgattcagtaagggacacgaaagattggcttggg
agttttctgctgaagaagccaagtgccacagcagcacaggaaatgccctt
cttgtctcttgtgactcgctgaattaagctctgtagtgatgatgtgactg
gtcacctgactgcatctgaaacaactcaagacagcatctgggcaccagca
tcttggcaggctgtgagagccttcccgaagggataactgattggggagaa
cctgtagcacttggggtagcaccttc
cagccagaactgagaagagccccatcgttgtgagttgagtggagacccct
aggtgcgccaagccagcaggacccggggcaggtcttcctgtccctccccc
ggctcctggcagggttgccgcacctccgcatgaccagtccaagtccagag
gacgctaagccaggggtggtagtggggaggtccagctcctccggccgatg
gctgtcctctttcctccccacatcacaggtcagctggccaggtgagaacc
actggcaggtgggcccagctgtggtggagagtccagctgtgggggcaccg
caggtgggaggtctcccggacgtggttccggagggcacgctgctcaatat
ggtgttgaagagaatgcaccgtccccgctgctgctcttaccagctagtgt
tcgagcaccggcgccccatctgcatccagggactccgctgggtgagtacc
ggccatctgccaggctgggtcagggctggaagagtcgggattgtagtgct
ggtgggccatgcagcttttctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_97403383_97404571
seq2: B6Ng01-219G15.b_45_1220

seq1  GAATTCAACTGGACCACAGTTCTACCCGCTTCAGGATTCACCCCAGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTGGACCACAGTTCTACCCGCTTCAGGATTCACCCCAGAGAG  50

seq1  TTACCTTGTCCTGCATCCCCAGAATGTCTCCTCACCCCAGAGAGACCGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTGTCCTGCATCCCCAGAATGTCTCCTCACCCCAGAGAGACCGCT  100

seq1  AGGTCCCTCCCATGTTAAAATCAGAAAGTCTCCAGGAAGTGGTATGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCTCCCATGTTAAAATCAGAAAGTCTCCAGGAAGTGGTATGTGGT  150

seq1  GACCTTAGGGACCGTGTCATTTGTTTCCTTATCTCGGGGACACTAGTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTAGGGACCGTGTCATTTGTTTCCTTATCTCGGGGACACTAGTCCT  200

seq1  CCACAGCTTTAGGGTCTGTACCCTGAAAACTGTTGTTTCGTCATTTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCTTTAGGGTCTGTACCCTGAAAACTGTTGTTTCGTCATTTTGCT  250

seq1  GAACTGCTGTTTCAGGAAAGAGGGTGATTCAGTTTCACTGCTCATTAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCTGTTTCAGGAAAGAGGGTGATTCAGTTTCACTGCTCATTAGGG  300

seq1  GCTGTCTGGAAGTTCCATGGACTCTACTCATTTTCTTTAAACTCTTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTGGAAGTTCCATGGACTCTACTCATTTTCTTTAAACTCTTAAAA  350

seq1  ATGTCTTGATGTGCACAATAGACTACATCACCGGTTTATTTATAGATAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTGATGTGCACAATAGACTACATCACCGGTTTATTTATAGATAGT  400

seq1  AGCTAACAACACTGAGAAATGGTTCCATGTGAAACGTCTGTGCTTTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAACAACACTGAGAAATGGTTCCATGTGAAACGTCTGTGCTTTTTCT  450

seq1  ACCATTTCCTCTAGCATTCAAACAAAAGCCTTTCTTGAAGCAAGATCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTCCTCTAGCATTCAAACAAAAGCCTTTCTTGAAGCAAGATCTTT  500

seq1  CAATTAAACAAACAAACAAATGAAAATAAAACGGCACATCCTTCTTCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAAACAAACAAACAAATGAAAATAAAACGGCACATCCTTCTTCTAT  550

seq1  CCTTCTTCCAGGAGCATGTATATTTGGGGAGAGTCAGTCATTGGCTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTCCAGGAGCATGTATATTTGGGGAGAGTCAGTCATTGGCTCTTC  600

seq1  AGCTCTTACCCAAACACTTAAGAAGTCAAGACACATTGAGGTCACCCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTACCCAAACACTTAAGAAGTCAAGACACATTGAGGTCACCCTGT  650

seq1  TATAAGCAACAGAAAGTGCAATAAATAGACTTCAGCCATAAAGGGAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCAACAGAAAGTGCAATAAATAGACTTCAGCCATAAAGGGAGTTC  700

seq1  ACTGTGCACATAGCTGAACAGTCTCGGGGAGAGGGGTCTAGCACCGCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCACATAGCTGAACAGTCTCGGGGAGAGGGGTCTAGCACCGCATG  750

seq1  AGCAAGACCTC-AAGGTGCTCTCTTCCTCCTCCCTCTTCCTCCTCCACTT  799
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGACCTCAAAGGTGCTCTCTTCCTCCTCCCTCTTCCTCCTCCACTT  800

seq1  CCTCCTCCTCTCCACTTTCCACAACCCATCCCTCTGTTGACACTGTCCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTCTCCACTTTCCACAACCCATCCCTCTGTTGACACTGTCCTC  850

seq1  AGACAAGTGCCGCCTGCCTTTAGGACTCTCAGAAAGCTATCAGCAACAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGTGCCGCCTGCCTTTAGGACTCTCAGAAAGCTATCAGCAACAGG  900

seq1  GCTATGTCCATCATTATGATTCAGTAAGGGACACGAAAGATTGCCTTGGG  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCTATGTCCATCATTATGATTCAGTAAGGGACACGAAAGATTGGCTTGGG  950

seq1  AGTTTTCTGCTGAAGAAGCCAAGTGCCACCAGCAGCACCAGGAAATGCCC  999
      |||||||||||||||||||||||||||| |||||||| ||||||||| ||
seq2  AGTTTTCTGCTGAAGAAGCCAAGTGCCA-CAGCAGCA-CAGGAAATG-CC  997

seq1  CTTCTTGTCTCCTTGTGACTCGCTGAATTAAGCTCTGTAGTGGTTGATGT  1049
      |||||||||| |||||||||||||||||||||||||||||| | ||||| 
seq2  CTTCTTGTCT-CTTGTGACTCGCTGAATTAAGCTCTGTAGT-GATGATG-  1044

seq1  TGACT-GTCACCTTGACTGCATCTGAAAACAACCTCAGGACCAGCATCTG  1098
      ||||| |||||| |||||||||||| |||||| |||| || |||||||||
seq2  TGACTGGTCACC-TGACTGCATCTG-AAACAA-CTCAAGA-CAGCATCTG  1090

seq1  GGCACCAGCATCTGGGCAGGCCTGTGAGGGCCTTCCCGAGAGGGATAACT  1148
      ||||||||||||| |||||| ||||||| |||||||||| ||||||||||
seq2  GGCACCAGCATCTTGGCAGG-CTGTGAGAGCCTTCCCGA-AGGGATAACT  1138

seq1  GAATGGGGGAAGACCCTTGTAGCATTGTGGGTAGCACCTTC  1189
      || |||||  ||| || ||||||| |  |||||||||||||
seq2  GATTGGGG--AGAACC-TGTAGCACTTGGGGTAGCACCTTC  1176

seq1: chr15_97597112_97597639
seq2: B6Ng01-219G15.g_67_595 (reverse)

seq1  GGAG-AAAGCTGCCTGGCCCACCAGCACTACAATCCCGACTCTTCCAGCC  49
      |||| |||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAAGCTGCATGGCCCACCAGCACTACAATCCCGACTCTTCCAGCC  50

seq1  CTGACCCAGCCTGGCAGATGGCCGGTACTCACCCAGCGGAGTCCCTGGAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCAGCCTGGCAGATGGCCGGTACTCACCCAGCGGAGTCCCTGGAT  100

seq1  GCAGCTGGGGCGCCGGTGCTCGAACACTAGCTGGTAAGAGCAGCAGCGGG  149
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGGGGCGCCGGTGCTCGAACACTAGCTGGTAAGAGCAGCAGCGGG  150

seq1  GACGGTGCATTCTCTTCAACACCATATTGAGCAGCGTGCCCTCCGGAACC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGTGCATTCTCTTCAACACCATATTGAGCAGCGTGCCCTCCGGAACC  200

seq1  ACGTCCGGGAGACCTCCCACCTGCGGTGCCCCCACAGCTGGACTCTCCAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCCGGGAGACCTCCCACCTGCGGTGCCCCCACAGCTGGACTCTCCAC  250

seq1  CACAGCTGGGCCCACCTGCCAGTGGTTCTCACCTGGCCAGCTGACCTGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTGGGCCCACCTGCCAGTGGTTCTCACCTGGCCAGCTGACCTGTG  300

seq1  ATGTGGGGAGGAAAGAGGACAGCCATCGGCCGGAGGAGCTGGACCTCCCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGGAGGAAAGAGGACAGCCATCGGCCGGAGGAGCTGGACCTCCCC  350

seq1  ACTACCACCCCTGGCTTAGCGTCCTCTGGACTTGGACTGGTCATGCGGAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCACCCCTGGCTTAGCGTCCTCTGGACTTGGACTGGTCATGCGGAG  400

seq1  GTGCGGCAACCCTGCCAGGAGCCGGGGGAGGGACAGGAAGACCTGCCCCG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGGCAACCCTGCCAGGAGCCGGGGGAGGGACAGGAAGACCTGCCCCG  450

seq1  GGTCCTGCTGGCTTGGCGCACCTAGGGGTCTCCACTCAACTCACAACGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGCTGGCTTGGCGCACCTAGGGGTCTCCACTCAACTCACAACGAT  500

seq1  GGGGCTCTTCTCAGTTCTGGCTGGAATTC  528
      |||||||||||||||||||||||||||||
seq2  GGGGCTCTTCTCAGTTCTGGCTGGAATTC  529